Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4012

Experiment: m.b. Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.004 mg/ml
78,946	+		Dshi_4010	0.87	+0.4
78,985	+				-0.2
79,001	-				+0.8
79,005	-				+0.3
79,046	-				+0.1
79,048	+				+0.3
79,048	+				-0.3
79,052	+				-0.2
79,052	+				+0.4
79,053	+				+0.3
79,053	+				-0.0
79,077	-				+0.1
79,106	-				+1.1
79,117	-				-0.6
79,121	-				-0.4
79,141	+				+0.8
79,153	+				-0.9
79,159	+				-0.0
79,161	+				+0.6
79,196	-				+0.4
79,197	+				+0.3
79,198	+				+0.1
79,204	-				+0.4
79,215	-				-1.0
79,273	+				-0.2
79,281	-				+1.1
79,320	+				+0.6
79,320	+				-0.8
79,320	+				-1.6
79,328	-				-0.7
79,328	-				+0.4
79,328	-				+0.6
79,368	-				+0.1
79,377	+				+1.4
79,385	-				-0.5
79,385	-				+0.3
79,389	+				-0.2
79,427	-		Dshi_4011	0.13	-0.2
79,449	+		Dshi_4011	0.17	-1.2
79,457	-		Dshi_4011	0.18	-0.2
79,470	+		Dshi_4011	0.21	+0.5
79,470	+		Dshi_4011	0.21	+0.5
79,478	-		Dshi_4011	0.23	+0.2
79,478	-		Dshi_4011	0.23	+0.4
79,478	-		Dshi_4011	0.23	+0.5
79,503	-		Dshi_4011	0.27	+0.1
79,538	+		Dshi_4011	0.34	-0.5
79,580	-		Dshi_4011	0.42	+0.3
79,618	-		Dshi_4011	0.50	-0.7
79,618	-		Dshi_4011	0.50	-0.9
79,677	+		Dshi_4011	0.61	-0.0
79,686	+		Dshi_4011	0.63	+0.4
79,695	+		Dshi_4011	0.64	+0.7
79,750	-		Dshi_4011	0.75	-0.3
79,750	-		Dshi_4011	0.75	+0.8
79,793	-		Dshi_4011	0.83	-0.2
79,864	+				+0.3
79,864	+				-0.3
79,872	-				+0.1
79,885	-				-0.2
79,945	+		Dshi_4012	0.21	-1.5
79,968	+		Dshi_4012	0.28	+0.2
80,057	+		Dshi_4012	0.55	-0.1
80,071	-		Dshi_4012	0.60	-0.0
80,116	-		Dshi_4012	0.73	-1.5
80,120	-		Dshi_4012	0.75	+0.1
80,135	-		Dshi_4012	0.79	-0.2
80,313	-				-0.2
80,323	-				+1.1
80,358	+				-1.1
80,392	-				-0.1
80,397	-		Dshi_4013	0.10	-1.7
80,402	-		Dshi_4013	0.11	+0.1
80,403	-		Dshi_4013	0.11	+0.2
80,403	-		Dshi_4013	0.11	+1.5
80,453	-		Dshi_4013	0.19	-0.1
80,475	+		Dshi_4013	0.22	+0.4
80,480	+		Dshi_4013	0.23	-0.0
80,485	+		Dshi_4013	0.24	-0.3
80,572	+		Dshi_4013	0.37	-0.4
80,690	-		Dshi_4013	0.55	+1.1
80,723	-		Dshi_4013	0.60	+0.3
80,802	+		Dshi_4013	0.72	+0.0
80,846	-		Dshi_4013	0.79	-0.2
80,848	-		Dshi_4013	0.79	-0.2
80,858	+		Dshi_4013	0.81	+0.1
80,867	+		Dshi_4013	0.82	-0.4
80,867	+		Dshi_4013	0.82	+0.3
80,867	+		Dshi_4013	0.82	+0.2
80,875	-		Dshi_4013	0.83	-0.5
80,875	-		Dshi_4013	0.83	-0.2
80,875	-		Dshi_4013	0.83	+0.1
80,877	+		Dshi_4013	0.84	-0.4
80,885	-		Dshi_4013	0.85	-0.0
80,899	+		Dshi_4013	0.87	+0.4
80,906	+		Dshi_4013	0.88	-0.1
80,906	+		Dshi_4013	0.88	-0.5
80,906	+		Dshi_4013	0.88	+0.3
80,906	+		Dshi_4013	0.88	-0.1
80,913	-		Dshi_4013	0.89	+1.1
80,914	-		Dshi_4013	0.89	+0.4
80,914	-		Dshi_4013	0.89	+0.3
80,914	-		Dshi_4013	0.89	-0.2
80,919	-				-1.0
80,937	-				+1.1
80,971	-				+0.5
80,971	-				+0.2
80,979	+				+0.4
80,984	+				+0.4
80,992	-				+0.0
80,997	-				-0.3
81,031	+				+0.0
81,031	+				-0.6
81,033	+				-0.8
81,036	+				-1.5
81,039	-				-0.3
81,039	-				+0.7
81,039	-				-0.0
81,094	-		Dshi_4014	0.16	-1.1
81,096	-		Dshi_4014	0.16	-1.4
81,096	-		Dshi_4014	0.16	-0.6
81,096	-		Dshi_4014	0.16	+0.7
81,113	+		Dshi_4014	0.19	+0.7
81,121	-		Dshi_4014	0.20	-0.0
81,121	-		Dshi_4014	0.20	-1.3
81,171	+		Dshi_4014	0.27	+1.7