Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1040
Experiment: MoYLS4 with Nitrite 0.025mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nitrite 0.025mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,142,159 | + | -0.4 | |||
| 1,142,220 | - | +0.3 | |||
| 1,142,302 | - | DVU1039 | 0.16 | +0.5 | |
| 1,142,586 | + | DVU1039 | 0.60 | +0.1 | |
| 1,142,618 | + | DVU1039 | 0.65 | +1.0 | |
| 1,142,621 | - | DVU1039 | 0.66 | +0.1 | |
| 1,142,660 | - | DVU1039 | 0.72 | +0.0 | |
| 1,143,234 | - | hisB | DVU1040 | 0.65 | +0.4 |
| 1,143,284 | + | hisB | DVU1040 | 0.73 | -1.2 |
| 1,143,343 | + | hisB | DVU1040 | 0.83 | -0.9 |
| 1,143,370 | + | hisB | DVU1040 | 0.87 | +1.2 |
| 1,143,370 | + | hisB | DVU1040 | 0.87 | -0.7 |
| 1,143,462 | + | +1.0 | |||
| 1,143,483 | - | -0.6 | |||
| 1,143,497 | + | -0.7 |
Or see this region's nucleotide sequence