Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1296

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,360,212	+		Ga0059261_1295	0.70	-1.0
1,360,213	-		Ga0059261_1295	0.70	-1.1
1,360,213	-		Ga0059261_1295	0.70	-0.0
1,360,213	-		Ga0059261_1295	0.70	-2.4
1,360,257	+		Ga0059261_1295	0.72	-0.5
1,360,257	+				+2.3
1,360,257	+		Ga0059261_1295	0.72	-1.3
1,360,257	+		Ga0059261_1295	0.72	+1.2
1,360,257	+		Ga0059261_1295	0.72	-0.0
1,360,257	+		Ga0059261_1295	0.72	-0.0
1,360,257	+		Ga0059261_1295	0.72	-0.6
1,360,258	-		Ga0059261_1295	0.72	+0.3
1,360,258	-		Ga0059261_1295	0.72	+0.6
1,360,258	-		Ga0059261_1295	0.72	-2.4
1,360,258	-		Ga0059261_1295	0.72	-1.8
1,360,258	-		Ga0059261_1295	0.72	+0.0
1,360,258	-		Ga0059261_1295	0.72	-0.6
1,360,258	-		Ga0059261_1295	0.72	+1.3
1,360,258	-		Ga0059261_1295	0.72	-0.1
1,360,452	+		Ga0059261_1295	0.79	+4.9
1,360,452	+		Ga0059261_1295	0.79	-0.9
1,360,452	+		Ga0059261_1295	0.79	+0.7
1,360,453	-		Ga0059261_1295	0.79	+0.8
1,360,453	-				+0.7
1,360,453	-		Ga0059261_1295	0.79	-0.5
1,360,453	-		Ga0059261_1295	0.79	+1.7
1,360,461	+		Ga0059261_1295	0.79	+0.6
1,360,461	+		Ga0059261_1295	0.79	+0.1
1,360,462	-		Ga0059261_1295	0.79	-1.0
1,360,462	-		Ga0059261_1295	0.79	+1.7
1,360,557	+		Ga0059261_1295	0.83	-1.0
1,360,557	+		Ga0059261_1295	0.83	+1.0
1,360,557	+		Ga0059261_1295	0.83	+0.2
1,360,557	+		Ga0059261_1295	0.83	-0.3
1,360,557	+		Ga0059261_1295	0.83	+0.7
1,360,558	-		Ga0059261_1295	0.83	-2.2
1,360,600	+		Ga0059261_1295	0.85	-1.2
1,360,601	-		Ga0059261_1295	0.85	+0.3
1,360,617	+		Ga0059261_1295	0.85	-1.3
1,360,617	+		Ga0059261_1295	0.85	-2.2
1,360,617	+		Ga0059261_1295	0.85	+0.0
1,360,617	+				+2.3
1,360,618	-		Ga0059261_1295	0.85	+0.6
1,360,618	-		Ga0059261_1295	0.85	+0.7
1,360,618	-		Ga0059261_1295	0.85	-1.3
1,360,618	-		Ga0059261_1295	0.85	+0.3
1,360,618	-		Ga0059261_1295	0.85	-0.5
1,360,767	+				+2.1
1,360,767	+				-0.6
1,360,795	+				-0.1
1,360,824	+				+0.1
1,360,824	+				+2.2
1,360,824	+				-1.3
1,360,825	-				+0.1
1,360,825	-				+0.8
1,360,883	+				-1.2
1,360,883	+				-1.4
1,360,883	+				+1.0
1,360,883	+				+1.0
1,360,883	+				-2.6
1,360,884	-				-0.4
1,360,884	-				-1.4
1,360,884	-				+2.3
1,360,885	-				-2.7
1,361,271	+				+0.6
1,361,271	+				+1.3
1,361,405	+		Ga0059261_1296	0.22	+0.5
1,361,405	+		Ga0059261_1296	0.22	-2.0
1,361,406	-		Ga0059261_1296	0.22	+1.4
1,361,406	-		Ga0059261_1296	0.22	+1.6
1,361,406	-		Ga0059261_1296	0.22	+1.3
1,361,406	-		Ga0059261_1296	0.22	+1.3
1,361,426	+		Ga0059261_1296	0.24	+0.1
1,361,427	-		Ga0059261_1296	0.24	+0.1
1,361,427	-		Ga0059261_1296	0.24	-2.2
1,361,427	-		Ga0059261_1296	0.24	-1.8
1,361,450	+		Ga0059261_1296	0.26	+4.8
1,361,468	+		Ga0059261_1296	0.28	-1.4
1,361,468	+		Ga0059261_1296	0.28	-2.2
1,361,468	+		Ga0059261_1296	0.28	+2.2
1,361,468	+		Ga0059261_1296	0.28	-2.0
1,361,468	+		Ga0059261_1296	0.28	-1.5
1,361,468	+		Ga0059261_1296	0.28	-3.3
1,361,468	+		Ga0059261_1296	0.28	+0.7
1,361,468	+		Ga0059261_1296	0.28	+1.2
1,361,468	+		Ga0059261_1296	0.28	-0.7
1,361,469	-		Ga0059261_1296	0.28	-1.0
1,361,469	-		Ga0059261_1296	0.28	-1.3
1,361,469	-		Ga0059261_1296	0.28	+0.7
1,361,469	-		Ga0059261_1296	0.28	-0.7
1,361,483	+		Ga0059261_1296	0.30	-0.1
1,361,483	+		Ga0059261_1296	0.30	+0.7
1,361,483	+		Ga0059261_1296	0.30	-0.9
1,361,483	+		Ga0059261_1296	0.30	-2.0
1,361,483	+		Ga0059261_1296	0.30	+1.1
1,361,483	+		Ga0059261_1296	0.30	-0.9
1,361,483	+		Ga0059261_1296	0.30	-1.7
1,361,483	+		Ga0059261_1296	0.30	+2.0
1,361,483	+		Ga0059261_1296	0.30	+2.1
1,361,483	+		Ga0059261_1296	0.30	-2.4
1,361,483	+		Ga0059261_1296	0.30	+0.1
1,361,483	+				+2.3
1,361,484	-		Ga0059261_1296	0.30	-0.7
1,361,484	-		Ga0059261_1296	0.30	+0.2
1,361,484	-		Ga0059261_1296	0.30	-0.2
1,361,484	-		Ga0059261_1296	0.30	-0.7
1,361,484	-		Ga0059261_1296	0.30	+0.4
1,361,589	-		Ga0059261_1296	0.41	-0.0
1,361,592	-		Ga0059261_1296	0.41	-0.3
1,361,592	-		Ga0059261_1296	0.41	-0.9
1,361,592	-		Ga0059261_1296	0.41	-1.0
1,361,592	-		Ga0059261_1296	0.41	+1.1
1,361,600	+				+3.0
1,361,600	+		Ga0059261_1296	0.42	-2.2
1,361,600	+		Ga0059261_1296	0.42	-2.3
1,361,600	+		Ga0059261_1296	0.42	-0.0
1,361,601	-		Ga0059261_1296	0.42	-0.4
1,361,601	-		Ga0059261_1296	0.42	+0.2
1,361,601	-		Ga0059261_1296	0.42	+0.5
1,361,601	-		Ga0059261_1296	0.42	+0.6
1,361,601	-		Ga0059261_1296	0.42	-1.0
1,361,705	+		Ga0059261_1296	0.52	-1.6
1,361,729	+		Ga0059261_1296	0.55	+1.2
1,361,729	+		Ga0059261_1296	0.55	+3.1
1,361,730	-		Ga0059261_1296	0.55	+0.7
1,361,828	+		Ga0059261_1296	0.65	-0.8
1,361,828	+		Ga0059261_1296	0.65	+1.3
1,361,828	+		Ga0059261_1296	0.65	-0.3
1,361,828	+		Ga0059261_1296	0.65	-1.7
1,361,828	+		Ga0059261_1296	0.65	-0.3
1,361,829	-		Ga0059261_1296	0.65	-2.4
1,361,829	-		Ga0059261_1296	0.65	+0.8
1,361,829	-		Ga0059261_1296	0.65	-0.3
1,361,829	-		Ga0059261_1296	0.65	-0.2
1,361,829	-		Ga0059261_1296	0.65	-1.6
1,361,829	-		Ga0059261_1296	0.65	-1.6
1,361,829	-		Ga0059261_1296	0.65	+3.9
1,361,829	-		Ga0059261_1296	0.65	+0.2
1,361,829	-		Ga0059261_1296	0.65	-0.0
1,361,978	+		Ga0059261_1296	0.80	-2.3
1,361,978	+		Ga0059261_1296	0.80	-1.6
1,361,979	-		Ga0059261_1296	0.80	+1.5
1,361,979	-		Ga0059261_1296	0.80	-2.9
1,362,026	+		Ga0059261_1296	0.85	-1.8
1,362,026	+		Ga0059261_1296	0.85	-0.0
1,362,026	+		Ga0059261_1296	0.85	+0.7
1,362,026	+		Ga0059261_1296	0.85	-0.2
1,362,026	+		Ga0059261_1296	0.85	+0.1
1,362,026	+		Ga0059261_1296	0.85	-0.1
1,362,026	+				+1.3
1,362,026	+		Ga0059261_1296	0.85	-0.1
1,362,027	-		Ga0059261_1296	0.85	+0.2
1,362,027	-		Ga0059261_1296	0.85	+0.9
1,362,258	+				+0.7
1,362,258	+				-0.8
1,362,258	+				-3.1
1,362,258	+				-1.0
1,362,259	-				-0.9
1,362,259	-				+1.7
1,362,315	+				+0.3
1,362,315	+				+1.0
1,362,315	+				+3.0
1,362,315	+				-0.4
1,362,315	+				-1.7
1,362,316	-				+1.0
1,362,316	-				+1.7
1,362,316	-				+1.4
1,362,316	-				+0.3
1,362,316	-				-1.8
1,362,316	-				-1.0
1,362,316	-				-0.0
1,362,316	-				-0.2
1,362,316	-				-0.3
1,362,316	-				-0.9
1,362,418	-				-0.7
1,362,418	-				-0.7
1,362,418	-				-1.2
1,362,418	-				-1.7
1,362,588	+		Ga0059261_1297	0.17	-0.6
1,362,588	+		Ga0059261_1297	0.17	-1.6
1,362,588	+		Ga0059261_1297	0.17	+0.7
1,362,589	-		Ga0059261_1297	0.17	-0.2
1,362,750	+		Ga0059261_1297	0.25	-3.3
1,362,750	+		Ga0059261_1297	0.25	+0.7
1,362,750	+		Ga0059261_1297	0.25	+0.2
1,362,751	-		Ga0059261_1297	0.25	+1.5
1,362,751	-		Ga0059261_1297	0.25	+0.3
1,362,751	-		Ga0059261_1297	0.25	+0.6
1,362,770	-		Ga0059261_1297	0.26	-0.5
1,362,770	-		Ga0059261_1297	0.26	+1.2
1,362,844	+				+1.3
1,362,845	-		Ga0059261_1297	0.29	-0.3
1,362,845	-		Ga0059261_1297	0.29	-0.1
1,362,864	+		Ga0059261_1297	0.30	-0.3
1,362,864	+		Ga0059261_1297	0.30	-0.3
1,362,865	-		Ga0059261_1297	0.30	+1.6
1,362,933	+		Ga0059261_1297	0.33	+1.8
1,362,933	+		Ga0059261_1297	0.33	-2.6
1,362,933	+		Ga0059261_1297	0.33	+0.3
1,362,933	+		Ga0059261_1297	0.33	-1.3
1,362,934	-		Ga0059261_1297	0.33	+1.1
1,363,060	+		Ga0059261_1297	0.39	-2.2
1,363,060	+		Ga0059261_1297	0.39	-1.4
1,363,060	+		Ga0059261_1297	0.39	-0.6
1,363,060	+		Ga0059261_1297	0.39	+1.2
1,363,060	+		Ga0059261_1297	0.39	-3.2
1,363,060	+		Ga0059261_1297	0.39	+1.0
1,363,060	+		Ga0059261_1297	0.39	+1.7
1,363,060	+		Ga0059261_1297	0.39	+0.7
1,363,060	+		Ga0059261_1297	0.39	-0.5
1,363,060	+		Ga0059261_1297	0.39	-1.2
1,363,061	-		Ga0059261_1297	0.39	+1.1
1,363,061	-		Ga0059261_1297	0.39	-0.7
1,363,061	-		Ga0059261_1297	0.39	-0.8
1,363,061	-		Ga0059261_1297	0.39	+1.0
1,363,062	+		Ga0059261_1297	0.39	-1.7
1,363,062	+		Ga0059261_1297	0.39	-0.9
1,363,062	+		Ga0059261_1297	0.39	+1.2
1,363,062	+		Ga0059261_1297	0.39	-2.1
1,363,062	+		Ga0059261_1297	0.39	+0.9
1,363,063	-		Ga0059261_1297	0.39	-0.3
1,363,063	-		Ga0059261_1297	0.39	+2.8
1,363,063	-		Ga0059261_1297	0.39	+1.0
1,363,063	-		Ga0059261_1297	0.39	-0.3
1,363,141	+		Ga0059261_1297	0.43	+0.3
1,363,141	+		Ga0059261_1297	0.43	-0.3
1,363,141	+		Ga0059261_1297	0.43	-0.7
1,363,141	+		Ga0059261_1297	0.43	-1.6
1,363,141	+		Ga0059261_1297	0.43	+0.1
1,363,141	+		Ga0059261_1297	0.43	+1.8
1,363,141	+		Ga0059261_1297	0.43	-1.0
1,363,141	+		Ga0059261_1297	0.43	-1.3
1,363,141	+		Ga0059261_1297	0.43	-1.7
1,363,142	-		Ga0059261_1297	0.43	-0.1
1,363,142	-		Ga0059261_1297	0.43	-2.0
1,363,142	-		Ga0059261_1297	0.43	-1.1
1,363,142	-		Ga0059261_1297	0.43	-2.0
1,363,143	+		Ga0059261_1297	0.43	-0.6
1,363,143	+		Ga0059261_1297	0.43	+0.6