Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09700 and AO356_09705 are separated by 328 nucleotides AO356_09705 and AO356_09710 are separated by 120 nucleotides AO356_09710 and AO356_09715 are separated by 190 nucleotides
AO356_09700: AO356_09700 - tRNA s(4)U8 sulfurtransferase, at 2,201,884 to 2,203,338
_09700
AO356_09705: AO356_09705 - glutamine synthetase, at 2,203,667 to 2,205,073
_09705
AO356_09710: AO356_09710 - chorismate mutase, at 2,205,194 to 2,205,757
_09710
AO356_09715: AO356_09715 - hypothetical protein, at 2,205,948 to 2,206,466
_09715
Position (kb)
2203
2204
2205
2206 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2203.384 kb on - strand at 2203.384 kb on - strand at 2203.384 kb on - strand at 2203.386 kb on - strand at 2203.484 kb on + strand at 2203.507 kb on - strand at 2203.515 kb on - strand at 2203.515 kb on - strand at 2203.515 kb on - strand at 2203.515 kb on - strand at 2203.515 kb on - strand at 2203.515 kb on - strand at 2203.600 kb on + strand at 2203.600 kb on + strand at 2203.600 kb on + strand at 2203.600 kb on + strand at 2203.621 kb on + strand at 2203.621 kb on + strand at 2203.621 kb on + strand at 2203.625 kb on + strand at 2203.625 kb on + strand at 2203.625 kb on + strand at 2205.104 kb on + strand at 2205.104 kb on + strand at 2205.148 kb on + strand at 2205.148 kb on + strand at 2205.176 kb on + strand at 2205.176 kb on + strand at 2205.176 kb on + strand at 2205.177 kb on - strand at 2205.177 kb on - strand at 2205.346 kb on + strand, within AO356_09710 at 2205.346 kb on + strand, within AO356_09710 at 2205.346 kb on + strand, within AO356_09710 at 2205.347 kb on - strand, within AO356_09710 at 2205.347 kb on - strand, within AO356_09710 at 2205.347 kb on - strand, within AO356_09710 at 2205.347 kb on - strand, within AO356_09710 at 2205.347 kb on - strand, within AO356_09710 at 2205.428 kb on + strand, within AO356_09710 at 2205.428 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.474 kb on + strand, within AO356_09710 at 2205.475 kb on - strand, within AO356_09710 at 2205.475 kb on - strand, within AO356_09710 at 2205.475 kb on - strand, within AO356_09710 at 2205.475 kb on - strand, within AO356_09710 at 2205.475 kb on - strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.497 kb on + strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.498 kb on - strand, within AO356_09710 at 2205.739 kb on + strand at 2205.739 kb on + strand at 2205.739 kb on + strand at 2205.739 kb on + strand at 2205.739 kb on + strand at 2205.740 kb on - strand at 2205.740 kb on - strand at 2205.740 kb on - strand at 2205.740 kb on - strand at 2205.740 kb on - strand at 2205.740 kb on - strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.909 kb on + strand at 2205.910 kb on - strand at 2205.910 kb on - strand at 2205.910 kb on - strand at 2205.947 kb on + strand at 2205.948 kb on - strand at 2206.011 kb on + strand, within AO356_09715 at 2206.011 kb on + strand, within AO356_09715 at 2206.011 kb on + strand, within AO356_09715 at 2206.011 kb on + strand, within AO356_09715 at 2206.011 kb on + strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.012 kb on - strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.017 kb on + strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.018 kb on - strand, within AO356_09715 at 2206.045 kb on - strand, within AO356_09715
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,203,384 - +0.0 2,203,384 - +0.7 2,203,384 - +0.1 2,203,386 - -0.2 2,203,484 + +0.9 2,203,507 - -0.7 2,203,515 - -2.1 2,203,515 - +0.0 2,203,515 - -1.9 2,203,515 - -1.2 2,203,515 - -1.0 2,203,515 - -0.7 2,203,600 + +0.4 2,203,600 + -0.5 2,203,600 + +0.1 2,203,600 + -1.0 2,203,621 + -1.2 2,203,621 + -0.5 2,203,621 + +0.4 2,203,625 + -0.7 2,203,625 + -0.2 2,203,625 + -0.9 2,205,104 + +1.2 2,205,104 + -2.0 2,205,148 + +0.2 2,205,148 + +0.5 2,205,176 + -0.2 2,205,176 + +0.1 2,205,176 + +2.1 2,205,177 - +0.3 2,205,177 - -1.2 2,205,346 + AO356_09710 0.27 -0.2 2,205,346 + AO356_09710 0.27 -0.2 2,205,346 + AO356_09710 0.27 -0.1 2,205,347 - AO356_09710 0.27 -1.4 2,205,347 - AO356_09710 0.27 -0.5 2,205,347 - AO356_09710 0.27 +0.1 2,205,347 - AO356_09710 0.27 +0.8 2,205,347 - AO356_09710 0.27 -0.0 2,205,428 + AO356_09710 0.41 -0.5 2,205,428 + AO356_09710 0.41 -0.3 2,205,474 + AO356_09710 0.50 +0.6 2,205,474 + AO356_09710 0.50 +0.5 2,205,474 + AO356_09710 0.50 +0.5 2,205,474 + AO356_09710 0.50 -0.2 2,205,474 + AO356_09710 0.50 +0.5 2,205,474 + AO356_09710 0.50 +0.9 2,205,474 + AO356_09710 0.50 -0.2 2,205,475 - AO356_09710 0.50 -0.2 2,205,475 - AO356_09710 0.50 +0.9 2,205,475 - AO356_09710 0.50 -1.6 2,205,475 - AO356_09710 0.50 +0.5 2,205,475 - AO356_09710 0.50 -1.4 2,205,497 + AO356_09710 0.54 +0.7 2,205,497 + AO356_09710 0.54 +0.7 2,205,497 + AO356_09710 0.54 +0.2 2,205,497 + AO356_09710 0.54 -1.1 2,205,497 + AO356_09710 0.54 +0.3 2,205,497 + AO356_09710 0.54 +0.1 2,205,497 + AO356_09710 0.54 -0.0 2,205,497 + AO356_09710 0.54 -0.3 2,205,498 - AO356_09710 0.54 +0.4 2,205,498 - AO356_09710 0.54 -1.1 2,205,498 - AO356_09710 0.54 +0.5 2,205,498 - AO356_09710 0.54 +2.1 2,205,498 - AO356_09710 0.54 -0.5 2,205,498 - AO356_09710 0.54 -0.9 2,205,498 - AO356_09710 0.54 -0.1 2,205,739 + +0.2 2,205,739 + -0.0 2,205,739 + -0.5 2,205,739 + +1.5 2,205,739 + +0.5 2,205,740 - -0.1 2,205,740 - +0.2 2,205,740 - +1.1 2,205,740 - +0.5 2,205,740 - +1.6 2,205,740 - +0.1 2,205,909 + +1.6 2,205,909 + -1.2 2,205,909 + -0.4 2,205,909 + +1.0 2,205,909 + +0.2 2,205,909 + -0.6 2,205,909 + +0.2 2,205,909 + +0.4 2,205,909 + -0.2 2,205,909 + -0.8 2,205,909 + -0.3 2,205,910 - +0.3 2,205,910 - -0.1 2,205,910 - +0.3 2,205,947 + -0.5 2,205,948 - +0.6 2,206,011 + AO356_09715 0.12 -2.1 2,206,011 + AO356_09715 0.12 -0.5 2,206,011 + AO356_09715 0.12 +0.1 2,206,011 + AO356_09715 0.12 +0.3 2,206,011 + AO356_09715 0.12 +1.0 2,206,012 - AO356_09715 0.12 +1.1 2,206,012 - AO356_09715 0.12 +0.5 2,206,012 - AO356_09715 0.12 -0.2 2,206,012 - AO356_09715 0.12 +0.5 2,206,012 - AO356_09715 0.12 +0.3 2,206,012 - AO356_09715 0.12 +0.3 2,206,012 - AO356_09715 0.12 +1.4 2,206,017 + AO356_09715 0.13 +0.8 2,206,017 + AO356_09715 0.13 +0.6 2,206,017 + AO356_09715 0.13 -0.2 2,206,017 + AO356_09715 0.13 +0.9 2,206,017 + AO356_09715 0.13 +0.4 2,206,017 + AO356_09715 0.13 +0.1 2,206,017 + AO356_09715 0.13 -0.2 2,206,017 + AO356_09715 0.13 -0.4 2,206,017 + AO356_09715 0.13 -0.0 2,206,017 + AO356_09715 0.13 +0.5 2,206,018 - AO356_09715 0.13 -0.7 2,206,018 - AO356_09715 0.13 +0.1 2,206,018 - AO356_09715 0.13 +0.8 2,206,018 - AO356_09715 0.13 +0.1 2,206,018 - AO356_09715 0.13 -0.2 2,206,018 - AO356_09715 0.13 +0.7 2,206,018 - AO356_09715 0.13 -0.1 2,206,018 - AO356_09715 0.13 +0.6 2,206,045 - AO356_09715 0.19 +0.0
Or see this region's nucleotide sequence