Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2805

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,912,017	-		Ga0059261_2804	0.29	+3.1
2,912,017	-		Ga0059261_2804	0.29	-0.6
2,912,017	-		Ga0059261_2804	0.29	+0.9
2,912,035	+		Ga0059261_2804	0.31	+0.2
2,912,036	-		Ga0059261_2804	0.31	-1.5
2,912,036	-		Ga0059261_2804	0.31	+0.4
2,912,056	+		Ga0059261_2804	0.34	+1.6
2,912,056	+		Ga0059261_2804	0.34	-0.9
2,912,056	+		Ga0059261_2804	0.34	-3.2
2,912,056	+		Ga0059261_2804	0.34	+1.7
2,912,056	+		Ga0059261_2804	0.34	+1.8
2,912,056	+		Ga0059261_2804	0.34	+0.1
2,912,057	-		Ga0059261_2804	0.34	-0.5
2,912,057	-		Ga0059261_2804	0.34	-1.3
2,912,215	+		Ga0059261_2804	0.56	+0.0
2,912,215	+		Ga0059261_2804	0.56	+1.2
2,912,215	+		Ga0059261_2804	0.56	-0.2
2,912,215	+		Ga0059261_2804	0.56	+1.7
2,912,215	+		Ga0059261_2804	0.56	+0.9
2,912,215	+		Ga0059261_2804	0.56	+0.8
2,912,215	+		Ga0059261_2804	0.56	-1.4
2,912,216	-		Ga0059261_2804	0.57	-1.8
2,912,216	-		Ga0059261_2804	0.57	+0.8
2,912,216	-		Ga0059261_2804	0.57	+0.7
2,912,216	-		Ga0059261_2804	0.57	+2.7
2,912,216	-		Ga0059261_2804	0.57	+0.3
2,912,216	-		Ga0059261_2804	0.57	-0.9
2,912,216	-		Ga0059261_2804	0.57	+1.8
2,912,298	+		Ga0059261_2804	0.68	+1.2
2,912,398	+		Ga0059261_2804	0.82	+0.7
2,912,398	+		Ga0059261_2804	0.82	+1.4
2,912,398	+		Ga0059261_2804	0.82	-2.5
2,912,398	+		Ga0059261_2804	0.82	-0.3
2,912,398	+		Ga0059261_2804	0.82	-1.6
2,912,399	-		Ga0059261_2804	0.82	-2.0
2,912,399	-		Ga0059261_2804	0.82	-1.1
2,912,399	-		Ga0059261_2804	0.82	-1.0
2,912,399	-		Ga0059261_2804	0.82	+1.0
2,912,399	-		Ga0059261_2804	0.82	+1.9
2,912,553	-				-2.2
2,912,626	+				-0.1
2,912,626	+				+1.3
2,912,626	+				-2.4
2,912,626	+				+0.9
2,912,626	+				-0.7
2,912,626	+				+0.1
2,912,626	+				-0.3
2,912,626	+				+0.4
2,912,626	+				-0.3
2,912,626	+				+0.2
2,912,627	-				+1.0
2,912,627	-				+1.6
2,912,627	-				-1.1
2,912,627	-				-0.2
2,912,627	-				-1.3
2,912,627	-				-0.8
2,912,627	-				-1.5
2,912,627	-				-0.4
2,912,627	-				-0.8
2,912,627	-				+0.4
2,912,627	-				+0.4
2,912,627	-				+0.2
2,912,627	-				+0.4
2,912,627	-				-1.2
2,912,656	+				-1.3
2,912,657	-				+2.5
2,912,657	-				-2.2
2,912,676	+				+0.1
2,912,676	+				-0.7
2,912,676	+				-0.1
2,912,710	+		Ga0059261_2805	0.10	-0.3
2,912,710	+		Ga0059261_2805	0.10	+0.1
2,912,710	+		Ga0059261_2805	0.10	-1.2
2,912,710	+		Ga0059261_2805	0.10	-0.6
2,912,710	+		Ga0059261_2805	0.10	-1.7
2,912,710	+		Ga0059261_2805	0.10	-2.1
2,912,711	-		Ga0059261_2805	0.10	-2.1
2,912,711	-		Ga0059261_2805	0.10	-0.5
2,912,711	-		Ga0059261_2805	0.10	+1.0
2,912,711	-		Ga0059261_2805	0.10	-2.0
2,912,833	+		Ga0059261_2805	0.25	-0.1
2,912,842	+		Ga0059261_2805	0.26	-1.1
2,912,842	+		Ga0059261_2805	0.26	-0.4
2,912,842	+		Ga0059261_2805	0.26	-2.2
2,912,842	+		Ga0059261_2805	0.26	-0.2
2,912,842	+		Ga0059261_2805	0.26	-0.4
2,912,842	+		Ga0059261_2805	0.26	-0.2
2,912,843	-		Ga0059261_2805	0.26	-0.4
2,912,843	-		Ga0059261_2805	0.26	+0.7
2,912,843	-		Ga0059261_2805	0.26	-1.5
2,912,843	-		Ga0059261_2805	0.26	-0.5
2,912,843	-		Ga0059261_2805	0.26	+0.9
2,912,874	-				+1.4
2,912,888	-		Ga0059261_2805	0.32	-1.1
2,912,903	+				+1.4
2,912,903	+		Ga0059261_2805	0.33	+0.2
2,912,903	+		Ga0059261_2805	0.33	-1.7
2,912,903	+		Ga0059261_2805	0.33	-0.3
2,912,904	-		Ga0059261_2805	0.34	-0.4
2,912,904	-		Ga0059261_2805	0.34	-0.4
2,912,908	+		Ga0059261_2805	0.34	-0.6
2,912,908	+		Ga0059261_2805	0.34	-0.6
2,912,914	+		Ga0059261_2805	0.35	-2.8
2,912,914	+		Ga0059261_2805	0.35	-0.1
2,912,914	+		Ga0059261_2805	0.35	-1.3
2,912,915	-		Ga0059261_2805	0.35	+0.9
2,912,915	-		Ga0059261_2805	0.35	-2.0
2,912,915	-		Ga0059261_2805	0.35	-0.4
2,912,947	+		Ga0059261_2805	0.39	+1.2
2,912,947	+		Ga0059261_2805	0.39	-0.4
2,912,947	+				+2.4
2,912,977	+		Ga0059261_2805	0.42	-0.0
2,912,977	+		Ga0059261_2805	0.42	-0.3
2,912,977	+		Ga0059261_2805	0.42	-1.6
2,912,977	+		Ga0059261_2805	0.42	-2.8
2,912,978	-		Ga0059261_2805	0.42	+2.4
2,912,978	-		Ga0059261_2805	0.42	-0.2
2,912,978	-		Ga0059261_2805	0.42	-1.7
2,912,978	-		Ga0059261_2805	0.42	+1.5
2,912,978	-		Ga0059261_2805	0.42	+2.3
2,912,978	-		Ga0059261_2805	0.42	-1.6
2,913,103	+				+2.4
2,913,103	+				+2.4
2,913,160	+		Ga0059261_2805	0.64	-2.4
2,913,160	+		Ga0059261_2805	0.64	+1.0
2,913,161	-				-0.4
2,913,161	-		Ga0059261_2805	0.65	+1.8
2,913,161	-		Ga0059261_2805	0.65	-2.8
2,913,161	-		Ga0059261_2805	0.65	+0.7
2,913,191	-				+0.4
2,913,191	-		Ga0059261_2805	0.68	+1.3
2,913,337	+		Ga0059261_2805	0.86	+2.3
2,913,337	+		Ga0059261_2805	0.86	-0.6
2,913,337	+		Ga0059261_2805	0.86	-0.4
2,913,337	+		Ga0059261_2805	0.86	-0.6
2,913,338	-		Ga0059261_2805	0.86	-0.3
2,913,347	+		Ga0059261_2805	0.87	-2.6
2,913,348	-		Ga0059261_2805	0.87	+0.8
2,913,348	-		Ga0059261_2805	0.87	+2.4
2,913,348	-		Ga0059261_2805	0.87	+1.4
2,913,348	-		Ga0059261_2805	0.87	-0.9
2,913,348	-		Ga0059261_2805	0.87	-2.3
2,913,349	+				+4.0
2,913,350	-		Ga0059261_2805	0.87	-1.8
2,913,350	-		Ga0059261_2805	0.87	+1.6
2,913,350	-		Ga0059261_2805	0.87	-2.3
2,913,350	-		Ga0059261_2805	0.87	-0.4
2,913,447	+				-0.1
2,913,447	+				-0.4
2,913,447	+				+0.2
2,913,447	+				+0.3
2,913,448	-				+1.7
2,913,448	-				+1.1
2,913,448	-				+0.1
2,913,448	-				-1.1
2,913,448	-				-1.8
2,913,448	-				-1.1
2,913,448	-				+1.6
2,913,448	-				+2.1
2,913,481	+				+0.4
2,913,481	+				+1.5
2,913,482	-				+0.7
2,913,482	-				+0.8
2,913,509	+				-0.0
2,913,510	-				+2.6
2,913,510	-				-0.6
2,913,510	-				-0.6
2,913,542	+				-0.4
2,913,542	+				-0.3
2,913,543	-				+1.4
2,913,543	-				-1.2
2,913,543	-				-1.6
2,913,549	+				-0.4
2,913,549	+				+0.8
2,913,549	+				-2.3
2,913,549	+				-1.2
2,913,550	-				-1.2
2,913,550	-				-0.2
2,913,550	-				-1.7
2,913,550	-				+0.1
2,913,566	-				-0.5
2,913,689	+				+4.8
2,913,690	-				+0.5
2,913,848	+		Ga0059261_2806	0.22	-3.1
2,913,849	-		Ga0059261_2806	0.22	+3.0
2,913,849	-		Ga0059261_2806	0.22	+0.4
2,913,857	-		Ga0059261_2806	0.23	+1.7
2,913,867	+		Ga0059261_2806	0.24	+1.9
2,913,867	+		Ga0059261_2806	0.24	+0.1
2,913,868	-		Ga0059261_2806	0.25	-2.3
2,913,876	+		Ga0059261_2806	0.25	-0.9
2,913,876	+		Ga0059261_2806	0.25	+0.0
2,913,876	+		Ga0059261_2806	0.25	-1.9
2,913,876	+		Ga0059261_2806	0.25	+2.7
2,913,876	+		Ga0059261_2806	0.25	+0.1
2,913,876	+		Ga0059261_2806	0.25	+2.4
2,913,876	+		Ga0059261_2806	0.25	-1.0
2,913,877	-		Ga0059261_2806	0.26	+2.4
2,913,877	-		Ga0059261_2806	0.26	-1.5
2,913,877	-		Ga0059261_2806	0.26	-1.8
2,913,877	-		Ga0059261_2806	0.26	-1.5
2,913,877	-		Ga0059261_2806	0.26	-0.7
2,913,877	-		Ga0059261_2806	0.26	+0.1
2,913,877	-		Ga0059261_2806	0.26	+0.1
2,913,877	-		Ga0059261_2806	0.26	+1.8
2,913,897	+		Ga0059261_2806	0.28	-2.9
2,913,897	+		Ga0059261_2806	0.28	-3.0
2,913,897	+		Ga0059261_2806	0.28	+1.2
2,913,897	+		Ga0059261_2806	0.28	+0.9
2,913,897	+		Ga0059261_2806	0.28	+1.4
2,913,897	+		Ga0059261_2806	0.28	-0.4
2,913,897	+		Ga0059261_2806	0.28	-1.5
2,913,897	+		Ga0059261_2806	0.28	-2.2
2,913,898	-		Ga0059261_2806	0.28	-3.0
2,913,898	-		Ga0059261_2806	0.28	-1.8
2,913,898	-		Ga0059261_2806	0.28	+2.3
2,913,898	-		Ga0059261_2806	0.28	+0.4
2,913,898	-		Ga0059261_2806	0.28	-0.3
2,913,898	-		Ga0059261_2806	0.28	+0.2
2,913,898	-		Ga0059261_2806	0.28	-0.4
2,913,898	-		Ga0059261_2806	0.28	+1.1
2,913,898	-		Ga0059261_2806	0.28	-0.6
2,913,898	-		Ga0059261_2806	0.28	+0.4
2,913,898	-		Ga0059261_2806	0.28	+1.2
2,913,898	-		Ga0059261_2806	0.28	+2.0
2,914,041	-		Ga0059261_2806	0.44	-2.1
2,914,047	+		Ga0059261_2806	0.45	-0.4
2,914,047	+		Ga0059261_2806	0.45	+1.2
2,914,047	+		Ga0059261_2806	0.45	+0.2
2,914,047	+		Ga0059261_2806	0.45	-2.1
2,914,047	+		Ga0059261_2806	0.45	+0.1
2,914,047	+		Ga0059261_2806	0.45	+0.5
2,914,047	+		Ga0059261_2806	0.45	+0.2
2,914,047	+		Ga0059261_2806	0.45	-1.8
2,914,047	+		Ga0059261_2806	0.45	-0.2
2,914,047	+		Ga0059261_2806	0.45	-1.2
2,914,047	+		Ga0059261_2806	0.45	+2.7
2,914,047	+		Ga0059261_2806	0.45	+3.7
2,914,047	+		Ga0059261_2806	0.45	+3.6
2,914,047	+		Ga0059261_2806	0.45	-0.3
2,914,047	+		Ga0059261_2806	0.45	+0.0
2,914,048	-		Ga0059261_2806	0.45	-0.5
2,914,048	-				+0.4
2,914,048	-		Ga0059261_2806	0.45	+0.1
2,914,048	-				+0.4
2,914,048	-		Ga0059261_2806	0.45	-0.9
2,914,048	-		Ga0059261_2806	0.45	-0.4
2,914,048	-		Ga0059261_2806	0.45	-0.5
2,914,048	-		Ga0059261_2806	0.45	-0.5
2,914,048	-		Ga0059261_2806	0.45	-1.6
2,914,048	-		Ga0059261_2806	0.45	-2.6
2,914,049	+				+3.4
2,914,049	+		Ga0059261_2806	0.45	-0.8
2,914,049	+		Ga0059261_2806	0.45	+0.4
2,914,049	+		Ga0059261_2806	0.45	+0.2
2,914,049	+		Ga0059261_2806	0.45	+0.1
2,914,049	+		Ga0059261_2806	0.45	+0.9
2,914,050	-		Ga0059261_2806	0.45	-2.2
2,914,050	-		Ga0059261_2806	0.45	-0.1
2,914,050	-				+1.4
2,914,050	-		Ga0059261_2806	0.45	+0.1
2,914,052	-		Ga0059261_2806	0.46	+1.4
2,914,134	+		Ga0059261_2806	0.55	+0.9
2,914,134	+		Ga0059261_2806	0.55	-1.5
2,914,135	-		Ga0059261_2806	0.55	+2.6
2,914,272	+		Ga0059261_2806	0.71	+0.8
2,914,272	+		Ga0059261_2806	0.71	-1.1
2,914,272	+		Ga0059261_2806	0.71	+2.1
2,914,272	+		Ga0059261_2806	0.71	+1.3
2,914,272	+		Ga0059261_2806	0.71	+0.8
2,914,273	-		Ga0059261_2806	0.71	-1.0
2,914,273	-		Ga0059261_2806	0.71	+0.6