Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2683 and Dshi_2684 are separated by 81 nucleotides Dshi_2684 and Dshi_2685 are separated by 394 nucleotides Dshi_2685 and Dshi_2686 are separated by 302 nucleotides Dshi_2686 and Dshi_2687 are separated by 226 nucleotides
Dshi_2683: Dshi_2683 - Aldose 1-epimerase (RefSeq), at 2,843,824 to 2,844,828
_2683
Dshi_2684: Dshi_2684 - Hydroxyisourate hydrolase (RefSeq), at 2,844,910 to 2,845,275
_2684
Dshi_2685: Dshi_2685 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (RefSeq), at 2,845,670 to 2,846,659
_2685
Dshi_2686: Dshi_2686 - UspA domain protein (RefSeq), at 2,846,962 to 2,847,378
_2686
Dshi_2687: Dshi_2687 - pseudoazurin (RefSeq), at 2,847,605 to 2,848,090
_2687
Position (kb)
2845
2846
2847 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2844.786 kb on - strand at 2844.882 kb on + strand at 2844.901 kb on + strand at 2845.262 kb on - strand at 2845.339 kb on - strand at 2845.555 kb on - strand at 2845.586 kb on - strand at 2845.666 kb on - strand at 2845.808 kb on - strand, within Dshi_2685 at 2845.818 kb on - strand, within Dshi_2685 at 2845.827 kb on - strand, within Dshi_2685 at 2845.832 kb on - strand, within Dshi_2685 at 2845.856 kb on - strand, within Dshi_2685 at 2845.982 kb on - strand, within Dshi_2685 at 2846.097 kb on + strand, within Dshi_2685 at 2846.128 kb on + strand, within Dshi_2685 at 2846.222 kb on + strand, within Dshi_2685 at 2846.245 kb on - strand, within Dshi_2685 at 2846.294 kb on + strand, within Dshi_2685 at 2846.567 kb on + strand at 2846.580 kb on - strand at 2846.957 kb on + strand at 2846.964 kb on - strand at 2846.989 kb on + strand at 2847.050 kb on - strand, within Dshi_2686 at 2847.056 kb on + strand, within Dshi_2686 at 2847.100 kb on + strand, within Dshi_2686 at 2847.158 kb on + strand, within Dshi_2686 at 2847.171 kb on - strand, within Dshi_2686 at 2847.202 kb on - strand, within Dshi_2686 at 2847.240 kb on + strand, within Dshi_2686 at 2847.240 kb on + strand, within Dshi_2686 at 2847.647 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0005 mg/ml remove 2,844,786 - -0.5 2,844,882 + +0.2 2,844,901 + +0.5 2,845,262 - +1.2 2,845,339 - -0.4 2,845,555 - +0.1 2,845,586 - +0.6 2,845,666 - +0.8 2,845,808 - Dshi_2685 0.14 +0.1 2,845,818 - Dshi_2685 0.15 -0.6 2,845,827 - Dshi_2685 0.16 -0.0 2,845,832 - Dshi_2685 0.16 -0.4 2,845,856 - Dshi_2685 0.19 -0.4 2,845,982 - Dshi_2685 0.32 -0.3 2,846,097 + Dshi_2685 0.43 -0.2 2,846,128 + Dshi_2685 0.46 -0.0 2,846,222 + Dshi_2685 0.56 -0.4 2,846,245 - Dshi_2685 0.58 +0.4 2,846,294 + Dshi_2685 0.63 +0.4 2,846,567 + +1.0 2,846,580 - +1.6 2,846,957 + -2.9 2,846,964 - +0.2 2,846,989 + -1.1 2,847,050 - Dshi_2686 0.21 +2.0 2,847,056 + Dshi_2686 0.23 +0.7 2,847,100 + Dshi_2686 0.33 -0.6 2,847,158 + Dshi_2686 0.47 -0.0 2,847,171 - Dshi_2686 0.50 -0.3 2,847,202 - Dshi_2686 0.58 +0.3 2,847,240 + Dshi_2686 0.67 -1.2 2,847,240 + Dshi_2686 0.67 -1.4 2,847,647 - -1.1
Or see this region's nucleotide sequence