Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2192 and Dshi_2193 are separated by 28 nucleotides Dshi_2193 and Dshi_2194 are separated by 160 nucleotides Dshi_2194 and Dshi_2195 are separated by 269 nucleotides
Dshi_2192: Dshi_2192 - excinuclease ABC, B subunit (RefSeq), at 2,319,332 to 2,321,509
_2192
Dshi_2193: Dshi_2193 - hypothetical protein (RefSeq), at 2,321,538 to 2,321,693
_2193
Dshi_2194: Dshi_2194 - hypothetical protein (RefSeq), at 2,321,854 to 2,322,237
_2194
Dshi_2195: Dshi_2195 - Entericidin EcnAB (RefSeq), at 2,322,507 to 2,322,644
_2195
Position (kb)
2321
2322 Strain fitness (log2 ratio)
-1
0
1 at 2320.583 kb on - strand, within Dshi_2192 at 2320.741 kb on + strand, within Dshi_2192 at 2320.796 kb on - strand, within Dshi_2192 at 2320.806 kb on + strand, within Dshi_2192 at 2320.820 kb on - strand, within Dshi_2192 at 2320.844 kb on - strand, within Dshi_2192 at 2320.854 kb on - strand, within Dshi_2192 at 2320.891 kb on + strand, within Dshi_2192 at 2320.896 kb on + strand, within Dshi_2192 at 2320.904 kb on - strand, within Dshi_2192 at 2320.916 kb on + strand, within Dshi_2192 at 2320.924 kb on - strand, within Dshi_2192 at 2320.970 kb on + strand, within Dshi_2192 at 2321.132 kb on + strand, within Dshi_2192 at 2321.187 kb on + strand, within Dshi_2192 at 2321.364 kb on - strand at 2321.442 kb on - strand at 2321.715 kb on + strand at 2321.736 kb on + strand at 2321.758 kb on + strand at 2321.868 kb on + strand at 2321.936 kb on + strand, within Dshi_2194 at 2321.936 kb on + strand, within Dshi_2194 at 2321.954 kb on - strand, within Dshi_2194 at 2321.959 kb on - strand, within Dshi_2194 at 2322.065 kb on + strand, within Dshi_2194 at 2322.197 kb on + strand, within Dshi_2194 at 2322.197 kb on + strand, within Dshi_2194 at 2322.231 kb on + strand at 2322.236 kb on + strand at 2322.239 kb on - strand at 2322.257 kb on - strand at 2322.267 kb on + strand at 2322.277 kb on + strand at 2322.301 kb on + strand at 2322.301 kb on + strand at 2322.309 kb on - strand at 2322.390 kb on + strand at 2322.429 kb on - strand at 2322.458 kb on + strand at 2322.494 kb on - strand at 2322.566 kb on - strand, within Dshi_2195 at 2322.635 kb on - strand at 2322.658 kb on - strand at 2322.670 kb on - strand at 2322.684 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.0005 mg/ml remove 2,320,583 - Dshi_2192 0.57 -0.6 2,320,741 + Dshi_2192 0.65 +0.3 2,320,796 - Dshi_2192 0.67 -0.0 2,320,806 + Dshi_2192 0.68 -0.4 2,320,820 - Dshi_2192 0.68 +0.9 2,320,844 - Dshi_2192 0.69 +0.4 2,320,854 - Dshi_2192 0.70 +1.0 2,320,891 + Dshi_2192 0.72 -0.8 2,320,896 + Dshi_2192 0.72 -1.0 2,320,904 - Dshi_2192 0.72 -0.9 2,320,916 + Dshi_2192 0.73 +0.4 2,320,924 - Dshi_2192 0.73 -0.4 2,320,970 + Dshi_2192 0.75 +0.9 2,321,132 + Dshi_2192 0.83 -0.5 2,321,187 + Dshi_2192 0.85 -0.1 2,321,364 - -0.7 2,321,442 - -0.1 2,321,715 + -0.5 2,321,736 + +0.5 2,321,758 + +0.1 2,321,868 + +0.5 2,321,936 + Dshi_2194 0.21 +0.6 2,321,936 + Dshi_2194 0.21 +0.9 2,321,954 - Dshi_2194 0.26 +1.2 2,321,959 - Dshi_2194 0.27 +0.0 2,322,065 + Dshi_2194 0.55 -0.1 2,322,197 + Dshi_2194 0.89 +0.2 2,322,197 + Dshi_2194 0.89 -1.7 2,322,231 + -1.0 2,322,236 + -0.1 2,322,239 - +1.5 2,322,257 - -0.4 2,322,267 + -0.3 2,322,277 + -0.0 2,322,301 + +0.4 2,322,301 + +0.2 2,322,309 - +0.1 2,322,390 + +0.9 2,322,429 - +0.1 2,322,458 + -0.4 2,322,494 - -0.1 2,322,566 - Dshi_2195 0.43 -0.3 2,322,635 - -0.1 2,322,658 - -1.2 2,322,670 - -0.2 2,322,684 - +1.2
Or see this region's nucleotide sequence