Experiment: No vitamins t2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS04445 and HSERO_RS04450 are separated by 8 nucleotides HSERO_RS04450 and HSERO_RS04455 are separated by 59 nucleotides HSERO_RS04455 and HSERO_RS04460 are separated by 54 nucleotides HSERO_RS04460 and HSERO_RS04465 are separated by 58 nucleotides HSERO_RS04465 and HSERO_RS04470 are separated by 2 nucleotides
HSERO_RS04445: HSERO_RS04445 - hypothetical protein, at 981,229 to 981,342
_RS04445
HSERO_RS04450: HSERO_RS04450 - hypothetical protein, at 981,351 to 981,674
_RS04450
HSERO_RS04455: HSERO_RS04455 - major tail tube protein, at 981,734 to 982,243
_RS04455
HSERO_RS04460: HSERO_RS04460 - tail sheath protein, at 982,298 to 983,473
_RS04460
HSERO_RS04465: HSERO_RS04465 - tail fiber assembly protein, at 983,532 to 983,804
_RS04465
HSERO_RS04470: HSERO_RS04470 - hypothetical protein, at 983,807 to 984,481
_RS04470
Position (kb) 982
983
984 Strain fitness (log2 ratio) -1
0
1
2 at 981.322 kb on - strand, within HSERO_RS04445 at 981.324 kb on - strand, within HSERO_RS04445 at 981.450 kb on - strand, within HSERO_RS04450 at 981.841 kb on + strand, within HSERO_RS04455 at 981.891 kb on + strand, within HSERO_RS04455 at 981.899 kb on - strand, within HSERO_RS04455 at 981.997 kb on + strand, within HSERO_RS04455 at 982.170 kb on - strand, within HSERO_RS04455 at 982.217 kb on - strand at 982.218 kb on - strand at 982.251 kb on - strand at 982.303 kb on - strand at 982.331 kb on + strand at 982.553 kb on - strand, within HSERO_RS04460 at 982.640 kb on + strand, within HSERO_RS04460 at 982.665 kb on + strand, within HSERO_RS04460 at 982.726 kb on - strand at 982.752 kb on + strand, within HSERO_RS04460 at 982.817 kb on - strand, within HSERO_RS04460 at 982.945 kb on + strand, within HSERO_RS04460 at 983.066 kb on - strand, within HSERO_RS04460 at 983.223 kb on + strand, within HSERO_RS04460 at 983.291 kb on - strand, within HSERO_RS04460 at 983.292 kb on + strand, within HSERO_RS04460 at 983.300 kb on - strand, within HSERO_RS04460 at 983.300 kb on - strand, within HSERO_RS04460 at 983.336 kb on + strand, within HSERO_RS04460 at 983.813 kb on - strand at 983.929 kb on + strand, within HSERO_RS04470 at 983.929 kb on + strand, within HSERO_RS04470 at 983.941 kb on + strand at 984.021 kb on + strand, within HSERO_RS04470 at 984.359 kb on + strand, within HSERO_RS04470 at 984.372 kb on - strand, within HSERO_RS04470
Per-strain Table
Position Strand Gene LocusTag Fraction No vitamins t2 remove 981,322 - HSERO_RS04445 0.82 +0.3 981,324 - HSERO_RS04445 0.83 -0.8 981,450 - HSERO_RS04450 0.31 +0.0 981,841 + HSERO_RS04455 0.21 -0.3 981,891 + HSERO_RS04455 0.31 -0.4 981,899 - HSERO_RS04455 0.32 -0.1 981,997 + HSERO_RS04455 0.52 +0.4 982,170 - HSERO_RS04455 0.85 +2.0 982,217 - +0.5 982,218 - +0.1 982,251 - -1.3 982,303 - +0.2 982,331 + -0.2 982,553 - HSERO_RS04460 0.22 +0.9 982,640 + HSERO_RS04460 0.29 +0.4 982,665 + HSERO_RS04460 0.31 +0.9 982,726 - +0.9 982,752 + HSERO_RS04460 0.39 +0.4 982,817 - HSERO_RS04460 0.44 -1.1 982,945 + HSERO_RS04460 0.55 +0.9 983,066 - HSERO_RS04460 0.65 +0.9 983,223 + HSERO_RS04460 0.79 -0.1 983,291 - HSERO_RS04460 0.84 -0.9 983,292 + HSERO_RS04460 0.85 +0.6 983,300 - HSERO_RS04460 0.85 +0.3 983,300 - HSERO_RS04460 0.85 -1.1 983,336 + HSERO_RS04460 0.88 +1.0 983,813 - +0.3 983,929 + HSERO_RS04470 0.18 -0.3 983,929 + HSERO_RS04470 0.18 +0.9 983,941 + -0.1 984,021 + HSERO_RS04470 0.32 +0.1 984,359 + HSERO_RS04470 0.82 +0.8 984,372 - HSERO_RS04470 0.84 +0.3
Or see this region's nucleotide sequence