Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16050 and AO356_16055 are separated by 327 nucleotides AO356_16055 and AO356_16060 overlap by 4 nucleotides
AO356_16050: AO356_16050 - glucose-6-phosphate isomerase, at 3,629,285 to 3,630,949
_16050
AO356_16055: AO356_16055 - pantoate--beta-alanine ligase, at 3,631,277 to 3,632,137
_16055
AO356_16060: AO356_16060 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,632,134 to 3,632,934
_16060
Position (kb)
3631
3632
3633 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3630.578 kb on - strand, within AO356_16050 at 3630.943 kb on - strand at 3630.968 kb on + strand at 3630.987 kb on - strand at 3630.987 kb on - strand at 3631.062 kb on + strand at 3631.062 kb on + strand at 3631.062 kb on + strand at 3631.063 kb on - strand at 3631.067 kb on + strand at 3631.067 kb on + strand at 3631.067 kb on + strand at 3631.067 kb on + strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.125 kb on + strand at 3631.125 kb on + strand at 3631.126 kb on - strand at 3631.126 kb on - strand at 3632.192 kb on + strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.487 kb on - strand, within AO356_16060 at 3632.487 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.667 kb on - strand, within AO356_16060 at 3632.735 kb on + strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.949 kb on + strand at 3632.949 kb on + strand at 3632.991 kb on - strand at 3632.991 kb on - strand at 3632.991 kb on - strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.996 kb on + strand at 3633.011 kb on + strand at 3633.011 kb on + strand at 3633.011 kb on + strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.027 kb on - strand at 3633.027 kb on - strand at 3633.027 kb on - strand at 3633.048 kb on - strand at 3633.048 kb on - strand at 3633.048 kb on - strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.078 kb on + strand at 3633.078 kb on + strand at 3633.078 kb on + strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 3,630,578 - AO356_16050 0.78 -1.3 3,630,943 - -3.1 3,630,968 + -0.7 3,630,987 - +0.4 3,630,987 - +0.0 3,631,062 + -1.0 3,631,062 + -2.2 3,631,062 + -0.6 3,631,063 - -0.4 3,631,067 + -3.3 3,631,067 + +0.3 3,631,067 + -2.3 3,631,067 + -0.2 3,631,068 - +0.2 3,631,068 - +0.7 3,631,068 - -1.0 3,631,068 - -0.8 3,631,068 - -0.6 3,631,068 - +0.2 3,631,125 + -0.5 3,631,125 + -0.3 3,631,126 - -0.6 3,631,126 - +1.0 3,632,192 + -1.1 3,632,193 - -1.2 3,632,193 - -1.2 3,632,193 - -1.5 3,632,193 - -1.6 3,632,193 - -1.8 3,632,193 - -1.9 3,632,193 - -1.1 3,632,193 - -0.4 3,632,193 - -1.3 3,632,487 - AO356_16060 0.44 -2.6 3,632,487 - AO356_16060 0.44 -1.3 3,632,500 - AO356_16060 0.46 -1.6 3,632,500 - AO356_16060 0.46 -0.4 3,632,500 - AO356_16060 0.46 -0.4 3,632,667 - AO356_16060 0.67 -1.3 3,632,735 + AO356_16060 0.75 +0.3 3,632,736 - AO356_16060 0.75 -0.9 3,632,736 - AO356_16060 0.75 -1.7 3,632,736 - AO356_16060 0.75 -1.1 3,632,862 - +0.9 3,632,862 - -1.6 3,632,862 - -0.6 3,632,862 - +1.5 3,632,862 - -1.3 3,632,926 - -2.0 3,632,926 - -1.7 3,632,926 - -0.7 3,632,926 - -0.3 3,632,926 - -1.0 3,632,926 - -0.9 3,632,926 - -1.6 3,632,949 + +1.9 3,632,949 + -0.6 3,632,991 - -0.0 3,632,991 - -0.9 3,632,991 - +0.2 3,632,994 + -0.9 3,632,994 + -1.3 3,632,994 + -0.1 3,632,994 + -0.8 3,632,994 + -1.2 3,632,995 - +1.0 3,632,995 - -0.2 3,632,995 - -0.6 3,632,995 - +0.1 3,632,995 - -0.5 3,632,995 - -0.6 3,632,995 - +0.3 3,632,995 - -0.9 3,632,995 - -0.2 3,632,995 - -1.0 3,632,995 - -0.7 3,632,996 + -0.9 3,633,011 + -0.3 3,633,011 + +1.4 3,633,011 + -0.7 3,633,012 - +0.2 3,633,012 - -0.2 3,633,012 - -0.2 3,633,012 - +0.3 3,633,012 - -1.0 3,633,026 + +0.4 3,633,026 + -2.2 3,633,026 + +0.7 3,633,026 + -1.1 3,633,026 + -0.7 3,633,026 + -2.3 3,633,027 - +0.9 3,633,027 - -1.1 3,633,027 - +0.8 3,633,048 - -0.5 3,633,048 - -0.8 3,633,048 - +0.1 3,633,076 + +0.1 3,633,076 + -1.4 3,633,076 + -1.4 3,633,076 + -1.4 3,633,076 + -1.1 3,633,077 - +0.0 3,633,077 - +0.2 3,633,077 - -0.9 3,633,077 - -0.6 3,633,077 - +0.3 3,633,078 + -1.3 3,633,078 + -1.2 3,633,078 + -0.1 3,633,079 - -0.5 3,633,079 - +0.4 3,633,079 - -0.6 3,633,079 - -1.9 3,633,079 - +0.1 3,633,079 - -1.6
Or see this region's nucleotide sequence