Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1662

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,757,921	+		Ga0059261_1661	0.15	-1.2
1,757,921	+		Ga0059261_1661	0.15	-0.1
1,757,921	+		Ga0059261_1661	0.15	+0.6
1,757,921	+		Ga0059261_1661	0.15	-1.6
1,757,921	+		Ga0059261_1661	0.15	+0.4
1,757,922	-		Ga0059261_1661	0.15	-3.3
1,757,922	-		Ga0059261_1661	0.15	+0.7
1,757,922	-		Ga0059261_1661	0.15	-1.7
1,757,922	-		Ga0059261_1661	0.15	+0.3
1,757,922	-		Ga0059261_1661	0.15	-0.0
1,757,922	-		Ga0059261_1661	0.15	+0.7
1,757,922	-		Ga0059261_1661	0.15	+1.9
1,757,925	-		Ga0059261_1661	0.15	-0.5
1,757,925	-		Ga0059261_1661	0.15	+1.5
1,757,925	-		Ga0059261_1661	0.15	-0.7
1,757,936	-		Ga0059261_1661	0.16	-1.0
1,758,195	-		Ga0059261_1661	0.42	-0.4
1,758,195	-		Ga0059261_1661	0.42	+0.4
1,758,315	+		Ga0059261_1661	0.54	+2.5
1,758,315	+		Ga0059261_1661	0.54	+0.7
1,758,316	-		Ga0059261_1661	0.54	-2.0
1,758,316	-		Ga0059261_1661	0.54	+0.5
1,758,494	+		Ga0059261_1661	0.72	-1.1
1,758,495	-		Ga0059261_1661	0.72	+0.5
1,758,508	+		Ga0059261_1661	0.73	-0.8
1,758,508	+		Ga0059261_1661	0.73	-2.3
1,758,508	+		Ga0059261_1661	0.73	+0.3
1,758,508	+				+0.4
1,758,508	+		Ga0059261_1661	0.73	-0.1
1,758,508	+		Ga0059261_1661	0.73	+0.8
1,758,508	+		Ga0059261_1661	0.73	+0.1
1,758,508	+		Ga0059261_1661	0.73	-2.4
1,758,508	+		Ga0059261_1661	0.73	-0.4
1,758,509	-		Ga0059261_1661	0.73	-1.3
1,758,579	+		Ga0059261_1661	0.80	-2.4
1,758,579	+		Ga0059261_1661	0.80	+0.4
1,758,580	-		Ga0059261_1661	0.80	+0.9
1,758,580	-		Ga0059261_1661	0.80	+0.6
1,758,580	-		Ga0059261_1661	0.80	-0.0
1,758,632	+		Ga0059261_1661	0.85	+3.6
1,758,632	+		Ga0059261_1661	0.85	-1.6
1,758,632	+		Ga0059261_1661	0.85	+0.2
1,758,632	+		Ga0059261_1661	0.85	+1.1
1,758,632	+		Ga0059261_1661	0.85	+1.1
1,758,633	-		Ga0059261_1661	0.85	-0.6
1,758,633	-		Ga0059261_1661	0.85	-0.4
1,758,633	-		Ga0059261_1661	0.85	+2.0
1,758,633	-		Ga0059261_1661	0.85	+0.4
1,758,633	-		Ga0059261_1661	0.85	-1.1
1,758,633	-		Ga0059261_1661	0.85	+1.2
1,758,633	-		Ga0059261_1661	0.85	+1.9
1,758,633	-		Ga0059261_1661	0.85	-0.5
1,758,713	+				+0.8
1,758,713	+				+3.6
1,758,713	+				-0.3
1,758,713	+				+0.3
1,758,714	-				-0.4
1,758,714	-				-1.7
1,758,714	-				-0.8
1,758,795	+				+2.4
1,758,796	-				-1.1
1,758,831	+				+2.4
1,758,902	+		Ga0059261_1662	0.14	-0.7
1,759,239	+		Ga0059261_1662	0.47	-1.5
1,759,239	+		Ga0059261_1662	0.47	-2.0
1,759,239	+		Ga0059261_1662	0.47	-0.0
1,759,239	+		Ga0059261_1662	0.47	-1.7
1,759,239	+		Ga0059261_1662	0.47	-0.8
1,759,239	+		Ga0059261_1662	0.47	-0.1
1,759,240	-		Ga0059261_1662	0.47	+0.7
1,759,240	-		Ga0059261_1662	0.47	+2.4
1,759,240	-		Ga0059261_1662	0.47	+0.3
1,759,458	+		Ga0059261_1662	0.68	-2.7
1,759,458	+		Ga0059261_1662	0.68	-1.0
1,759,458	+		Ga0059261_1662	0.68	-1.5
1,759,458	+		Ga0059261_1662	0.68	-1.0
1,759,459	-		Ga0059261_1662	0.68	-1.9
1,759,459	-		Ga0059261_1662	0.68	-0.8
1,759,459	-		Ga0059261_1662	0.68	+1.6
1,759,459	-		Ga0059261_1662	0.68	+1.1
1,759,459	-		Ga0059261_1662	0.68	+1.4
1,759,459	-		Ga0059261_1662	0.68	+0.7
1,759,459	-		Ga0059261_1662	0.68	+3.9
1,759,459	-		Ga0059261_1662	0.68	-0.7
1,759,520	+		Ga0059261_1662	0.74	+1.6
1,759,520	+		Ga0059261_1662	0.74	-0.6
1,759,520	+		Ga0059261_1662	0.74	+1.6
1,759,520	+		Ga0059261_1662	0.74	-1.0
1,759,521	-		Ga0059261_1662	0.74	-1.8
1,759,521	-		Ga0059261_1662	0.74	-0.4
1,759,521	-		Ga0059261_1662	0.74	-1.2
1,759,521	-		Ga0059261_1662	0.74	-0.2
1,759,521	-		Ga0059261_1662	0.74	-0.3
1,759,532	+		Ga0059261_1662	0.75	+0.1
1,759,532	+		Ga0059261_1662	0.75	+0.1
1,759,532	+		Ga0059261_1662	0.75	-1.3
1,759,533	-		Ga0059261_1662	0.75	+0.0
1,759,594	-		Ga0059261_1662	0.81	+0.8
1,759,652	+		Ga0059261_1662	0.87	-0.3
1,759,652	+		Ga0059261_1662	0.87	-0.5
1,759,710	+				-2.2
1,759,844	+				-0.4
1,759,844	+				-1.4
1,759,844	+				-1.3
1,759,844	+				+0.4
1,759,844	+				+1.8
1,759,844	+				+1.9
1,759,844	+				-0.3
1,759,844	+				-1.0
1,759,844	+				+0.0
1,759,845	-				-0.6
1,759,845	-				-1.0
1,759,845	-				-1.0
1,759,845	-				+1.1
1,759,845	-				-1.0
1,759,845	-				+0.9
1,759,845	-				-2.0
1,759,845	-				-2.1
1,759,845	-				-0.1
1,759,935	+				-1.3
1,759,935	+				+1.7
1,759,935	+				-0.6
1,759,935	+				+0.7
1,759,935	+				-0.2
1,759,936	-				+1.8
1,759,936	-				-0.4
1,759,936	-				+0.6
1,759,936	-				-2.9
1,759,936	-				+0.4
1,759,940	+				-0.4
1,759,940	+				+0.6
1,759,940	+				-0.1
1,759,940	+				-2.7
1,759,940	+				-0.3
1,759,941	-				-0.4
1,759,965	+				-0.6
1,759,965	+				+2.7
1,759,965	+				-0.5
1,759,965	+				+0.8
1,759,965	+				-0.6
1,759,965	+				+0.8
1,759,965	+				-1.1
1,759,965	+				-0.6
1,759,965	+				+1.2
1,759,965	+				-0.1
1,759,965	+				+0.1
1,759,965	+				+0.6
1,759,965	+				-1.4
1,759,965	+				+0.4
1,759,966	-				-0.6
1,759,966	-				-2.5
1,759,966	-				+4.2
1,759,966	-				+1.1
1,759,966	-				-0.5
1,759,966	-				+0.7
1,759,966	-				-1.0
1,760,028	+		Ga0059261_1663	0.12	-2.0
1,760,028	+		Ga0059261_1663	0.12	+0.5
1,760,028	+		Ga0059261_1663	0.12	-2.3
1,760,028	+		Ga0059261_1663	0.12	-2.2
1,760,028	+		Ga0059261_1663	0.12	-1.8
1,760,029	-		Ga0059261_1663	0.12	-0.6
1,760,029	-		Ga0059261_1663	0.12	-2.3
1,760,029	-		Ga0059261_1663	0.12	+0.9
1,760,029	-				+2.4
1,760,029	-		Ga0059261_1663	0.12	-2.0
1,760,029	-		Ga0059261_1663	0.12	-0.3
1,760,268	+		Ga0059261_1663	0.26	+0.4
1,760,268	+				+2.4
1,760,268	+		Ga0059261_1663	0.26	-0.6
1,760,268	+		Ga0059261_1663	0.26	+1.4
1,760,269	-		Ga0059261_1663	0.26	+0.3
1,760,269	-		Ga0059261_1663	0.26	-0.6
1,760,269	-		Ga0059261_1663	0.26	+2.0
1,760,269	-		Ga0059261_1663	0.26	-0.5
1,760,269	-		Ga0059261_1663	0.26	+0.5
1,760,269	-		Ga0059261_1663	0.26	-0.3
1,760,269	-		Ga0059261_1663	0.26	-2.1
1,760,269	-		Ga0059261_1663	0.26	-1.3
1,760,269	-				+2.4
1,760,269	-		Ga0059261_1663	0.26	+1.7
1,760,269	-		Ga0059261_1663	0.26	+1.0
1,760,298	+		Ga0059261_1663	0.27	-0.2
1,760,299	-		Ga0059261_1663	0.27	-1.6
1,760,299	-		Ga0059261_1663	0.27	-0.1
1,760,299	-		Ga0059261_1663	0.27	-2.4
1,760,299	-		Ga0059261_1663	0.27	-2.0
1,760,346	+		Ga0059261_1663	0.30	-1.0
1,760,346	+		Ga0059261_1663	0.30	-0.4
1,760,346	+		Ga0059261_1663	0.30	+1.1
1,760,346	+		Ga0059261_1663	0.30	-1.0
1,760,346	+		Ga0059261_1663	0.30	-0.9
1,760,346	+		Ga0059261_1663	0.30	+0.9
1,760,346	+		Ga0059261_1663	0.30	+1.8
1,760,346	+		Ga0059261_1663	0.30	-2.0
1,760,346	+		Ga0059261_1663	0.30	-0.8
1,760,346	+		Ga0059261_1663	0.30	-0.8
1,760,346	+		Ga0059261_1663	0.30	-1.0
1,760,347	-		Ga0059261_1663	0.30	+1.6
1,760,347	-		Ga0059261_1663	0.30	-1.4
1,760,347	-		Ga0059261_1663	0.30	-1.3
1,760,347	-		Ga0059261_1663	0.30	+0.2
1,760,347	-		Ga0059261_1663	0.30	-0.8
1,760,347	-		Ga0059261_1663	0.30	+0.0
1,760,347	-		Ga0059261_1663	0.30	+0.8
1,760,347	-		Ga0059261_1663	0.30	-1.5
1,760,347	-		Ga0059261_1663	0.30	-0.8
1,760,487	+		Ga0059261_1663	0.38	-2.1
1,760,487	+		Ga0059261_1663	0.38	-1.1
1,760,487	+		Ga0059261_1663	0.38	+0.5
1,760,488	-		Ga0059261_1663	0.38	+0.4
1,760,488	-		Ga0059261_1663	0.38	+1.5
1,760,488	-		Ga0059261_1663	0.38	+0.8
1,760,488	-		Ga0059261_1663	0.38	+0.4
1,760,488	-		Ga0059261_1663	0.38	+1.6
1,760,502	+		Ga0059261_1663	0.39	-0.1
1,760,502	+		Ga0059261_1663	0.39	+2.0
1,760,502	+		Ga0059261_1663	0.39	+0.7
1,760,502	+		Ga0059261_1663	0.39	-0.5
1,760,503	-		Ga0059261_1663	0.39	-0.4
1,760,503	-		Ga0059261_1663	0.39	-0.2
1,760,503	-		Ga0059261_1663	0.39	-2.2
1,760,503	-		Ga0059261_1663	0.39	+3.7
1,760,562	+		Ga0059261_1663	0.42	-2.5
1,760,562	+		Ga0059261_1663	0.42	-1.5
1,760,562	+		Ga0059261_1663	0.42	-0.9
1,760,563	-		Ga0059261_1663	0.42	-0.2
1,760,564	+		Ga0059261_1663	0.42	+1.7
1,760,564	+		Ga0059261_1663	0.42	-1.0
1,760,564	+		Ga0059261_1663	0.42	+1.1
1,760,564	+		Ga0059261_1663	0.42	+0.6
1,760,564	+		Ga0059261_1663	0.42	-0.5
1,760,565	-		Ga0059261_1663	0.42	-0.7
1,760,565	-		Ga0059261_1663	0.42	+2.8
1,760,565	-		Ga0059261_1663	0.42	+0.6
1,760,573	+		Ga0059261_1663	0.43	-1.5
1,760,573	+		Ga0059261_1663	0.43	+0.5
1,760,573	+		Ga0059261_1663	0.43	+1.1
1,760,573	+		Ga0059261_1663	0.43	+1.8
1,760,574	-		Ga0059261_1663	0.43	-0.3
1,760,574	-		Ga0059261_1663	0.43	-3.0
1,760,574	-		Ga0059261_1663	0.43	+1.2
1,760,658	+		Ga0059261_1663	0.48	-0.6
1,760,658	+		Ga0059261_1663	0.48	-0.0
1,760,658	+		Ga0059261_1663	0.48	-1.1
1,760,763	+		Ga0059261_1663	0.54	+1.0
1,760,763	+		Ga0059261_1663	0.54	-2.6
1,760,763	+		Ga0059261_1663	0.54	+0.6
1,760,763	+		Ga0059261_1663	0.54	-0.2
1,760,763	+		Ga0059261_1663	0.54	-2.2
1,760,763	+		Ga0059261_1663	0.54	+1.1
1,760,763	+		Ga0059261_1663	0.54	+0.1
1,760,763	+		Ga0059261_1663	0.54	+0.1
1,760,763	+		Ga0059261_1663	0.54	-1.4
1,760,763	+		Ga0059261_1663	0.54	-1.0
1,760,763	+		Ga0059261_1663	0.54	+0.0
1,760,763	+		Ga0059261_1663	0.54	+0.4
1,760,763	+				+1.4
1,760,763	+		Ga0059261_1663	0.54	-0.8
1,760,763	+		Ga0059261_1663	0.54	-1.8
1,760,763	+		Ga0059261_1663	0.54	+0.2
1,760,763	+		Ga0059261_1663	0.54	-1.4
1,760,763	+		Ga0059261_1663	0.54	-0.1
1,760,763	+		Ga0059261_1663	0.54	+0.2
1,760,763	+		Ga0059261_1663	0.54	+1.2
1,760,763	+		Ga0059261_1663	0.54	-0.1
1,760,763	+		Ga0059261_1663	0.54	-0.4
1,760,763	+		Ga0059261_1663	0.54	-0.4
1,760,764	-		Ga0059261_1663	0.54	+1.0
1,760,764	-		Ga0059261_1663	0.54	+1.3
1,760,764	-		Ga0059261_1663	0.54	-1.7
1,760,764	-		Ga0059261_1663	0.54	+0.3
1,760,764	-		Ga0059261_1663	0.54	+1.8
1,760,764	-		Ga0059261_1663	0.54	-1.8
1,760,764	-		Ga0059261_1663	0.54	-1.0
1,760,764	-		Ga0059261_1663	0.54	-0.8
1,760,764	-		Ga0059261_1663	0.54	+0.7
1,760,764	-		Ga0059261_1663	0.54	+2.6
1,760,769	+		Ga0059261_1663	0.54	-0.1
1,760,769	+		Ga0059261_1663	0.54	+1.8
1,760,770	-		Ga0059261_1663	0.54	-0.9
1,760,770	-		Ga0059261_1663	0.54	+0.4