Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1394
Experiment: m.b. Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,445,501 | - | Dshi_1392 | 0.82 | +0.9 | |
1,445,511 | - | Dshi_1392 | 0.84 | -0.1 | |
1,445,573 | + | -0.2 | |||
1,445,600 | - | -0.5 | |||
1,445,632 | + | +0.6 | |||
1,445,683 | - | Dshi_1393 | 0.13 | +0.1 | |
1,445,724 | + | Dshi_1393 | 0.20 | -0.0 | |
1,445,816 | - | Dshi_1393 | 0.35 | +0.3 | |
1,445,846 | - | Dshi_1393 | 0.40 | +0.5 | |
1,445,978 | - | Dshi_1393 | 0.63 | -0.6 | |
1,446,025 | + | Dshi_1393 | 0.71 | +0.0 | |
1,446,033 | - | Dshi_1393 | 0.72 | -0.3 | |
1,446,093 | - | Dshi_1393 | 0.82 | -0.3 | |
1,446,158 | + | -0.1 | |||
1,446,436 | - | Dshi_1394 | 0.11 | -0.1 | |
1,446,459 | + | Dshi_1394 | 0.14 | -1.1 | |
1,446,523 | + | Dshi_1394 | 0.24 | -0.2 | |
1,446,553 | - | Dshi_1394 | 0.28 | -0.2 | |
1,446,553 | - | Dshi_1394 | 0.28 | -1.8 | |
1,446,708 | + | Dshi_1394 | 0.51 | +0.1 | |
1,446,722 | - | Dshi_1394 | 0.53 | -0.8 | |
1,446,826 | - | Dshi_1394 | 0.69 | -0.5 | |
1,447,100 | - | +0.3 |
Or see this region's nucleotide sequence