Experiment: No vitamins t2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02625 and HSERO_RS02630 are separated by 266 nucleotides HSERO_RS02630 and HSERO_RS02635 are separated by 2 nucleotides HSERO_RS02635 and HSERO_RS02640 are separated by 70 nucleotides
HSERO_RS02625: HSERO_RS02625 - hypothetical protein, at 575,012 to 576,406
_RS02625
HSERO_RS02630: HSERO_RS02630 - membrane protein, at 576,673 to 577,254
_RS02630
HSERO_RS02635: HSERO_RS02635 - LysR family transcriptional regulator, at 577,257 to 578,177
_RS02635
HSERO_RS02640: HSERO_RS02640 - dihydrofolate reductase, at 578,248 to 579,201
_RS02640
Position (kb) 576
577
578 Strain fitness (log2 ratio) -2
-1
0
1 at 575.726 kb on - strand, within HSERO_RS02625 at 575.747 kb on - strand, within HSERO_RS02625 at 575.878 kb on + strand, within HSERO_RS02625 at 575.885 kb on + strand, within HSERO_RS02625 at 575.949 kb on + strand, within HSERO_RS02625 at 575.962 kb on - strand, within HSERO_RS02625 at 576.051 kb on + strand, within HSERO_RS02625 at 576.059 kb on - strand, within HSERO_RS02625 at 576.131 kb on + strand, within HSERO_RS02625 at 576.418 kb on - strand at 576.451 kb on + strand at 576.451 kb on + strand at 576.459 kb on - strand at 576.908 kb on + strand, within HSERO_RS02630 at 576.971 kb on - strand, within HSERO_RS02630 at 577.095 kb on - strand, within HSERO_RS02630 at 577.203 kb on - strand at 577.278 kb on + strand at 577.363 kb on + strand, within HSERO_RS02635 at 577.464 kb on - strand, within HSERO_RS02635 at 577.595 kb on + strand, within HSERO_RS02635 at 577.620 kb on - strand, within HSERO_RS02635 at 577.646 kb on - strand, within HSERO_RS02635 at 577.652 kb on + strand, within HSERO_RS02635 at 577.660 kb on - strand, within HSERO_RS02635 at 577.693 kb on - strand, within HSERO_RS02635 at 577.946 kb on + strand, within HSERO_RS02635 at 577.992 kb on + strand, within HSERO_RS02635 at 577.994 kb on + strand, within HSERO_RS02635 at 578.197 kb on - strand at 578.235 kb on + strand at 578.243 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No vitamins t2 remove 575,726 - HSERO_RS02625 0.51 -0.3 575,747 - HSERO_RS02625 0.53 +0.5 575,878 + HSERO_RS02625 0.62 +1.5 575,885 + HSERO_RS02625 0.63 -0.2 575,949 + HSERO_RS02625 0.67 +0.4 575,962 - HSERO_RS02625 0.68 +1.3 576,051 + HSERO_RS02625 0.74 +0.6 576,059 - HSERO_RS02625 0.75 +0.4 576,131 + HSERO_RS02625 0.80 +0.1 576,418 - +0.5 576,451 + +1.3 576,451 + -0.6 576,459 - -0.4 576,908 + HSERO_RS02630 0.40 -1.6 576,971 - HSERO_RS02630 0.51 -1.7 577,095 - HSERO_RS02630 0.73 -1.5 577,203 - -2.0 577,278 + +0.3 577,363 + HSERO_RS02635 0.12 +0.2 577,464 - HSERO_RS02635 0.22 +1.5 577,595 + HSERO_RS02635 0.37 -1.2 577,620 - HSERO_RS02635 0.39 -1.2 577,646 - HSERO_RS02635 0.42 +0.4 577,652 + HSERO_RS02635 0.43 +0.2 577,660 - HSERO_RS02635 0.44 +0.4 577,693 - HSERO_RS02635 0.47 -1.4 577,946 + HSERO_RS02635 0.75 +0.7 577,992 + HSERO_RS02635 0.80 -0.8 577,994 + HSERO_RS02635 0.80 +0.4 578,197 - -0.6 578,235 + +0.4 578,243 - -2.4
Or see this region's nucleotide sequence