Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3584 and Dshi_3585 are separated by 8 nucleotides Dshi_3585 and Dshi_3586 overlap by 4 nucleotides Dshi_3586 and Dshi_3587 are separated by 13 nucleotides
Dshi_3584: Dshi_3584 - RNA polymerase, sigma 54 subunit, RpoN (RefSeq), at 3,774,813 to 3,776,129
_3584
Dshi_3585: Dshi_3585 - ABC transporter related (RefSeq), at 3,776,138 to 3,776,902
_3585
Dshi_3586: Dshi_3586 - Cell envelope biogenesis YhbN (RefSeq), at 3,776,899 to 3,777,411
_3586
Dshi_3587: Dshi_3587 - hypothetical protein (RefSeq), at 3,777,425 to 3,778,027
_3587
Position (kb)
3776
3777 Strain fitness (log2 ratio)
-2
-1
0
1 at 3775.138 kb on + strand, within Dshi_3584 at 3775.181 kb on - strand, within Dshi_3584 at 3775.196 kb on - strand, within Dshi_3584 at 3775.296 kb on + strand, within Dshi_3584 at 3775.334 kb on - strand, within Dshi_3584 at 3775.512 kb on - strand, within Dshi_3584 at 3775.610 kb on + strand, within Dshi_3584 at 3775.618 kb on - strand, within Dshi_3584 at 3775.664 kb on + strand, within Dshi_3584 at 3775.707 kb on - strand, within Dshi_3584 at 3775.731 kb on + strand, within Dshi_3584 at 3775.834 kb on - strand, within Dshi_3584 at 3775.866 kb on - strand, within Dshi_3584 at 3775.905 kb on - strand, within Dshi_3584 at 3775.915 kb on - strand, within Dshi_3584 at 3775.923 kb on - strand, within Dshi_3584 at 3775.940 kb on - strand, within Dshi_3584 at 3776.136 kb on + strand at 3776.916 kb on + strand at 3777.435 kb on + strand at 3777.443 kb on - strand at 3777.464 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0005 mg/ml remove 3,775,138 + Dshi_3584 0.25 -0.4 3,775,181 - Dshi_3584 0.28 -1.0 3,775,196 - Dshi_3584 0.29 -0.7 3,775,296 + Dshi_3584 0.37 +0.1 3,775,334 - Dshi_3584 0.40 -0.7 3,775,512 - Dshi_3584 0.53 -0.7 3,775,610 + Dshi_3584 0.61 -0.0 3,775,618 - Dshi_3584 0.61 -0.2 3,775,664 + Dshi_3584 0.65 +0.0 3,775,707 - Dshi_3584 0.68 -0.2 3,775,731 + Dshi_3584 0.70 +1.4 3,775,834 - Dshi_3584 0.78 -1.0 3,775,866 - Dshi_3584 0.80 -0.6 3,775,905 - Dshi_3584 0.83 +0.7 3,775,915 - Dshi_3584 0.84 +1.2 3,775,923 - Dshi_3584 0.84 +0.0 3,775,940 - Dshi_3584 0.86 +0.0 3,776,136 + +0.4 3,776,916 + -0.4 3,777,435 + +0.0 3,777,443 - -0.8 3,777,464 - -2.6
Or see this region's nucleotide sequence