Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3686

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,795,758	+		Ga0059261_3684	0.52	+0.6
3,795,758	+		Ga0059261_3684	0.52	-1.7
3,795,758	+		Ga0059261_3684	0.52	-1.0
3,795,759	-		Ga0059261_3684	0.52	-2.1
3,795,759	-		Ga0059261_3684	0.52	+0.4
3,795,780	-		Ga0059261_3684	0.58	-2.2
3,795,780	-		Ga0059261_3684	0.58	+0.9
3,795,821	+		Ga0059261_3684	0.70	+2.1
3,795,932	-				+1.1
3,795,932	-				-0.6
3,796,159	+		Ga0059261_3685	0.30	-1.2
3,796,159	+		Ga0059261_3685	0.30	-0.9
3,796,159	+		Ga0059261_3685	0.30	-1.9
3,796,159	+		Ga0059261_3685	0.30	-0.5
3,796,159	+		Ga0059261_3685	0.30	+0.6
3,796,159	+		Ga0059261_3685	0.30	+2.1
3,796,159	+		Ga0059261_3685	0.30	+0.5
3,796,159	+		Ga0059261_3685	0.30	-1.7
3,796,159	+		Ga0059261_3685	0.30	-0.1
3,796,159	+		Ga0059261_3685	0.30	+2.1
3,796,159	+		Ga0059261_3685	0.30	-0.8
3,796,159	+				+0.2
3,796,159	+		Ga0059261_3685	0.30	+0.2
3,796,160	-		Ga0059261_3685	0.30	-1.1
3,796,160	-		Ga0059261_3685	0.30	+1.2
3,796,160	-		Ga0059261_3685	0.30	-0.6
3,796,160	-		Ga0059261_3685	0.30	+0.9
3,796,160	-		Ga0059261_3685	0.30	+2.4
3,796,160	-		Ga0059261_3685	0.30	-2.5
3,796,160	-		Ga0059261_3685	0.30	-1.6
3,796,160	-		Ga0059261_3685	0.30	+0.2
3,796,160	-		Ga0059261_3685	0.30	+0.8
3,796,160	-		Ga0059261_3685	0.30	-0.9
3,796,160	-		Ga0059261_3685	0.30	+0.1
3,796,167	+		Ga0059261_3685	0.31	-1.2
3,796,458	+		Ga0059261_3685	0.69	+0.5
3,796,459	-		Ga0059261_3685	0.69	+1.3
3,796,459	-		Ga0059261_3685	0.69	-2.5
3,796,629	+				-0.4
3,796,696	+				-2.5
3,796,696	+				+1.4
3,796,696	+				+0.4
3,796,696	+				-0.9
3,796,697	-				+0.4
3,796,697	-				+1.0
3,796,697	-				-1.0
3,796,697	-				-1.2
3,796,697	-				-1.0
3,796,697	-				-2.0
3,796,697	-				-2.6
3,796,697	-				+3.8
3,796,697	-				+0.6
3,796,697	-				-0.1
3,796,697	-				-2.4
3,796,922	+		Ga0059261_3686	0.25	+0.3
3,796,922	+		Ga0059261_3686	0.25	-1.1
3,796,922	+		Ga0059261_3686	0.25	+0.2
3,796,922	+		Ga0059261_3686	0.25	+0.2
3,796,922	+		Ga0059261_3686	0.25	+0.1
3,796,922	+		Ga0059261_3686	0.25	-0.4
3,796,923	-		Ga0059261_3686	0.25	+2.2
3,796,923	-		Ga0059261_3686	0.25	+1.3
3,796,923	-		Ga0059261_3686	0.25	-0.9
3,797,300	+		Ga0059261_3686	0.68	+0.6
3,797,300	+		Ga0059261_3686	0.68	-0.8
3,797,300	+		Ga0059261_3686	0.68	-2.1
3,797,300	+		Ga0059261_3686	0.68	-1.2
3,797,300	+		Ga0059261_3686	0.68	-1.7
3,797,300	+		Ga0059261_3686	0.68	-1.6
3,797,300	+		Ga0059261_3686	0.68	+0.2
3,797,300	+		Ga0059261_3686	0.68	-1.2
3,797,300	+		Ga0059261_3686	0.68	-1.2
3,797,300	+		Ga0059261_3686	0.68	-0.6
3,797,301	-		Ga0059261_3686	0.68	-0.2
3,797,301	-		Ga0059261_3686	0.68	+2.3
3,797,301	-		Ga0059261_3686	0.68	-0.4
3,797,301	-		Ga0059261_3686	0.68	-1.6
3,797,301	-				+0.6
3,797,301	-		Ga0059261_3686	0.68	-1.9
3,797,301	-		Ga0059261_3686	0.68	+3.8
3,797,301	-		Ga0059261_3686	0.68	-1.4
3,797,306	-		Ga0059261_3686	0.68	-0.4
3,797,348	+		Ga0059261_3686	0.73	+0.3
3,797,348	+		Ga0059261_3686	0.73	+1.2
3,797,348	+		Ga0059261_3686	0.73	+1.8
3,797,348	+		Ga0059261_3686	0.73	-1.9
3,797,348	+		Ga0059261_3686	0.73	-1.0
3,797,348	+		Ga0059261_3686	0.73	+2.8
3,797,348	+		Ga0059261_3686	0.73	-2.0
3,797,348	+		Ga0059261_3686	0.73	-1.1
3,797,348	+		Ga0059261_3686	0.73	-1.7
3,797,348	+		Ga0059261_3686	0.73	+0.0
3,797,348	+		Ga0059261_3686	0.73	-0.1
3,797,349	-		Ga0059261_3686	0.73	-1.7
3,797,349	-		Ga0059261_3686	0.73	-0.5
3,797,349	-		Ga0059261_3686	0.73	-0.9
3,797,349	-		Ga0059261_3686	0.73	-1.4
3,797,502	-				+0.2
3,797,507	+				-0.9
3,797,507	+				+1.2
3,797,508	-				-1.8
3,797,508	-				-0.5
3,797,508	-				-1.1
3,797,508	-				-0.9
3,797,508	-				+2.2
3,797,509	+				+0.6
3,797,509	+				+1.2
3,797,509	+				+2.2
3,797,509	+				-1.0
3,797,509	+				+0.2
3,797,509	+				+4.1
3,797,510	-				+0.2
3,797,510	-				-0.5
3,797,586	-				+0.5
3,797,586	-				-0.2
3,797,586	-				+0.6
3,797,586	-				-1.5
3,797,586	-				-1.2
3,797,646	+				+1.0
3,797,647	-				+0.4
3,797,647	-				-1.6
3,797,647	-				+2.9
3,797,647	-				-0.5
3,797,647	-				-1.9
3,797,647	-				-0.4
3,797,647	-				+0.6
3,797,896	-		Ga0059261_3687	0.11	-0.6
3,797,908	+		Ga0059261_3687	0.12	-1.3
3,797,908	+		Ga0059261_3687	0.12	+1.1
3,797,908	+		Ga0059261_3687	0.12	+1.5
3,797,908	+		Ga0059261_3687	0.12	+1.1
3,798,016	+		Ga0059261_3687	0.18	-1.7
3,798,016	+		Ga0059261_3687	0.18	-0.5
3,798,017	-		Ga0059261_3687	0.18	+0.4
3,798,017	-		Ga0059261_3687	0.18	+0.8
3,798,017	-		Ga0059261_3687	0.18	-1.0
3,798,017	-		Ga0059261_3687	0.18	+1.1
3,798,017	-				+2.6
3,798,017	-		Ga0059261_3687	0.18	+0.7
3,798,084	+		Ga0059261_3687	0.22	-0.1
3,798,085	-		Ga0059261_3687	0.22	+1.6
3,798,085	-		Ga0059261_3687	0.22	-0.4
3,798,085	-		Ga0059261_3687	0.22	+1.2
3,798,098	+		Ga0059261_3687	0.23	+2.0
3,798,099	-		Ga0059261_3687	0.23	-0.6
3,798,099	-		Ga0059261_3687	0.23	+0.5
3,798,100	+		Ga0059261_3687	0.23	-0.1
3,798,100	+		Ga0059261_3687	0.23	+1.5
3,798,101	-		Ga0059261_3687	0.23	-0.4
3,798,101	-		Ga0059261_3687	0.23	+2.2
3,798,101	-		Ga0059261_3687	0.23	+0.5
3,798,101	-				+1.2
3,798,130	+		Ga0059261_3687	0.25	-0.3
3,798,130	+		Ga0059261_3687	0.25	+0.2
3,798,131	-		Ga0059261_3687	0.25	+0.2
3,798,131	-		Ga0059261_3687	0.25	+1.2
3,798,131	-		Ga0059261_3687	0.25	+0.8
3,798,131	-		Ga0059261_3687	0.25	+0.8
3,798,131	-		Ga0059261_3687	0.25	+2.8
3,798,131	-		Ga0059261_3687	0.25	+1.8
3,798,193	+		Ga0059261_3687	0.29	-2.7
3,798,193	+		Ga0059261_3687	0.29	-0.4
3,798,193	+		Ga0059261_3687	0.29	-0.8
3,798,193	+		Ga0059261_3687	0.29	+1.7
3,798,193	+		Ga0059261_3687	0.29	+1.9
3,798,193	+		Ga0059261_3687	0.29	-1.8
3,798,193	+		Ga0059261_3687	0.29	+0.0
3,798,193	+		Ga0059261_3687	0.29	-1.0
3,798,193	+		Ga0059261_3687	0.29	+1.3
3,798,193	+		Ga0059261_3687	0.29	+1.2
3,798,194	-		Ga0059261_3687	0.29	-1.8
3,798,194	-		Ga0059261_3687	0.29	-1.9
3,798,194	-		Ga0059261_3687	0.29	+1.5
3,798,194	-		Ga0059261_3687	0.29	-0.6
3,798,194	-				+2.2
3,798,194	-		Ga0059261_3687	0.29	-0.8
3,798,194	-		Ga0059261_3687	0.29	+1.2
3,798,194	-		Ga0059261_3687	0.29	+0.5
3,798,194	-		Ga0059261_3687	0.29	+1.5
3,798,194	-		Ga0059261_3687	0.29	-0.1
3,798,194	-		Ga0059261_3687	0.29	+0.2
3,798,194	-		Ga0059261_3687	0.29	+2.3
3,798,194	-		Ga0059261_3687	0.29	+2.8
3,798,379	+		Ga0059261_3687	0.40	-1.6
3,798,380	-		Ga0059261_3687	0.40	+1.7
3,798,425	+		Ga0059261_3687	0.43	+0.8
3,798,425	+		Ga0059261_3687	0.43	+0.6
3,798,425	+		Ga0059261_3687	0.43	+0.4
3,798,426	-		Ga0059261_3687	0.43	-1.6
3,798,426	-				-0.4
3,798,475	+		Ga0059261_3687	0.46	-0.4
3,798,475	+		Ga0059261_3687	0.46	+2.2
3,798,475	+		Ga0059261_3687	0.46	+1.8
3,798,475	+		Ga0059261_3687	0.46	-0.5
3,798,475	+		Ga0059261_3687	0.46	-2.0
3,798,475	+		Ga0059261_3687	0.46	+3.3
3,798,476	-		Ga0059261_3687	0.46	+2.4
3,798,476	-		Ga0059261_3687	0.46	-0.1
3,798,476	-		Ga0059261_3687	0.46	-2.0
3,798,476	-		Ga0059261_3687	0.46	-1.9
3,798,476	-		Ga0059261_3687	0.46	+1.2
3,798,476	-		Ga0059261_3687	0.46	+1.5
3,798,476	-		Ga0059261_3687	0.46	-0.7
3,798,476	-		Ga0059261_3687	0.46	+0.0
3,798,479	+		Ga0059261_3687	0.46	+1.0
3,798,479	+		Ga0059261_3687	0.46	+0.1
3,798,479	+		Ga0059261_3687	0.46	-1.5
3,798,479	+		Ga0059261_3687	0.46	+0.1
3,798,479	+		Ga0059261_3687	0.46	-2.4
3,798,480	-		Ga0059261_3687	0.46	-0.9
3,798,480	-		Ga0059261_3687	0.46	-0.4
3,798,480	-		Ga0059261_3687	0.46	-0.4
3,798,480	-		Ga0059261_3687	0.46	-2.1
3,798,480	-		Ga0059261_3687	0.46	+1.5
3,798,480	-		Ga0059261_3687	0.46	-1.6
3,798,480	-		Ga0059261_3687	0.46	+2.5
3,798,480	-		Ga0059261_3687	0.46	+0.1
3,798,480	-		Ga0059261_3687	0.46	-0.2
3,798,490	+		Ga0059261_3687	0.47	+0.0
3,798,490	+		Ga0059261_3687	0.47	-0.7
3,798,490	+		Ga0059261_3687	0.47	+0.9
3,798,490	+		Ga0059261_3687	0.47	-0.2
3,798,490	+		Ga0059261_3687	0.47	+0.2
3,798,490	+		Ga0059261_3687	0.47	-1.6
3,798,491	-		Ga0059261_3687	0.47	+0.2
3,798,491	-		Ga0059261_3687	0.47	-1.2
3,798,491	-		Ga0059261_3687	0.47	-0.4
3,798,491	-		Ga0059261_3687	0.47	+0.2
3,798,491	-		Ga0059261_3687	0.47	-2.3