Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5339

Experiment: Hydrochloric Acid 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrochloric Acid 0.005 M
6,132,864	+		Pf6N2E2_5338	0.18	-0.8
6,132,864	+		Pf6N2E2_5338	0.18	-0.8
6,132,864	+		Pf6N2E2_5338	0.18	-0.5
6,132,864	+		Pf6N2E2_5338	0.18	-0.8
6,132,864	+		Pf6N2E2_5338	0.18	-0.3
6,132,865	-		Pf6N2E2_5338	0.18	-1.2
6,132,865	-		Pf6N2E2_5338	0.18	-0.3
6,132,972	+		Pf6N2E2_5338	0.26	-0.9
6,132,981	+		Pf6N2E2_5338	0.27	-0.8
6,132,981	+		Pf6N2E2_5338	0.27	+0.5
6,132,982	-		Pf6N2E2_5338	0.27	-1.7
6,133,060	-		Pf6N2E2_5338	0.34	+0.5
6,133,170	+		Pf6N2E2_5338	0.43	+0.2
6,133,171	-		Pf6N2E2_5338	0.43	+0.8
6,133,171	-		Pf6N2E2_5338	0.43	+0.2
6,133,365	+		Pf6N2E2_5338	0.59	-0.1
6,133,365	+		Pf6N2E2_5338	0.59	+0.5
6,133,365	+		Pf6N2E2_5338	0.59	+1.0
6,133,366	-		Pf6N2E2_5338	0.59	-1.2
6,133,368	+		Pf6N2E2_5338	0.59	+1.3
6,133,368	+		Pf6N2E2_5338	0.59	+0.3
6,133,382	+		Pf6N2E2_5338	0.60	+0.8
6,133,452	+		Pf6N2E2_5338	0.66	-0.1
6,133,452	+		Pf6N2E2_5338	0.66	+0.7
6,133,452	+		Pf6N2E2_5338	0.66	-0.1
6,133,453	-		Pf6N2E2_5338	0.66	+1.5
6,133,453	-		Pf6N2E2_5338	0.66	-0.1
6,133,453	-		Pf6N2E2_5338	0.66	+1.5
6,133,453	-		Pf6N2E2_5338	0.66	+1.1
6,133,453	-		Pf6N2E2_5338	0.66	-1.3
6,133,453	-		Pf6N2E2_5338	0.66	+2.7
6,133,524	+		Pf6N2E2_5338	0.72	+0.5
6,133,524	+		Pf6N2E2_5338	0.72	+0.8
6,133,540	-		Pf6N2E2_5338	0.73	+1.1
6,133,656	+		Pf6N2E2_5338	0.83	+0.0
6,133,782	+				-0.0
6,133,782	+				-0.8
6,133,791	+				+0.9
6,133,812	+				-0.9
6,133,905	+				+0.7
6,133,905	+				-0.5
6,133,996	+		Pf6N2E2_5339	0.17	+0.6
6,133,997	-		Pf6N2E2_5339	0.17	+1.1
6,134,009	+		Pf6N2E2_5339	0.19	-1.0
6,134,009	+		Pf6N2E2_5339	0.19	-0.8
6,134,009	+		Pf6N2E2_5339	0.19	+0.5
6,134,009	+		Pf6N2E2_5339	0.19	-1.5
6,134,009	+		Pf6N2E2_5339	0.19	+0.6
6,134,231	+		Pf6N2E2_5339	0.47	+0.7
6,134,231	+		Pf6N2E2_5339	0.47	-0.7
6,134,231	+		Pf6N2E2_5339	0.47	-0.5
6,134,232	-		Pf6N2E2_5339	0.47	-0.0
6,134,252	+		Pf6N2E2_5339	0.50	+0.2
6,134,252	+		Pf6N2E2_5339	0.50	-1.1
6,134,252	+		Pf6N2E2_5339	0.50	+1.6
6,134,252	+		Pf6N2E2_5339	0.50	+0.1
6,134,252	+		Pf6N2E2_5339	0.50	-1.4
6,134,253	-		Pf6N2E2_5339	0.50	-0.9
6,134,253	-		Pf6N2E2_5339	0.50	-1.3
6,134,319	+		Pf6N2E2_5339	0.58	+0.1
6,134,319	+		Pf6N2E2_5339	0.58	-2.1
6,134,349	+		Pf6N2E2_5339	0.62	-2.3
6,134,448	+		Pf6N2E2_5339	0.75	-1.0
6,134,448	+		Pf6N2E2_5339	0.75	-0.9
6,134,448	+		Pf6N2E2_5339	0.75	-0.8
6,134,449	-		Pf6N2E2_5339	0.75	+0.1
6,134,449	-		Pf6N2E2_5339	0.75	-1.1
6,134,458	+		Pf6N2E2_5339	0.76	+0.3
6,134,567	+				+2.1
6,134,567	+				+0.7
6,134,567	+				+0.5
6,134,567	+				-1.0
6,134,567	+				-0.3
6,134,567	+				-1.4
6,134,567	+				-2.6
6,134,567	+				+0.9
6,134,567	+				-1.2
6,134,567	+				-0.7
6,134,568	-				+1.1
6,134,568	-				-0.7
6,134,568	-				-1.5
6,134,568	-				+0.1
6,134,568	-				+0.1
6,134,571	+				+0.9
6,134,571	+				-0.2
6,134,571	+				-1.4
6,134,571	+				-0.9
6,134,571	+				-0.2
6,134,571	+				-0.6
6,134,571	+				+3.7
6,134,571	+				+1.1
6,134,571	+				+0.4
6,134,571	+				-0.3
6,134,571	+				-1.6
6,134,571	+				+0.6
6,134,571	+				+1.4
6,134,571	+				-1.0
6,134,571	+				-0.3
6,134,571	+				-1.7
6,134,572	-				+1.1
6,134,572	-				+1.1
6,134,572	-				+2.1
6,134,572	-				+0.5
6,134,572	-				+2.1
6,134,579	+				-2.7
6,134,580	-				-0.2
6,134,598	+				-0.5
6,134,624	+				-0.2
6,134,645	+				-0.2
6,134,653	+				-0.8
6,134,653	+				+0.6
6,134,653	+				+0.7
6,134,693	+				-0.2
6,134,693	+				-0.5
6,134,698	+				-0.5
6,134,698	+				-0.5
6,134,698	+				-0.3
6,134,698	+				-0.7
6,134,698	+				-0.1
6,134,898	+		Pf6N2E2_5340	0.17	+1.0
6,134,899	-		Pf6N2E2_5340	0.17	+1.4
6,135,012	+		Pf6N2E2_5340	0.35	+0.8
6,135,012	+		Pf6N2E2_5340	0.35	-0.5
6,135,013	-		Pf6N2E2_5340	0.36	-1.2
6,135,211	+		Pf6N2E2_5340	0.68	+1.3
6,135,269	-		Pf6N2E2_5340	0.77	+0.2
6,135,339	+		Pf6N2E2_5340	0.88	+1.1
6,135,339	+		Pf6N2E2_5340	0.88	+1.1
6,135,340	-		Pf6N2E2_5340	0.89	-0.7
6,135,340	-				+1.1
6,135,341	+		Pf6N2E2_5340	0.89	+0.8
6,135,341	+		Pf6N2E2_5340	0.89	+0.1
6,135,341	+		Pf6N2E2_5340	0.89	+1.1
6,135,341	+		Pf6N2E2_5340	0.89	-0.4
6,135,409	-				+0.7
6,135,415	+				+0.6
6,135,415	+				+0.1
6,135,415	+				+0.3
6,135,445	+				-1.1
6,135,445	+				+0.5
6,135,445	+				-0.5
6,135,445	+				+0.2
6,135,445	+				+1.6
6,135,446	-				-0.9
6,135,463	+				+0.7