Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1129

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
1,153,848	+		Ga0059261_1128	0.13	-0.3
1,153,848	+		Ga0059261_1128	0.13	+2.8
1,153,849	-		Ga0059261_1128	0.13	-1.4
1,153,849	-		Ga0059261_1128	0.13	-2.0
1,153,871	+		Ga0059261_1128	0.16	+1.1
1,153,871	+		Ga0059261_1128	0.16	+2.0
1,153,871	+		Ga0059261_1128	0.16	+1.9
1,153,872	-		Ga0059261_1128	0.16	+1.1
1,153,872	-		Ga0059261_1128	0.16	-0.4
1,153,872	-		Ga0059261_1128	0.16	-1.0
1,153,872	-		Ga0059261_1128	0.16	-0.8
1,154,099	+		Ga0059261_1128	0.42	-1.4
1,154,099	+		Ga0059261_1128	0.42	-0.4
1,154,099	+		Ga0059261_1128	0.42	-0.3
1,154,099	+		Ga0059261_1128	0.42	-0.1
1,154,100	-		Ga0059261_1128	0.42	-0.6
1,154,101	+		Ga0059261_1128	0.42	-1.9
1,154,101	+		Ga0059261_1128	0.42	-0.6
1,154,101	+		Ga0059261_1128	0.42	-0.0
1,154,101	+		Ga0059261_1128	0.42	-2.4
1,154,101	+		Ga0059261_1128	0.42	-0.9
1,154,101	+		Ga0059261_1128	0.42	+0.5
1,154,102	-		Ga0059261_1128	0.42	+2.0
1,154,102	-		Ga0059261_1128	0.42	+0.8
1,154,140	+		Ga0059261_1128	0.46	+1.8
1,154,140	+		Ga0059261_1128	0.46	-0.5
1,154,140	+		Ga0059261_1128	0.46	+1.0
1,154,140	+		Ga0059261_1128	0.46	+0.5
1,154,141	-		Ga0059261_1128	0.46	-2.0
1,154,141	-		Ga0059261_1128	0.46	+0.9
1,154,141	-				+2.3
1,154,141	-		Ga0059261_1128	0.46	-0.5
1,154,249	-		Ga0059261_1128	0.59	+0.3
1,154,374	+		Ga0059261_1128	0.73	+1.6
1,154,374	+		Ga0059261_1128	0.73	-1.3
1,154,374	+		Ga0059261_1128	0.73	+2.4
1,154,374	+		Ga0059261_1128	0.73	-0.3
1,154,374	+		Ga0059261_1128	0.73	+1.5
1,154,374	+		Ga0059261_1128	0.73	-0.0
1,154,374	+		Ga0059261_1128	0.73	-0.7
1,154,375	-		Ga0059261_1128	0.73	-0.3
1,154,375	-		Ga0059261_1128	0.73	+0.8
1,154,375	-		Ga0059261_1128	0.73	-1.3
1,154,375	-		Ga0059261_1128	0.73	+0.9
1,154,375	-		Ga0059261_1128	0.73	+2.1
1,154,375	-		Ga0059261_1128	0.73	-0.4
1,154,375	-		Ga0059261_1128	0.73	-2.5
1,154,375	-		Ga0059261_1128	0.73	+1.3
1,154,375	-		Ga0059261_1128	0.73	+1.6
1,154,375	-		Ga0059261_1128	0.73	+0.9
1,154,394	+		Ga0059261_1128	0.75	-1.4
1,154,394	+		Ga0059261_1128	0.75	+0.4
1,154,394	+		Ga0059261_1128	0.75	+0.7
1,154,395	-				+2.3
1,154,395	-		Ga0059261_1128	0.75	+3.1
1,154,446	+		Ga0059261_1128	0.81	+2.6
1,154,446	+		Ga0059261_1128	0.81	-0.7
1,154,447	-		Ga0059261_1128	0.81	+3.5
1,154,447	-		Ga0059261_1128	0.81	-1.3
1,154,447	-		Ga0059261_1128	0.81	+0.3
1,154,574	-				-0.6
1,154,574	-				+0.4
1,154,687	+				-0.5
1,154,794	+				+0.1
1,154,796	+				+0.6
1,154,796	+				+0.5
1,154,796	+				+2.4
1,154,797	-				-0.7
1,154,797	-				-0.7
1,154,797	-				-3.3
1,154,967	+		Ga0059261_1129	0.21	+1.0
1,154,967	+		Ga0059261_1129	0.21	-1.8
1,154,968	-		Ga0059261_1129	0.21	-0.5
1,155,060	+		Ga0059261_1129	0.31	+1.8
1,155,060	+		Ga0059261_1129	0.31	+0.6
1,155,060	+		Ga0059261_1129	0.31	+1.0
1,155,060	+		Ga0059261_1129	0.31	+0.9
1,155,061	-		Ga0059261_1129	0.31	+0.5
1,155,061	-		Ga0059261_1129	0.31	-0.6
1,155,096	+		Ga0059261_1129	0.34	+0.5
1,155,096	+		Ga0059261_1129	0.34	-0.0
1,155,096	+		Ga0059261_1129	0.34	-0.8
1,155,096	+		Ga0059261_1129	0.34	-0.1
1,155,096	+		Ga0059261_1129	0.34	+1.1
1,155,273	+		Ga0059261_1129	0.52	+0.3
1,155,273	+		Ga0059261_1129	0.52	-0.9
1,155,274	-		Ga0059261_1129	0.52	+1.5
1,155,274	-		Ga0059261_1129	0.52	+0.6
1,155,384	+		Ga0059261_1129	0.63	-0.5
1,155,384	+		Ga0059261_1129	0.63	-0.3
1,155,385	-		Ga0059261_1129	0.64	-0.3
1,155,385	-		Ga0059261_1129	0.64	-1.5
1,155,385	-		Ga0059261_1129	0.64	-0.3
1,155,385	-		Ga0059261_1129	0.64	+0.6
1,155,385	-		Ga0059261_1129	0.64	+1.1
1,155,402	+		Ga0059261_1129	0.65	-1.1
1,155,403	-		Ga0059261_1129	0.65	-1.2
1,155,625	+		Ga0059261_1129	0.88	+0.2
1,155,626	-		Ga0059261_1129	0.88	-1.5
1,155,626	-		Ga0059261_1129	0.88	+0.1
1,155,687	+				-1.3
1,155,687	+				-0.6
1,155,687	+				+1.4
1,155,687	+				-0.7
1,155,687	+				+2.9
1,155,687	+				-3.5
1,155,687	+				-1.5
1,155,687	+				-1.0
1,155,687	+				+1.0
1,155,688	-				+0.9
1,155,688	-				-1.6
1,155,688	-				+1.3
1,155,688	-				+0.8
1,155,688	-				-0.3
1,155,688	-				-0.0
1,155,688	-				-0.5
1,155,993	+		Ga0059261_1130	0.57	+2.3
1,155,993	+		Ga0059261_1130	0.57	-0.5
1,155,993	+		Ga0059261_1130	0.57	-0.0
1,155,993	+		Ga0059261_1130	0.57	-0.3
1,155,993	+		Ga0059261_1130	0.57	+1.0
1,155,993	+		Ga0059261_1130	0.57	-1.0
1,155,993	+		Ga0059261_1130	0.57	+0.6
1,155,993	+		Ga0059261_1130	0.57	+2.0
1,155,993	+				+2.3
1,155,994	-		Ga0059261_1130	0.58	+3.4
1,155,994	-		Ga0059261_1130	0.58	+0.6
1,155,994	-		Ga0059261_1130	0.58	-0.8
1,155,994	-		Ga0059261_1130	0.58	-0.8
1,155,994	-		Ga0059261_1130	0.58	-1.5
1,155,994	-		Ga0059261_1130	0.58	+1.5
1,155,995	+		Ga0059261_1130	0.58	-2.6
1,155,995	+		Ga0059261_1130	0.58	-1.0
1,155,995	+		Ga0059261_1130	0.58	+0.5
1,155,995	+		Ga0059261_1130	0.58	-0.7
1,155,995	+		Ga0059261_1130	0.58	+1.4
1,155,996	-		Ga0059261_1130	0.58	-0.3
1,155,996	-		Ga0059261_1130	0.58	-2.0
1,155,996	-		Ga0059261_1130	0.58	-0.5
1,155,996	-		Ga0059261_1130	0.58	-0.3
1,156,011	+		Ga0059261_1130	0.61	+2.3
1,156,011	+		Ga0059261_1130	0.61	-1.6
1,156,012	-		Ga0059261_1130	0.62	+0.1
1,156,012	-		Ga0059261_1130	0.62	+2.0
1,156,012	-		Ga0059261_1130	0.62	-2.1
1,156,012	-		Ga0059261_1130	0.62	+0.2
1,156,012	-		Ga0059261_1130	0.62	-2.5
1,156,012	-		Ga0059261_1130	0.62	+0.3
1,156,012	-		Ga0059261_1130	0.62	+0.5
1,156,012	-		Ga0059261_1130	0.62	-0.1
1,156,012	-		Ga0059261_1130	0.62	+1.5
1,156,166	+				-0.4
1,156,166	+				-0.4
1,156,166	+				+0.1
1,156,166	+				+0.2
1,156,166	+				+0.7
1,156,167	-				-0.7
1,156,167	-				+1.0
1,156,167	-				-1.0
1,156,321	+		Ga0059261_1131	0.11	+0.8
1,156,514	+		Ga0059261_1131	0.25	+0.1
1,156,514	+		Ga0059261_1131	0.25	+0.3
1,156,514	+		Ga0059261_1131	0.25	-1.4
1,156,514	+		Ga0059261_1131	0.25	-2.0
1,156,515	-		Ga0059261_1131	0.26	+1.3
1,156,658	+		Ga0059261_1131	0.36	+0.2
1,156,659	-		Ga0059261_1131	0.36	+1.1
1,156,659	-		Ga0059261_1131	0.36	+1.6
1,156,660	+		Ga0059261_1131	0.37	-1.8
1,156,660	+		Ga0059261_1131	0.37	-1.3
1,156,660	+		Ga0059261_1131	0.37	-0.7
1,156,661	-		Ga0059261_1131	0.37	-0.4
1,156,661	-		Ga0059261_1131	0.37	-1.2
1,156,661	-		Ga0059261_1131	0.37	+0.7
1,156,661	-		Ga0059261_1131	0.37	-0.0
1,156,661	-		Ga0059261_1131	0.37	+1.3
1,156,661	-		Ga0059261_1131	0.37	-0.3