Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1595

Experiment: MoYLS4 with Nitrite 0.025mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Nitrite 0.025mg/mL
1,677,410	+	cheA-1	DVU1594	0.58	-0.3
1,677,442	-	cheA-1	DVU1594	0.59	-0.7
1,677,463	-	cheA-1	DVU1594	0.60	+0.4
1,677,463	-	cheA-1	DVU1594	0.60	+0.2
1,677,677	-	cheA-1	DVU1594	0.70	-0.2
1,677,754	-	cheA-1	DVU1594	0.74	+0.0
1,677,754	-	cheA-1	DVU1594	0.74	+0.8
1,677,885	-	cheA-1	DVU1594	0.80	+0.0
1,677,903	-	cheA-1	DVU1594	0.81	-0.9
1,677,921	-	cheA-1	DVU1594	0.82	+0.1
1,677,926	+	cheA-1	DVU1594	0.82	-0.2
1,677,991	-	cheA-1	DVU1594	0.85	-0.2
1,678,018	+	cheA-1	DVU1594	0.86	-1.1
1,678,026	-	cheA-1	DVU1594	0.87	-0.4
1,678,067	+	cheA-1	DVU1594	0.89	+0.1
1,678,176	+				-0.5
1,678,262	-				-0.3
1,678,295	+				-1.6
1,678,303	-				-0.3
1,678,313	+				+0.8
1,678,318	+				-0.9
1,678,332	+				+0.9
1,678,458	+	cheR-1	DVU1595	0.14	+0.6
1,678,460	+	cheR-1	DVU1595	0.14	-0.4
1,678,524	+	cheR-1	DVU1595	0.22	-0.1
1,678,532	-	cheR-1	DVU1595	0.23	-0.7
1,678,532	-	cheR-1	DVU1595	0.23	+0.2
1,678,546	+	cheR-1	DVU1595	0.24	-1.7
1,678,546	+	cheR-1	DVU1595	0.24	-0.2
1,678,585	+	cheR-1	DVU1595	0.29	-0.7
1,678,692	-	cheR-1	DVU1595	0.41	-0.0
1,678,716	-	cheR-1	DVU1595	0.44	-0.3
1,678,716	-	cheR-1	DVU1595	0.44	-0.3
1,678,743	+	cheR-1	DVU1595	0.47	-0.0
1,678,749	-	cheR-1	DVU1595	0.47	-0.2
1,678,749	-	cheR-1	DVU1595	0.47	-0.0
1,678,753	+	cheR-1	DVU1595	0.48	-0.9
1,678,768	-	cheR-1	DVU1595	0.50	-0.3
1,678,827	-	cheR-1	DVU1595	0.56	-0.7
1,678,985	-	cheR-1	DVU1595	0.74	+0.0
1,679,076	-	cheR-1	DVU1595	0.85	-0.5
1,679,081	+	cheR-1	DVU1595	0.85	+0.1
1,679,162	+				-0.1
1,679,189	+				+0.3
1,679,204	+				-0.0
1,679,318	+				+0.1
1,679,374	-	cheB-1	DVU1596	0.15	-0.5
1,679,405	+	cheB-1	DVU1596	0.18	-0.2
1,679,413	-	cheB-1	DVU1596	0.19	-0.0
1,679,459	+	cheB-1	DVU1596	0.23	+0.2
1,679,492	+	cheB-1	DVU1596	0.26	-0.9
1,679,493	+	cheB-1	DVU1596	0.26	+0.1
1,679,529	+	cheB-1	DVU1596	0.30	-0.2
1,679,583	-	cheB-1	DVU1596	0.35	-0.2
1,679,624	+	cheB-1	DVU1596	0.38	-0.0
1,679,634	+	cheB-1	DVU1596	0.39	-0.2
1,679,634	-	cheB-1	DVU1596	0.39	+0.3
1,679,634	-	cheB-1	DVU1596	0.39	-1.0
1,679,694	+	cheB-1	DVU1596	0.45	-1.7
1,679,825	-	cheB-1	DVU1596	0.57	-0.9
1,679,830	+	cheB-1	DVU1596	0.58	+0.7
1,679,840	-	cheB-1	DVU1596	0.58	+0.1
1,679,930	-	cheB-1	DVU1596	0.67	+0.2
1,679,953	-	cheB-1	DVU1596	0.69	+0.1
1,679,988	+	cheB-1	DVU1596	0.72	+0.0
1,680,042	-	cheB-1	DVU1596	0.77	+0.6
1,680,067	-	cheB-1	DVU1596	0.80	+0.0
1,680,087	+	cheB-1	DVU1596	0.81	-0.2
1,680,162	+	cheB-1	DVU1596	0.88	+0.4
1,680,162	+	cheB-1	DVU1596	0.88	-0.1
1,680,181	+				+0.0