Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3383

Experiment: m.b. Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Sisomicin 0.004 mg/ml
3,558,440	+		Dshi_3382	0.69	-0.0
3,558,440	+		Dshi_3382	0.69	-0.2
3,558,440	+		Dshi_3382	0.69	+0.2
3,558,440	+		Dshi_3382	0.69	-0.9
3,558,448	-		Dshi_3382	0.69	+0.3
3,558,569	+		Dshi_3382	0.73	+0.2
3,558,577	-		Dshi_3382	0.73	+0.2
3,558,582	-		Dshi_3382	0.74	-1.6
3,558,716	-		Dshi_3382	0.78	-0.5
3,558,933	-		Dshi_3382	0.84	-1.0
3,558,953	+		Dshi_3382	0.85	-0.8
3,559,004	+		Dshi_3382	0.86	+0.4
3,559,004	+		Dshi_3382	0.86	-0.7
3,559,043	+		Dshi_3382	0.88	+0.1
3,559,096	-		Dshi_3382	0.89	-0.1
3,559,125	-				-0.0
3,559,184	+				-1.7
3,559,184	+				-1.0
3,559,271	+				+0.3
3,559,287	+				-0.0
3,559,321	-				+0.6
3,559,519	+		Dshi_3383	0.12	-0.0
3,559,583	-		Dshi_3383	0.21	-3.5
3,559,613	+		Dshi_3383	0.25	-2.3
3,559,836	-		Dshi_3383	0.57	-3.3
3,560,199	-				-3.5
3,560,225	+				+0.2
3,560,289	-				+1.0
3,560,309	+				-0.6
3,560,332	-				-0.1
3,560,358	-				-0.4
3,560,360	+				-0.0
3,560,368	-		Dshi_3384	0.10	-0.6
3,560,404	-		Dshi_3384	0.13	-0.0
3,560,406	+		Dshi_3384	0.13	-0.5
3,560,406	+		Dshi_3384	0.13	-0.3
3,560,414	-		Dshi_3384	0.13	-0.5
3,560,416	+		Dshi_3384	0.13	+0.3
3,560,519	-		Dshi_3384	0.20	-0.0
3,560,534	-		Dshi_3384	0.21	-0.9
3,560,625	+		Dshi_3384	0.26	-0.0
3,560,668	+		Dshi_3384	0.29	+1.0
3,560,676	-		Dshi_3384	0.30	+0.2
3,560,682	-		Dshi_3384	0.30	+0.6
3,560,684	+		Dshi_3384	0.30	-0.1
3,560,804	+		Dshi_3384	0.38	+0.1
3,560,879	+		Dshi_3384	0.42	+1.0
3,560,888	-		Dshi_3384	0.43	+0.5
3,560,895	+		Dshi_3384	0.43	+0.0
3,560,934	+		Dshi_3384	0.46	+0.1
3,560,944	+		Dshi_3384	0.46	+0.1
3,561,041	-		Dshi_3384	0.52	-0.0
3,561,088	+		Dshi_3384	0.55	+0.6
3,561,094	-		Dshi_3384	0.56	+0.3
3,561,096	-		Dshi_3384	0.56	-1.0
3,561,096	-		Dshi_3384	0.56	+1.2