Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1166

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,195,357	+		Ga0059261_1165	0.63	-0.7
1,195,357	+		Ga0059261_1165	0.63	-1.3
1,195,396	+		Ga0059261_1165	0.64	-1.7
1,195,396	+		Ga0059261_1165	0.64	-0.5
1,195,456	+		Ga0059261_1165	0.67	-0.2
1,195,558	+		Ga0059261_1165	0.70	-1.3
1,195,558	+		Ga0059261_1165	0.70	+0.0
1,195,558	+		Ga0059261_1165	0.70	+1.4
1,195,559	-		Ga0059261_1165	0.70	-0.3
1,195,559	-		Ga0059261_1165	0.70	-2.6
1,195,624	+		Ga0059261_1165	0.73	-0.2
1,195,624	+		Ga0059261_1165	0.73	+2.9
1,195,625	-		Ga0059261_1165	0.73	-0.3
1,195,625	-		Ga0059261_1165	0.73	+0.4
1,195,694	-		Ga0059261_1165	0.76	-0.0
1,195,694	-		Ga0059261_1165	0.76	-0.0
1,195,694	-		Ga0059261_1165	0.76	-2.0
1,195,708	+		Ga0059261_1165	0.76	+2.3
1,195,708	+		Ga0059261_1165	0.76	+1.8
1,195,708	+		Ga0059261_1165	0.76	+1.6
1,195,708	+		Ga0059261_1165	0.76	-1.0
1,195,708	+		Ga0059261_1165	0.76	+1.7
1,195,709	-		Ga0059261_1165	0.76	+1.4
1,195,709	-		Ga0059261_1165	0.76	+0.4
1,195,709	-		Ga0059261_1165	0.76	-1.6
1,195,709	-		Ga0059261_1165	0.76	-0.2
1,195,709	-				+2.3
1,195,709	-		Ga0059261_1165	0.76	+0.1
1,195,709	-		Ga0059261_1165	0.76	-0.6
1,195,709	-		Ga0059261_1165	0.76	-0.4
1,195,709	-		Ga0059261_1165	0.76	+0.4
1,195,711	+		Ga0059261_1165	0.76	+0.4
1,195,712	-		Ga0059261_1165	0.76	-0.6
1,195,774	+		Ga0059261_1165	0.79	+1.2
1,195,774	+		Ga0059261_1165	0.79	-0.2
1,195,775	-		Ga0059261_1165	0.79	+0.0
1,195,816	+		Ga0059261_1165	0.80	-1.0
1,195,879	+		Ga0059261_1165	0.83	+2.0
1,195,880	-		Ga0059261_1165	0.83	-0.1
1,195,880	-		Ga0059261_1165	0.83	-0.7
1,195,927	+		Ga0059261_1165	0.85	-1.5
1,195,927	+		Ga0059261_1165	0.85	+1.1
1,195,927	+		Ga0059261_1165	0.85	+2.8
1,195,927	+		Ga0059261_1165	0.85	+0.5
1,195,927	+		Ga0059261_1165	0.85	-1.8
1,195,927	+		Ga0059261_1165	0.85	-0.3
1,195,927	+		Ga0059261_1165	0.85	+0.5
1,195,927	+		Ga0059261_1165	0.85	-0.5
1,195,927	+		Ga0059261_1165	0.85	+1.5
1,195,927	+		Ga0059261_1165	0.85	-1.3
1,195,927	+		Ga0059261_1165	0.85	+1.4
1,195,927	+		Ga0059261_1165	0.85	+1.3
1,195,928	-		Ga0059261_1165	0.85	-1.4
1,195,928	-		Ga0059261_1165	0.85	+1.5
1,195,928	-		Ga0059261_1165	0.85	+0.3
1,195,928	-		Ga0059261_1165	0.85	-1.0
1,195,928	-		Ga0059261_1165	0.85	-0.7
1,195,928	-		Ga0059261_1165	0.85	+2.0
1,195,928	-		Ga0059261_1165	0.85	+0.7
1,195,928	-		Ga0059261_1165	0.85	-0.5
1,195,928	-		Ga0059261_1165	0.85	+1.3
1,195,928	-		Ga0059261_1165	0.85	+1.9
1,195,928	-		Ga0059261_1165	0.85	-0.0
1,195,928	-		Ga0059261_1165	0.85	-1.5
1,195,928	-		Ga0059261_1165	0.85	-0.7
1,195,928	-		Ga0059261_1165	0.85	-0.1
1,195,962	-		Ga0059261_1165	0.86	-1.5
1,195,963	+		Ga0059261_1165	0.86	+1.9
1,195,963	+		Ga0059261_1165	0.86	+1.7
1,195,963	+		Ga0059261_1165	0.86	+0.4
1,195,963	+		Ga0059261_1165	0.86	+1.4
1,195,963	+		Ga0059261_1165	0.86	-2.0
1,195,963	+		Ga0059261_1165	0.86	-0.4
1,195,963	+		Ga0059261_1165	0.86	+0.1
1,195,963	+		Ga0059261_1165	0.86	+0.1
1,195,963	+		Ga0059261_1165	0.86	-0.5
1,195,963	+		Ga0059261_1165	0.86	+1.5
1,195,963	+		Ga0059261_1165	0.86	+0.6
1,195,963	+		Ga0059261_1165	0.86	+0.5
1,195,963	+		Ga0059261_1165	0.86	+0.7
1,195,963	+		Ga0059261_1165	0.86	-0.2
1,195,963	+				+0.7
1,195,963	+		Ga0059261_1165	0.86	-0.2
1,195,963	+				+0.7
1,195,964	-		Ga0059261_1165	0.86	-1.6
1,195,964	-		Ga0059261_1165	0.86	-0.5
1,195,964	-		Ga0059261_1165	0.86	+0.8
1,195,964	-		Ga0059261_1165	0.86	-0.8
1,195,964	-		Ga0059261_1165	0.86	+0.4
1,195,964	-		Ga0059261_1165	0.86	+0.7
1,195,964	-		Ga0059261_1165	0.86	+1.1
1,195,964	-		Ga0059261_1165	0.86	-1.6
1,195,964	-		Ga0059261_1165	0.86	-0.3
1,195,964	-		Ga0059261_1165	0.86	-2.1
1,195,964	-				+1.0
1,195,964	-		Ga0059261_1165	0.86	+1.3
1,195,964	-		Ga0059261_1165	0.86	-0.5
1,195,964	-		Ga0059261_1165	0.86	+2.8
1,195,964	-		Ga0059261_1165	0.86	+1.0
1,195,964	-		Ga0059261_1165	0.86	+0.9
1,195,964	-		Ga0059261_1165	0.86	+1.6
1,196,151	+				-0.0
1,196,152	-				-0.2
1,196,152	-				-1.6
1,196,152	-				+0.2
1,196,152	-				+1.6
1,196,152	-				-0.3
1,196,152	-				+1.1
1,196,260	+				-1.0
1,196,260	+				-0.5
1,196,495	-				+1.1
1,196,972	+		Ga0059261_1166	0.25	+0.2
1,196,972	+		Ga0059261_1166	0.25	-0.3
1,196,972	+		Ga0059261_1166	0.25	-2.0
1,196,972	+		Ga0059261_1166	0.25	+1.2
1,196,972	+		Ga0059261_1166	0.25	-1.8
1,196,972	+		Ga0059261_1166	0.25	+0.7
1,196,972	+		Ga0059261_1166	0.25	-2.3
1,196,972	+		Ga0059261_1166	0.25	+0.3
1,196,972	+		Ga0059261_1166	0.25	-2.4
1,196,972	+		Ga0059261_1166	0.25	+0.5
1,196,972	+		Ga0059261_1166	0.25	+0.7
1,196,973	-		Ga0059261_1166	0.25	+0.1
1,196,973	-		Ga0059261_1166	0.25	-0.5
1,196,973	-		Ga0059261_1166	0.25	+0.2
1,197,024	+		Ga0059261_1166	0.27	+0.1
1,197,024	+		Ga0059261_1166	0.27	+1.2
1,197,024	+		Ga0059261_1166	0.27	-2.7
1,197,024	+		Ga0059261_1166	0.27	+0.1
1,197,024	+		Ga0059261_1166	0.27	+0.6
1,197,024	+				-0.3
1,197,024	+		Ga0059261_1166	0.27	+0.9
1,197,025	-		Ga0059261_1166	0.27	+0.4
1,197,025	-		Ga0059261_1166	0.27	-2.2
1,197,025	-		Ga0059261_1166	0.27	-0.2
1,197,025	-		Ga0059261_1166	0.27	-0.1
1,197,025	-		Ga0059261_1166	0.27	-1.0
1,197,025	-		Ga0059261_1166	0.27	-1.7
1,197,025	-		Ga0059261_1166	0.27	-0.7
1,197,025	-		Ga0059261_1166	0.27	+0.3
1,197,025	-		Ga0059261_1166	0.27	+0.9
1,197,025	-		Ga0059261_1166	0.27	-1.4
1,197,025	-		Ga0059261_1166	0.27	+1.3
1,197,025	-		Ga0059261_1166	0.27	-1.3
1,197,025	-		Ga0059261_1166	0.27	+0.6
1,197,025	-		Ga0059261_1166	0.27	+2.5
1,197,026	+		Ga0059261_1166	0.27	+0.9
1,197,027	-		Ga0059261_1166	0.27	-2.0
1,197,236	+		Ga0059261_1166	0.35	+0.7
1,197,272	+		Ga0059261_1166	0.37	+0.0
1,197,429	+		Ga0059261_1166	0.43	+0.5
1,197,614	+		Ga0059261_1166	0.50	+0.0
1,197,614	+		Ga0059261_1166	0.50	-0.9
1,197,626	+		Ga0059261_1166	0.51	-0.6
1,197,758	+		Ga0059261_1166	0.56	-0.4
1,197,758	+				+0.7
1,197,759	-		Ga0059261_1166	0.56	-3.5
1,197,759	-		Ga0059261_1166	0.56	+2.5
1,197,759	-		Ga0059261_1166	0.56	+3.5
1,197,788	+		Ga0059261_1166	0.57	-1.3
1,197,788	+		Ga0059261_1166	0.57	-0.4
1,197,788	+		Ga0059261_1166	0.57	-1.4
1,197,788	+		Ga0059261_1166	0.57	-1.3
1,197,788	+		Ga0059261_1166	0.57	+2.1
1,197,788	+		Ga0059261_1166	0.57	-1.5
1,197,788	+		Ga0059261_1166	0.57	-1.3
1,197,788	+		Ga0059261_1166	0.57	+0.1
1,197,788	+		Ga0059261_1166	0.57	+2.0
1,197,788	+		Ga0059261_1166	0.57	+0.3
1,197,788	+		Ga0059261_1166	0.57	-0.1
1,197,788	+		Ga0059261_1166	0.57	-0.5
1,197,788	+		Ga0059261_1166	0.57	+0.8
1,197,788	+		Ga0059261_1166	0.57	+0.1
1,197,788	+		Ga0059261_1166	0.57	-0.9
1,197,788	+		Ga0059261_1166	0.57	-0.0
1,197,788	+		Ga0059261_1166	0.57	-0.5
1,197,788	+		Ga0059261_1166	0.57	+1.7
1,197,788	+		Ga0059261_1166	0.57	-1.5
1,197,789	-		Ga0059261_1166	0.57	+1.1
1,197,789	-		Ga0059261_1166	0.57	+0.3
1,197,789	-		Ga0059261_1166	0.57	-1.6
1,197,789	-		Ga0059261_1166	0.57	-2.7
1,197,789	-		Ga0059261_1166	0.57	+1.5
1,197,789	-		Ga0059261_1166	0.57	+2.4
1,197,789	-		Ga0059261_1166	0.57	-2.2
1,197,789	-		Ga0059261_1166	0.57	-3.5
1,197,789	-		Ga0059261_1166	0.57	+0.4
1,197,789	-		Ga0059261_1166	0.57	-1.0
1,197,789	-		Ga0059261_1166	0.57	+1.0
1,197,789	-		Ga0059261_1166	0.57	-0.3
1,197,789	-		Ga0059261_1166	0.57	-0.1
1,197,789	-		Ga0059261_1166	0.57	-1.9
1,197,789	-		Ga0059261_1166	0.57	-0.5
1,197,789	-		Ga0059261_1166	0.57	-0.9
1,197,789	-		Ga0059261_1166	0.57	+1.6
1,197,789	-		Ga0059261_1166	0.57	-0.4
1,197,789	-		Ga0059261_1166	0.57	+0.7
1,198,007	+		Ga0059261_1166	0.66	+0.3
1,198,007	+		Ga0059261_1166	0.66	-0.0
1,198,007	+		Ga0059261_1166	0.66	+0.0
1,198,007	+		Ga0059261_1166	0.66	-1.8
1,198,008	-		Ga0059261_1166	0.66	+1.6
1,198,008	-		Ga0059261_1166	0.66	-0.3
1,198,119	+		Ga0059261_1166	0.71	-1.0
1,198,119	+		Ga0059261_1166	0.71	-0.0
1,198,119	+		Ga0059261_1166	0.71	+1.7
1,198,119	+		Ga0059261_1166	0.71	-1.5
1,198,119	+		Ga0059261_1166	0.71	-1.7
1,198,119	+		Ga0059261_1166	0.71	-2.0
1,198,119	+		Ga0059261_1166	0.71	-2.0
1,198,119	+		Ga0059261_1166	0.71	+0.9
1,198,120	-		Ga0059261_1166	0.71	-0.2
1,198,120	-		Ga0059261_1166	0.71	-1.3
1,198,120	-		Ga0059261_1166	0.71	+0.5
1,198,120	-		Ga0059261_1166	0.71	-2.0
1,198,120	-		Ga0059261_1166	0.71	+0.8
1,198,187	+		Ga0059261_1166	0.73	-0.8
1,198,187	+		Ga0059261_1166	0.73	-0.8
1,198,187	+		Ga0059261_1166	0.73	-0.9
1,198,188	-		Ga0059261_1166	0.73	-1.0
1,198,188	-		Ga0059261_1166	0.73	-1.7
1,198,188	-		Ga0059261_1166	0.73	-1.0
1,198,226	+		Ga0059261_1166	0.75	+1.1
1,198,226	+		Ga0059261_1166	0.75	+1.8
1,198,226	+		Ga0059261_1166	0.75	+0.1
1,198,226	+		Ga0059261_1166	0.75	+1.4
1,198,226	+		Ga0059261_1166	0.75	-0.3
1,198,226	+		Ga0059261_1166	0.75	+0.6
1,198,227	-		Ga0059261_1166	0.75	+0.8
1,198,227	-		Ga0059261_1166	0.75	-0.5
1,198,227	-		Ga0059261_1166	0.75	+0.2
1,198,227	-		Ga0059261_1166	0.75	-0.5
1,198,227	-		Ga0059261_1166	0.75	-1.0
1,198,227	-		Ga0059261_1166	0.75	-2.6
1,198,227	-		Ga0059261_1166	0.75	-1.5
1,198,227	-		Ga0059261_1166	0.75	-0.0
1,198,227	-		Ga0059261_1166	0.75	+1.3
1,198,227	-		Ga0059261_1166	0.75	-0.5
1,198,227	-		Ga0059261_1166	0.75	-1.0
1,198,227	-		Ga0059261_1166	0.75	+0.7
1,198,347	+		Ga0059261_1166	0.80	-1.4
1,198,348	-				+1.3
1,198,348	-				+1.3
1,198,348	-		Ga0059261_1166	0.80	-1.5
1,198,368	+		Ga0059261_1166	0.81	-2.0
1,198,369	-		Ga0059261_1166	0.81	+1.1
1,198,481	+		Ga0059261_1166	0.85	-1.3
1,198,481	+		Ga0059261_1166	0.85	+0.9
1,198,481	+		Ga0059261_1166	0.85	+0.9
1,198,481	+		Ga0059261_1166	0.85	+0.5
1,198,481	+		Ga0059261_1166	0.85	-1.5
1,198,481	+		Ga0059261_1166	0.85	+0.3
1,198,481	+		Ga0059261_1166	0.85	-1.8
1,198,481	+		Ga0059261_1166	0.85	-0.8
1,198,481	+		Ga0059261_1166	0.85	+1.6
1,198,481	+		Ga0059261_1166	0.85	-0.0
1,198,482	-		Ga0059261_1166	0.85	+0.8
1,198,482	-		Ga0059261_1166	0.85	-2.0
1,198,482	-		Ga0059261_1166	0.85	+0.5
1,198,482	-		Ga0059261_1166	0.85	-0.8
1,198,482	-		Ga0059261_1166	0.85	-0.5
1,198,482	-		Ga0059261_1166	0.85	+3.9
1,198,526	+		Ga0059261_1166	0.87	-0.5
1,198,527	-		Ga0059261_1166	0.87	-0.7
1,198,527	-		Ga0059261_1166	0.87	-1.1
1,198,577	+				+2.3
1,198,577	+		Ga0059261_1166	0.89	-1.3
1,198,578	-		Ga0059261_1166	0.89	+0.6
1,198,578	-		Ga0059261_1166	0.89	+1.2
1,198,578	-		Ga0059261_1166	0.89	+2.5
1,198,827	+				-0.7
1,198,827	+				+0.6
1,198,827	+				+1.3
1,198,827	+				-1.3
1,198,828	-				+2.4
1,198,828	-				-1.9
1,198,828	-				-0.4
1,198,828	-				+1.5
1,198,845	+				-0.7
1,198,846	-				-3.0
1,198,846	-				-0.8
1,198,846	-				-0.4
1,198,846	-				+0.4
1,198,867	+				-1.2
1,198,868	-				+0.7
1,198,969	+				-2.5
1,199,149	+		Ga0059261_1167	0.20	-0.9
1,199,149	+		Ga0059261_1167	0.20	-0.5
1,199,149	+		Ga0059261_1167	0.20	-0.9
1,199,149	+		Ga0059261_1167	0.20	-0.4
1,199,150	-		Ga0059261_1167	0.20	+3.0
1,199,150	-		Ga0059261_1167	0.20	-0.4
1,199,150	-		Ga0059261_1167	0.20	-1.0
1,199,150	-		Ga0059261_1167	0.20	+1.0
1,199,160	+		Ga0059261_1167	0.21	+0.1
1,199,207	+		Ga0059261_1167	0.25	-1.1
1,199,207	+		Ga0059261_1167	0.25	-0.4
1,199,212	+		Ga0059261_1167	0.26	-0.8
1,199,212	+		Ga0059261_1167	0.26	+2.9
1,199,212	+		Ga0059261_1167	0.26	+0.4
1,199,212	+		Ga0059261_1167	0.26	+0.2
1,199,212	+				+1.3
1,199,212	+		Ga0059261_1167	0.26	-1.4
1,199,212	+		Ga0059261_1167	0.26	-1.3
1,199,212	+		Ga0059261_1167	0.26	+1.0
1,199,213	-		Ga0059261_1167	0.26	+0.1
1,199,213	-		Ga0059261_1167	0.26	-1.3
1,199,213	-				+1.3
1,199,233	+		Ga0059261_1167	0.28	+0.5
1,199,233	+		Ga0059261_1167	0.28	+2.1
1,199,233	+		Ga0059261_1167	0.28	-1.9
1,199,233	+		Ga0059261_1167	0.28	-1.9
1,199,233	+		Ga0059261_1167	0.28	-2.0
1,199,233	+		Ga0059261_1167	0.28	+0.4
1,199,233	+		Ga0059261_1167	0.28	-0.1
1,199,233	+		Ga0059261_1167	0.28	+0.6
1,199,233	+		Ga0059261_1167	0.28	-1.9
1,199,234	-		Ga0059261_1167	0.28	-1.3
1,199,234	-		Ga0059261_1167	0.28	-0.1
1,199,234	-		Ga0059261_1167	0.28	-0.2
1,199,234	-		Ga0059261_1167	0.28	+0.9
1,199,234	-		Ga0059261_1167	0.28	+0.4
1,199,234	-		Ga0059261_1167	0.28	-1.8
1,199,234	-		Ga0059261_1167	0.28	+0.5
1,199,234	-		Ga0059261_1167	0.28	-0.2
1,199,234	-		Ga0059261_1167	0.28	+0.2
1,199,234	-		Ga0059261_1167	0.28	-0.4
1,199,277	+		Ga0059261_1167	0.32	+1.4
1,199,278	-		Ga0059261_1167	0.32	-1.4
1,199,412	-		Ga0059261_1167	0.44	-0.9
1,199,415	+		Ga0059261_1167	0.44	+1.1
1,199,415	+		Ga0059261_1167	0.44	+0.9
1,199,430	+		Ga0059261_1167	0.46	+0.9
1,199,430	+		Ga0059261_1167	0.46	-1.7
1,199,430	+		Ga0059261_1167	0.46	-3.1
1,199,430	+		Ga0059261_1167	0.46	-0.5
1,199,431	-		Ga0059261_1167	0.46	+0.4
1,199,431	-		Ga0059261_1167	0.46	-1.8
1,199,431	-		Ga0059261_1167	0.46	-2.9
1,199,431	-		Ga0059261_1167	0.46	-0.9
1,199,431	-		Ga0059261_1167	0.46	+0.3
1,199,431	-		Ga0059261_1167	0.46	-0.9
1,199,440	+		Ga0059261_1167	0.46	-0.6
1,199,440	+		Ga0059261_1167	0.46	-1.5
1,199,441	-		Ga0059261_1167	0.47	+3.1
1,199,441	-		Ga0059261_1167	0.47	+0.3
1,199,489	+		Ga0059261_1167	0.51	+3.4
1,199,489	+		Ga0059261_1167	0.51	-0.4
1,199,489	+		Ga0059261_1167	0.51	-1.8
1,199,490	-		Ga0059261_1167	0.51	+0.8
1,199,490	-		Ga0059261_1167	0.51	-1.4
1,199,553	+		Ga0059261_1167	0.57	-0.4
1,199,680	+		Ga0059261_1167	0.68	+0.9
1,199,680	+		Ga0059261_1167	0.68	+1.9
1,199,680	+		Ga0059261_1167	0.68	+0.4
1,199,680	+		Ga0059261_1167	0.68	+2.4
1,199,681	-		Ga0059261_1167	0.68	+1.1
1,199,681	-		Ga0059261_1167	0.68	+0.5
1,199,681	-		Ga0059261_1167	0.68	-1.5
1,199,692	+		Ga0059261_1167	0.69	+0.3
1,199,692	+		Ga0059261_1167	0.69	+0.2
1,199,693	-		Ga0059261_1167	0.69	+0.3
1,199,693	-		Ga0059261_1167	0.69	-1.2
1,199,849	+		Ga0059261_1167	0.84	+1.1