Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07850 and AO356_07855 overlap by 4 nucleotides AO356_07855 and AO356_07860 are separated by 11 nucleotides
AO356_07850: AO356_07850 - hypothetical protein, at 1,753,106 to 1,754,410
_07850
AO356_07855: AO356_07855 - hypothetical protein, at 1,754,407 to 1,755,468
_07855
AO356_07860: AO356_07860 - hypothetical protein, at 1,755,480 to 1,756,442
_07860
Position (kb)
1754
1755
1756 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1753.465 kb on + strand, within AO356_07850 at 1753.465 kb on + strand, within AO356_07850 at 1753.465 kb on + strand, within AO356_07850 at 1753.467 kb on + strand, within AO356_07850 at 1753.468 kb on - strand, within AO356_07850 at 1753.618 kb on - strand, within AO356_07850 at 1753.618 kb on - strand, within AO356_07850 at 1753.656 kb on + strand, within AO356_07850 at 1753.656 kb on + strand, within AO356_07850 at 1753.656 kb on + strand, within AO356_07850 at 1753.657 kb on - strand, within AO356_07850 at 1753.657 kb on - strand, within AO356_07850 at 1753.693 kb on - strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.716 kb on + strand, within AO356_07850 at 1753.717 kb on - strand, within AO356_07850 at 1753.752 kb on + strand, within AO356_07850 at 1753.818 kb on + strand, within AO356_07850 at 1753.818 kb on + strand, within AO356_07850 at 1753.818 kb on + strand, within AO356_07850 at 1753.819 kb on - strand, within AO356_07850 at 1753.912 kb on + strand, within AO356_07850 at 1753.912 kb on + strand, within AO356_07850 at 1753.913 kb on - strand, within AO356_07850 at 1753.918 kb on + strand, within AO356_07850 at 1753.918 kb on + strand, within AO356_07850 at 1753.918 kb on + strand, within AO356_07850 at 1753.919 kb on - strand, within AO356_07850 at 1753.919 kb on - strand, within AO356_07850 at 1753.919 kb on - strand, within AO356_07850 at 1753.919 kb on - strand, within AO356_07850 at 1753.924 kb on + strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.925 kb on - strand, within AO356_07850 at 1753.985 kb on + strand, within AO356_07850 at 1753.986 kb on - strand, within AO356_07850 at 1753.986 kb on - strand, within AO356_07850 at 1754.196 kb on + strand, within AO356_07850 at 1754.235 kb on + strand, within AO356_07850 at 1754.236 kb on - strand, within AO356_07850 at 1754.280 kb on + strand at 1754.280 kb on + strand at 1754.280 kb on + strand at 1754.280 kb on + strand at 1754.281 kb on - strand at 1754.281 kb on - strand at 1754.281 kb on - strand at 1754.281 kb on - strand at 1754.338 kb on + strand at 1754.338 kb on + strand at 1754.339 kb on - strand at 1754.370 kb on + strand at 1754.371 kb on - strand at 1754.401 kb on + strand at 1754.403 kb on + strand at 1754.403 kb on + strand at 1754.403 kb on + strand at 1754.403 kb on + strand at 1754.404 kb on - strand at 1754.404 kb on - strand at 1754.404 kb on - strand at 1754.404 kb on - strand at 1754.404 kb on - strand at 1754.448 kb on + strand at 1754.458 kb on - strand at 1754.472 kb on + strand at 1754.473 kb on - strand at 1754.479 kb on - strand at 1754.479 kb on - strand at 1754.530 kb on - strand, within AO356_07855 at 1754.530 kb on - strand, within AO356_07855 at 1754.530 kb on - strand, within AO356_07855 at 1754.530 kb on - strand, within AO356_07855 at 1754.531 kb on + strand, within AO356_07855 at 1754.531 kb on + strand, within AO356_07855 at 1754.531 kb on + strand, within AO356_07855 at 1754.532 kb on - strand, within AO356_07855 at 1754.532 kb on - strand, within AO356_07855 at 1754.532 kb on - strand, within AO356_07855 at 1754.634 kb on - strand, within AO356_07855 at 1754.732 kb on + strand, within AO356_07855 at 1754.732 kb on + strand, within AO356_07855 at 1754.732 kb on + strand, within AO356_07855 at 1754.733 kb on - strand, within AO356_07855 at 1754.733 kb on - strand, within AO356_07855 at 1754.733 kb on - strand, within AO356_07855 at 1754.733 kb on - strand, within AO356_07855 at 1754.809 kb on + strand, within AO356_07855 at 1754.810 kb on - strand, within AO356_07855 at 1754.810 kb on - strand, within AO356_07855 at 1754.900 kb on + strand, within AO356_07855 at 1754.900 kb on + strand, within AO356_07855 at 1754.900 kb on + strand, within AO356_07855 at 1754.900 kb on + strand, within AO356_07855 at 1754.901 kb on - strand, within AO356_07855 at 1754.901 kb on - strand, within AO356_07855 at 1754.901 kb on - strand, within AO356_07855 at 1754.901 kb on - strand, within AO356_07855 at 1754.961 kb on - strand, within AO356_07855 at 1754.961 kb on - strand, within AO356_07855 at 1754.966 kb on + strand, within AO356_07855 at 1754.967 kb on - strand, within AO356_07855 at 1754.967 kb on - strand, within AO356_07855 at 1754.988 kb on - strand, within AO356_07855 at 1754.988 kb on - strand, within AO356_07855 at 1755.080 kb on + strand, within AO356_07855 at 1755.080 kb on + strand, within AO356_07855 at 1755.080 kb on + strand, within AO356_07855 at 1755.080 kb on + strand, within AO356_07855 at 1755.081 kb on - strand, within AO356_07855 at 1755.081 kb on - strand, within AO356_07855 at 1755.081 kb on - strand, within AO356_07855 at 1755.206 kb on + strand, within AO356_07855 at 1755.206 kb on + strand, within AO356_07855 at 1755.206 kb on + strand, within AO356_07855 at 1755.207 kb on - strand, within AO356_07855 at 1755.207 kb on - strand, within AO356_07855 at 1755.222 kb on - strand, within AO356_07855 at 1755.238 kb on + strand, within AO356_07855 at 1755.238 kb on + strand, within AO356_07855 at 1755.238 kb on + strand, within AO356_07855 at 1755.239 kb on - strand, within AO356_07855 at 1755.239 kb on - strand, within AO356_07855 at 1755.239 kb on - strand, within AO356_07855 at 1755.329 kb on + strand, within AO356_07855 at 1755.329 kb on + strand, within AO356_07855 at 1755.329 kb on + strand, within AO356_07855 at 1755.330 kb on - strand, within AO356_07855 at 1755.330 kb on - strand, within AO356_07855 at 1755.342 kb on - strand, within AO356_07855 at 1755.462 kb on + strand at 1755.462 kb on + strand at 1755.462 kb on + strand at 1755.468 kb on + strand at 1755.468 kb on + strand at 1755.468 kb on + strand at 1755.468 kb on + strand at 1755.469 kb on - strand at 1755.469 kb on - strand at 1755.482 kb on - strand at 1755.517 kb on + strand at 1755.517 kb on + strand at 1755.517 kb on + strand at 1755.517 kb on + strand at 1755.517 kb on + strand at 1755.518 kb on - strand at 1755.518 kb on - strand at 1755.518 kb on - strand at 1755.518 kb on - strand at 1755.518 kb on - strand at 1755.518 kb on - strand at 1755.641 kb on + strand, within AO356_07860 at 1755.642 kb on - strand, within AO356_07860 at 1755.642 kb on - strand, within AO356_07860 at 1755.642 kb on - strand, within AO356_07860 at 1755.642 kb on - strand, within AO356_07860 at 1755.797 kb on - strand, within AO356_07860 at 1755.797 kb on - strand, within AO356_07860 at 1755.851 kb on - strand, within AO356_07860 at 1755.852 kb on + strand, within AO356_07860 at 1755.852 kb on + strand, within AO356_07860 at 1755.853 kb on - strand, within AO356_07860 at 1755.853 kb on - strand, within AO356_07860 at 1755.875 kb on + strand, within AO356_07860 at 1755.917 kb on + strand, within AO356_07860 at 1755.917 kb on + strand, within AO356_07860 at 1755.917 kb on + strand, within AO356_07860 at 1755.918 kb on - strand, within AO356_07860 at 1755.939 kb on + strand, within AO356_07860 at 1755.948 kb on - strand, within AO356_07860 at 1755.976 kb on + strand, within AO356_07860 at 1756.038 kb on - strand, within AO356_07860 at 1756.116 kb on + strand, within AO356_07860 at 1756.117 kb on - strand, within AO356_07860 at 1756.178 kb on - strand, within AO356_07860 at 1756.178 kb on - strand, within AO356_07860 at 1756.178 kb on - strand, within AO356_07860 at 1756.178 kb on - strand, within AO356_07860 at 1756.178 kb on - strand, within AO356_07860 at 1756.231 kb on + strand, within AO356_07860 at 1756.231 kb on + strand, within AO356_07860 at 1756.232 kb on - strand, within AO356_07860 at 1756.232 kb on - strand, within AO356_07860 at 1756.232 kb on - strand, within AO356_07860 at 1756.266 kb on + strand, within AO356_07860 at 1756.311 kb on - strand, within AO356_07860 at 1756.311 kb on - strand, within AO356_07860 at 1756.311 kb on - strand, within AO356_07860 at 1756.312 kb on + strand, within AO356_07860 at 1756.313 kb on - strand, within AO356_07860 at 1756.427 kb on + strand at 1756.428 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,753,465 + AO356_07850 0.28 -0.0 1,753,465 + AO356_07850 0.28 -0.0 1,753,465 + AO356_07850 0.28 -1.9 1,753,467 + AO356_07850 0.28 -0.0 1,753,468 - AO356_07850 0.28 +0.6 1,753,618 - AO356_07850 0.39 +0.3 1,753,618 - AO356_07850 0.39 +0.5 1,753,656 + AO356_07850 0.42 -1.3 1,753,656 + AO356_07850 0.42 -1.0 1,753,656 + AO356_07850 0.42 -0.8 1,753,657 - AO356_07850 0.42 -0.1 1,753,657 - AO356_07850 0.42 -0.3 1,753,693 - AO356_07850 0.45 +1.0 1,753,716 + AO356_07850 0.47 -0.8 1,753,716 + AO356_07850 0.47 -0.1 1,753,716 + AO356_07850 0.47 +0.1 1,753,716 + AO356_07850 0.47 -0.3 1,753,716 + AO356_07850 0.47 -0.6 1,753,716 + AO356_07850 0.47 -1.3 1,753,716 + AO356_07850 0.47 +0.1 1,753,717 - AO356_07850 0.47 -0.9 1,753,752 + AO356_07850 0.50 -0.3 1,753,818 + AO356_07850 0.55 -0.6 1,753,818 + AO356_07850 0.55 +0.1 1,753,818 + AO356_07850 0.55 +0.8 1,753,819 - AO356_07850 0.55 +0.8 1,753,912 + AO356_07850 0.62 -0.0 1,753,912 + AO356_07850 0.62 -0.8 1,753,913 - AO356_07850 0.62 -0.5 1,753,918 + AO356_07850 0.62 -0.1 1,753,918 + AO356_07850 0.62 +0.3 1,753,918 + AO356_07850 0.62 -0.7 1,753,919 - AO356_07850 0.62 +0.9 1,753,919 - AO356_07850 0.62 +0.2 1,753,919 - AO356_07850 0.62 -0.1 1,753,919 - AO356_07850 0.62 +0.1 1,753,924 + AO356_07850 0.63 -1.0 1,753,925 - AO356_07850 0.63 +0.9 1,753,925 - AO356_07850 0.63 +0.4 1,753,925 - AO356_07850 0.63 -1.1 1,753,925 - AO356_07850 0.63 -0.3 1,753,925 - AO356_07850 0.63 +0.5 1,753,925 - AO356_07850 0.63 +0.4 1,753,925 - AO356_07850 0.63 -0.1 1,753,925 - AO356_07850 0.63 -0.4 1,753,925 - AO356_07850 0.63 +0.6 1,753,985 + AO356_07850 0.67 -0.5 1,753,986 - AO356_07850 0.67 -0.0 1,753,986 - AO356_07850 0.67 -0.2 1,754,196 + AO356_07850 0.84 -0.0 1,754,235 + AO356_07850 0.87 -0.4 1,754,236 - AO356_07850 0.87 -0.6 1,754,280 + -0.5 1,754,280 + -0.2 1,754,280 + -0.6 1,754,280 + -0.4 1,754,281 - -0.9 1,754,281 - -0.7 1,754,281 - +0.3 1,754,281 - -1.0 1,754,338 + -0.6 1,754,338 + +0.4 1,754,339 - +0.2 1,754,370 + -0.2 1,754,371 - -0.6 1,754,401 + +0.1 1,754,403 + -0.8 1,754,403 + -0.5 1,754,403 + -1.0 1,754,403 + +0.4 1,754,404 - +0.4 1,754,404 - -0.4 1,754,404 - -0.2 1,754,404 - +0.0 1,754,404 - -1.4 1,754,448 + -0.8 1,754,458 - +0.6 1,754,472 + -1.8 1,754,473 - -1.4 1,754,479 - +1.0 1,754,479 - -0.5 1,754,530 - AO356_07855 0.12 +0.2 1,754,530 - AO356_07855 0.12 -0.2 1,754,530 - AO356_07855 0.12 -0.4 1,754,530 - AO356_07855 0.12 +0.2 1,754,531 + AO356_07855 0.12 -0.2 1,754,531 + AO356_07855 0.12 -1.5 1,754,531 + AO356_07855 0.12 -0.1 1,754,532 - AO356_07855 0.12 -0.1 1,754,532 - AO356_07855 0.12 +0.0 1,754,532 - AO356_07855 0.12 +0.1 1,754,634 - AO356_07855 0.21 -0.0 1,754,732 + AO356_07855 0.31 +0.1 1,754,732 + AO356_07855 0.31 -0.0 1,754,732 + AO356_07855 0.31 -0.9 1,754,733 - AO356_07855 0.31 +0.4 1,754,733 - AO356_07855 0.31 +0.9 1,754,733 - AO356_07855 0.31 +0.6 1,754,733 - AO356_07855 0.31 +1.0 1,754,809 + AO356_07855 0.38 -0.9 1,754,810 - AO356_07855 0.38 +0.4 1,754,810 - AO356_07855 0.38 +0.1 1,754,900 + AO356_07855 0.46 -0.6 1,754,900 + AO356_07855 0.46 -0.4 1,754,900 + AO356_07855 0.46 -0.0 1,754,900 + AO356_07855 0.46 -1.2 1,754,901 - AO356_07855 0.47 +0.4 1,754,901 - AO356_07855 0.47 +0.1 1,754,901 - AO356_07855 0.47 -0.3 1,754,901 - AO356_07855 0.47 +0.2 1,754,961 - AO356_07855 0.52 +0.5 1,754,961 - AO356_07855 0.52 -0.7 1,754,966 + AO356_07855 0.53 -2.1 1,754,967 - AO356_07855 0.53 +0.5 1,754,967 - AO356_07855 0.53 +0.3 1,754,988 - AO356_07855 0.55 +0.6 1,754,988 - AO356_07855 0.55 -0.0 1,755,080 + AO356_07855 0.63 -0.8 1,755,080 + AO356_07855 0.63 -0.3 1,755,080 + AO356_07855 0.63 +0.1 1,755,080 + AO356_07855 0.63 -0.1 1,755,081 - AO356_07855 0.63 -0.1 1,755,081 - AO356_07855 0.63 -0.9 1,755,081 - AO356_07855 0.63 +2.4 1,755,206 + AO356_07855 0.75 -0.0 1,755,206 + AO356_07855 0.75 +0.3 1,755,206 + AO356_07855 0.75 -0.8 1,755,207 - AO356_07855 0.75 +0.5 1,755,207 - AO356_07855 0.75 +0.3 1,755,222 - AO356_07855 0.77 +0.5 1,755,238 + AO356_07855 0.78 +1.1 1,755,238 + AO356_07855 0.78 -2.4 1,755,238 + AO356_07855 0.78 -0.8 1,755,239 - AO356_07855 0.78 -0.8 1,755,239 - AO356_07855 0.78 -0.2 1,755,239 - AO356_07855 0.78 -0.2 1,755,329 + AO356_07855 0.87 -0.1 1,755,329 + AO356_07855 0.87 -0.6 1,755,329 + AO356_07855 0.87 -1.1 1,755,330 - AO356_07855 0.87 +0.7 1,755,330 - AO356_07855 0.87 +0.8 1,755,342 - AO356_07855 0.88 +1.9 1,755,462 + -1.1 1,755,462 + -0.4 1,755,462 + -1.1 1,755,468 + +0.1 1,755,468 + -0.8 1,755,468 + -1.6 1,755,468 + +0.3 1,755,469 - -0.8 1,755,469 - +0.2 1,755,482 - +0.4 1,755,517 + +0.4 1,755,517 + -0.1 1,755,517 + -1.4 1,755,517 + -0.2 1,755,517 + -0.2 1,755,518 - +0.3 1,755,518 - -1.0 1,755,518 - +0.4 1,755,518 - +1.1 1,755,518 - -0.6 1,755,518 - +0.1 1,755,641 + AO356_07860 0.17 +0.1 1,755,642 - AO356_07860 0.17 +0.3 1,755,642 - AO356_07860 0.17 -0.9 1,755,642 - AO356_07860 0.17 -0.1 1,755,642 - AO356_07860 0.17 +0.0 1,755,797 - AO356_07860 0.33 +0.3 1,755,797 - AO356_07860 0.33 +0.5 1,755,851 - AO356_07860 0.39 -0.0 1,755,852 + AO356_07860 0.39 -0.3 1,755,852 + AO356_07860 0.39 -1.1 1,755,853 - AO356_07860 0.39 -1.2 1,755,853 - AO356_07860 0.39 -0.3 1,755,875 + AO356_07860 0.41 +1.0 1,755,917 + AO356_07860 0.45 -0.3 1,755,917 + AO356_07860 0.45 -0.2 1,755,917 + AO356_07860 0.45 -0.5 1,755,918 - AO356_07860 0.45 +0.5 1,755,939 + AO356_07860 0.48 -0.0 1,755,948 - AO356_07860 0.49 -0.6 1,755,976 + AO356_07860 0.52 +0.4 1,756,038 - AO356_07860 0.58 -0.0 1,756,116 + AO356_07860 0.66 -0.4 1,756,117 - AO356_07860 0.66 -0.2 1,756,178 - AO356_07860 0.72 +0.3 1,756,178 - AO356_07860 0.72 -0.3 1,756,178 - AO356_07860 0.72 +0.4 1,756,178 - AO356_07860 0.72 +0.5 1,756,178 - AO356_07860 0.72 +0.8 1,756,231 + AO356_07860 0.78 -1.6 1,756,231 + AO356_07860 0.78 -1.8 1,756,232 - AO356_07860 0.78 -0.3 1,756,232 - AO356_07860 0.78 +0.1 1,756,232 - AO356_07860 0.78 +0.5 1,756,266 + AO356_07860 0.82 -1.0 1,756,311 - AO356_07860 0.86 +0.1 1,756,311 - AO356_07860 0.86 +0.4 1,756,311 - AO356_07860 0.86 +0.4 1,756,312 + AO356_07860 0.86 -0.5 1,756,313 - AO356_07860 0.87 +0.1 1,756,427 + +0.4 1,756,428 - +0.3
Or see this region's nucleotide sequence