Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2877 and Dshi_2878 are separated by 203 nucleotides Dshi_2878 and Dshi_2879 are separated by 129 nucleotides Dshi_2879 and Dshi_2880 overlap by 4 nucleotides
Dshi_2877: Dshi_2877 - hypothetical protein (RefSeq), at 3,031,039 to 3,032,007
_2877
Dshi_2878: Dshi_2878 - succinyl-CoA synthetase, beta subunit (RefSeq), at 3,032,211 to 3,033,404
_2878
Dshi_2879: Dshi_2879 - hypothetical protein (RefSeq), at 3,033,534 to 3,034,235
_2879
Dshi_2880: Dshi_2880 - hypothetical protein (RefSeq), at 3,034,232 to 3,034,780
_2880
Position (kb)
3032
3033
3034 Strain fitness (log2 ratio)
-2
-1
0
1 at 3031.258 kb on - strand, within Dshi_2877 at 3031.271 kb on + strand, within Dshi_2877 at 3031.279 kb on - strand, within Dshi_2877 at 3031.319 kb on - strand, within Dshi_2877 at 3031.369 kb on + strand, within Dshi_2877 at 3031.451 kb on + strand, within Dshi_2877 at 3031.488 kb on + strand, within Dshi_2877 at 3031.502 kb on - strand, within Dshi_2877 at 3031.560 kb on + strand, within Dshi_2877 at 3031.560 kb on + strand, within Dshi_2877 at 3031.629 kb on - strand, within Dshi_2877 at 3031.631 kb on + strand, within Dshi_2877 at 3031.673 kb on + strand, within Dshi_2877 at 3031.681 kb on - strand, within Dshi_2877 at 3031.697 kb on + strand, within Dshi_2877 at 3031.717 kb on + strand, within Dshi_2877 at 3031.737 kb on + strand, within Dshi_2877 at 3031.742 kb on + strand, within Dshi_2877 at 3031.810 kb on + strand, within Dshi_2877 at 3031.810 kb on + strand, within Dshi_2877 at 3031.821 kb on + strand, within Dshi_2877 at 3031.821 kb on + strand, within Dshi_2877 at 3031.865 kb on - strand, within Dshi_2877 at 3031.873 kb on - strand, within Dshi_2877 at 3031.891 kb on - strand, within Dshi_2877 at 3031.892 kb on + strand, within Dshi_2877 at 3031.892 kb on + strand, within Dshi_2877 at 3031.902 kb on + strand, within Dshi_2877 at 3031.902 kb on + strand, within Dshi_2877 at 3031.902 kb on + strand, within Dshi_2877 at 3031.902 kb on + strand, within Dshi_2877 at 3031.910 kb on - strand, within Dshi_2877 at 3031.910 kb on - strand, within Dshi_2877 at 3031.910 kb on - strand, within Dshi_2877 at 3031.969 kb on - strand at 3031.982 kb on + strand at 3032.056 kb on - strand at 3032.056 kb on - strand at 3032.094 kb on + strand at 3033.871 kb on + strand, within Dshi_2879
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0005 mg/ml remove 3,031,258 - Dshi_2877 0.23 -0.4 3,031,271 + Dshi_2877 0.24 -1.8 3,031,279 - Dshi_2877 0.25 -0.5 3,031,319 - Dshi_2877 0.29 +0.4 3,031,369 + Dshi_2877 0.34 -1.0 3,031,451 + Dshi_2877 0.43 +0.5 3,031,488 + Dshi_2877 0.46 +1.3 3,031,502 - Dshi_2877 0.48 +0.4 3,031,560 + Dshi_2877 0.54 -0.4 3,031,560 + Dshi_2877 0.54 -0.5 3,031,629 - Dshi_2877 0.61 +0.4 3,031,631 + Dshi_2877 0.61 +1.2 3,031,673 + Dshi_2877 0.65 -0.9 3,031,681 - Dshi_2877 0.66 -0.0 3,031,697 + Dshi_2877 0.68 +0.3 3,031,717 + Dshi_2877 0.70 -0.1 3,031,737 + Dshi_2877 0.72 +0.1 3,031,742 + Dshi_2877 0.73 -0.0 3,031,810 + Dshi_2877 0.80 +0.3 3,031,810 + Dshi_2877 0.80 -0.2 3,031,821 + Dshi_2877 0.81 +0.2 3,031,821 + Dshi_2877 0.81 -0.2 3,031,865 - Dshi_2877 0.85 -0.8 3,031,873 - Dshi_2877 0.86 -0.2 3,031,891 - Dshi_2877 0.88 -1.3 3,031,892 + Dshi_2877 0.88 -0.6 3,031,892 + Dshi_2877 0.88 +0.3 3,031,902 + Dshi_2877 0.89 +0.1 3,031,902 + Dshi_2877 0.89 +0.1 3,031,902 + Dshi_2877 0.89 +0.3 3,031,902 + Dshi_2877 0.89 +0.4 3,031,910 - Dshi_2877 0.90 +0.2 3,031,910 - Dshi_2877 0.90 +0.2 3,031,910 - Dshi_2877 0.90 +0.5 3,031,969 - -0.3 3,031,982 + -0.1 3,032,056 - +0.4 3,032,056 - +0.0 3,032,094 + +0.2 3,033,871 + Dshi_2879 0.48 +0.6
Or see this region's nucleotide sequence