Strain Fitness in Shewanella loihica PV-4 around Shew_2372
Experiment: Motility M4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Motility M4 |
---|---|---|---|---|---|
remove | |||||
2,773,707 | + | Shew_2371 | 0.57 | -1.4 | |
2,773,900 | - | Shew_2371 | 0.69 | -0.4 | |
2,774,095 | + | Shew_2371 | 0.80 | +0.2 | |
2,774,163 | - | Shew_2371 | 0.84 | +0.1 | |
2,774,542 | - | Shew_2372 | 0.35 | -1.2 | |
2,774,731 | - | -3.2 | |||
2,774,772 | + | +1.1 | |||
2,774,984 | + | +0.1 | |||
2,775,213 | - | Shew_2373 | 0.31 | +0.5 | |
2,775,316 | - | Shew_2373 | 0.48 | +0.8 | |
2,775,562 | + | Shew_2373 | 0.86 | +0.3 | |
2,775,570 | - | Shew_2373 | 0.88 | +1.6 | |
2,775,570 | - | Shew_2373 | 0.88 | -0.1 |
Or see this region's nucleotide sequence