Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2602

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
2,688,879	-				+1.6
2,688,890	-				-0.2
2,688,981	+				-0.1
2,688,981	+				-1.0
2,689,042	+				-1.6
2,689,042	+				-1.3
2,689,042	+				-2.0
2,689,042	+				+1.5
2,689,043	-				+0.2
2,689,043	-				-2.3
2,689,043	-				-2.8
2,689,045	+				-2.4
2,689,045	+				-2.2
2,689,045	+				+3.8
2,689,045	+				-1.6
2,689,045	+				-1.5
2,689,045	+				-0.8
2,689,046	-				+0.7
2,689,046	-				-0.2
2,689,046	-				+0.7
2,689,115	-				-0.5
2,689,213	-		Ga0059261_2602	0.11	+2.7
2,689,213	-		Ga0059261_2602	0.11	-0.4
2,689,326	+		Ga0059261_2602	0.27	+0.3
2,689,326	+		Ga0059261_2602	0.27	-2.6
2,689,326	+		Ga0059261_2602	0.27	+0.4
2,689,326	+		Ga0059261_2602	0.27	+1.6
2,689,326	+		Ga0059261_2602	0.27	+0.8
2,689,326	+		Ga0059261_2602	0.27	-1.1
2,689,326	+		Ga0059261_2602	0.27	-1.2
2,689,326	+				+2.4
2,689,326	+		Ga0059261_2602	0.27	+0.4
2,689,326	+		Ga0059261_2602	0.27	-1.8
2,689,326	+		Ga0059261_2602	0.27	+0.3
2,689,326	+		Ga0059261_2602	0.27	+0.2
2,689,327	-		Ga0059261_2602	0.27	-1.2
2,689,327	-		Ga0059261_2602	0.27	-0.2
2,689,327	-		Ga0059261_2602	0.27	+1.4
2,689,327	-		Ga0059261_2602	0.27	-1.1
2,689,327	-		Ga0059261_2602	0.27	-0.6
2,689,327	-		Ga0059261_2602	0.27	-1.0
2,689,327	-		Ga0059261_2602	0.27	+0.7
2,689,327	-		Ga0059261_2602	0.27	+0.1
2,689,327	-		Ga0059261_2602	0.27	-0.4
2,689,327	-		Ga0059261_2602	0.27	+0.6
2,689,327	-		Ga0059261_2602	0.27	+0.8
2,689,327	-		Ga0059261_2602	0.27	-1.0
2,689,331	+		Ga0059261_2602	0.28	-0.5
2,689,331	+		Ga0059261_2602	0.28	+0.9
2,689,331	+		Ga0059261_2602	0.28	-3.0
2,689,331	+		Ga0059261_2602	0.28	+1.1
2,689,331	+		Ga0059261_2602	0.28	-0.0
2,689,331	+		Ga0059261_2602	0.28	-0.0
2,689,331	+		Ga0059261_2602	0.28	-0.6
2,689,332	-		Ga0059261_2602	0.28	+1.1
2,689,332	-		Ga0059261_2602	0.28	-0.3
2,689,332	-		Ga0059261_2602	0.28	+1.1
2,689,332	-		Ga0059261_2602	0.28	-0.5
2,689,332	-		Ga0059261_2602	0.28	-0.7
2,689,332	-		Ga0059261_2602	0.28	-1.0
2,689,332	-		Ga0059261_2602	0.28	+0.8
2,689,332	-		Ga0059261_2602	0.28	-1.2
2,689,332	-		Ga0059261_2602	0.28	-1.0
2,689,376	+		Ga0059261_2602	0.34	-1.8
2,689,377	-		Ga0059261_2602	0.34	+1.6
2,689,424	+		Ga0059261_2602	0.41	-1.4
2,689,424	+		Ga0059261_2602	0.41	-2.0
2,689,424	+		Ga0059261_2602	0.41	+1.4
2,689,425	-		Ga0059261_2602	0.41	-0.4
2,689,425	-		Ga0059261_2602	0.41	+3.4
2,689,425	-		Ga0059261_2602	0.41	-0.2
2,689,425	-		Ga0059261_2602	0.41	+0.1
2,689,471	+		Ga0059261_2602	0.48	+0.5
2,689,471	+		Ga0059261_2602	0.48	-2.0
2,689,471	+		Ga0059261_2602	0.48	-0.2
2,689,471	+		Ga0059261_2602	0.48	-0.8
2,689,471	+		Ga0059261_2602	0.48	+2.0
2,689,471	+		Ga0059261_2602	0.48	-0.2
2,689,471	+		Ga0059261_2602	0.48	+2.1
2,689,471	+		Ga0059261_2602	0.48	-0.6
2,689,472	-		Ga0059261_2602	0.48	+0.4
2,689,472	-		Ga0059261_2602	0.48	-1.7
2,689,472	-		Ga0059261_2602	0.48	+1.0
2,689,472	-		Ga0059261_2602	0.48	+2.1
2,689,472	-		Ga0059261_2602	0.48	-2.0
2,689,472	-		Ga0059261_2602	0.48	+1.4
2,689,478	+		Ga0059261_2602	0.49	-0.1
2,689,478	+		Ga0059261_2602	0.49	+2.4
2,689,478	+		Ga0059261_2602	0.49	+0.4
2,689,478	+		Ga0059261_2602	0.49	-1.4
2,689,478	+		Ga0059261_2602	0.49	-1.6
2,689,478	+		Ga0059261_2602	0.49	+1.5
2,689,478	+				+2.9
2,689,479	-		Ga0059261_2602	0.49	+3.0
2,689,479	-		Ga0059261_2602	0.49	-0.4
2,689,479	-		Ga0059261_2602	0.49	+0.9
2,689,479	-		Ga0059261_2602	0.49	+0.5
2,689,528	+		Ga0059261_2602	0.56	-2.1
2,689,528	+		Ga0059261_2602	0.56	+0.5
2,689,668	+		Ga0059261_2602	0.75	+0.0
2,689,668	+		Ga0059261_2602	0.75	+1.3
2,689,669	-		Ga0059261_2602	0.76	+0.8
2,689,669	-		Ga0059261_2602	0.76	+2.2
2,689,861	+				-1.9
2,689,862	-				+0.0
2,689,912	+		Ga0059261_2603	0.11	-1.5
2,689,912	+		Ga0059261_2603	0.11	-0.8
2,689,912	+		Ga0059261_2603	0.11	-2.1
2,689,913	-		Ga0059261_2603	0.11	-2.5
2,689,913	-		Ga0059261_2603	0.11	+0.9
2,689,918	+		Ga0059261_2603	0.12	-0.4
2,689,918	+		Ga0059261_2603	0.12	-2.5
2,689,918	+		Ga0059261_2603	0.12	+1.8
2,689,919	-		Ga0059261_2603	0.12	-0.0
2,689,919	-		Ga0059261_2603	0.12	+1.2
2,689,919	-		Ga0059261_2603	0.12	-2.3
2,689,967	+		Ga0059261_2603	0.19	-0.1
2,690,109	+		Ga0059261_2603	0.38	+1.6
2,690,109	+		Ga0059261_2603	0.38	+1.3
2,690,109	+		Ga0059261_2603	0.38	+0.8
2,690,110	-		Ga0059261_2603	0.38	-1.7
2,690,110	-		Ga0059261_2603	0.38	-0.5
2,690,110	-		Ga0059261_2603	0.38	-0.6
2,690,110	-		Ga0059261_2603	0.38	+0.2
2,690,131	+		Ga0059261_2603	0.41	-1.3
2,690,131	+		Ga0059261_2603	0.41	+1.3
2,690,131	+		Ga0059261_2603	0.41	-0.2
2,690,132	-		Ga0059261_2603	0.42	+0.8
2,690,132	-		Ga0059261_2603	0.42	-0.7
2,690,132	-		Ga0059261_2603	0.42	-0.9
2,690,132	-				+0.0
2,690,180	+		Ga0059261_2603	0.48	+0.4
2,690,181	-		Ga0059261_2603	0.48	+0.1
2,690,181	-		Ga0059261_2603	0.48	+0.2
2,690,181	-		Ga0059261_2603	0.48	-0.6
2,690,224	+		Ga0059261_2603	0.54	+0.5
2,690,224	+		Ga0059261_2603	0.54	+3.4
2,690,224	+		Ga0059261_2603	0.54	+0.9
2,690,225	-		Ga0059261_2603	0.54	-0.8
2,690,225	-		Ga0059261_2603	0.54	-1.6
2,690,356	+				-0.2
2,690,356	+		Ga0059261_2603	0.73	+0.5
2,690,356	+		Ga0059261_2603	0.73	-0.0
2,690,357	-		Ga0059261_2603	0.73	-0.4
2,690,357	-		Ga0059261_2603	0.73	+0.2
2,690,384	+		Ga0059261_2603	0.77	-0.3
2,690,384	+		Ga0059261_2603	0.77	-0.1
2,690,384	+		Ga0059261_2603	0.77	+1.0
2,690,385	-		Ga0059261_2603	0.77	+0.3
2,690,385	-		Ga0059261_2603	0.77	+2.5
2,690,385	-		Ga0059261_2603	0.77	-1.1
2,690,385	-		Ga0059261_2603	0.77	-2.5
2,690,451	-		Ga0059261_2603	0.86	+0.3
2,690,604	+				-0.0
2,690,604	+				+1.9
2,690,604	+				-1.0
2,690,604	+				-0.3
2,690,604	+				+2.0
2,690,605	-				+1.7
2,690,605	-				-0.9
2,690,605	-				-0.5
2,690,605	-				-2.0
2,690,605	-				-1.3
2,690,609	+				-0.3
2,690,609	+				-0.9
2,690,610	-				-0.1
2,690,642	+				-2.7
2,690,643	-				+0.5
2,690,643	-				-0.1
2,690,643	-				+0.8
2,690,643	-				-0.5
2,690,643	-				-2.6
2,690,643	-				+0.4
2,690,676	+				+1.8
2,690,676	+				+0.4
2,690,676	+				+0.3
2,690,677	-				-0.1
2,690,677	-				-1.6
2,690,747	+				-1.2
2,690,748	-				+0.4
2,690,754	+				+0.0
2,690,754	+				-1.2
2,690,754	+				+1.6
2,690,754	+				-0.5
2,690,755	-				-1.8
2,690,755	-				+0.3
2,690,799	+		Ga0059261_2604	0.10	-1.6
2,690,799	+		Ga0059261_2604	0.10	-0.8
2,690,799	+		Ga0059261_2604	0.10	-0.5
2,690,799	+		Ga0059261_2604	0.10	-1.1
2,690,800	-		Ga0059261_2604	0.10	-0.8
2,690,800	-		Ga0059261_2604	0.10	+0.3
2,690,800	-		Ga0059261_2604	0.10	+1.9
2,690,836	+				+1.4
2,690,836	+		Ga0059261_2604	0.13	-0.5
2,690,837	-		Ga0059261_2604	0.13	+0.4
2,690,837	-		Ga0059261_2604	0.13	-0.1