Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3847

Experiment: Hydrochloric Acid 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrochloric Acid 0.005 M
4,479,687	+		Pf6N2E2_3846	0.14	-0.4
4,479,687	+		Pf6N2E2_3846	0.14	+0.1
4,479,687	+		Pf6N2E2_3846	0.14	+0.4
4,479,688	-		Pf6N2E2_3846	0.14	-0.1
4,479,688	-		Pf6N2E2_3846	0.14	+0.4
4,479,688	-		Pf6N2E2_3846	0.14	+0.9
4,479,781	-		Pf6N2E2_3846	0.23	-0.0
4,479,781	-		Pf6N2E2_3846	0.23	+0.8
4,479,781	-		Pf6N2E2_3846	0.23	+1.3
4,479,783	+		Pf6N2E2_3846	0.23	-0.2
4,479,783	+		Pf6N2E2_3846	0.23	-0.3
4,479,783	+		Pf6N2E2_3846	0.23	+0.9
4,479,783	+		Pf6N2E2_3846	0.23	-0.2
4,479,784	-		Pf6N2E2_3846	0.23	-0.1
4,479,784	-		Pf6N2E2_3846	0.23	+0.6
4,479,784	-		Pf6N2E2_3846	0.23	+0.1
4,479,784	-		Pf6N2E2_3846	0.23	+0.2
4,479,784	-		Pf6N2E2_3846	0.23	+0.2
4,480,074	+		Pf6N2E2_3846	0.50	-0.4
4,480,074	+		Pf6N2E2_3846	0.50	+1.3
4,480,075	-		Pf6N2E2_3846	0.50	+0.6
4,480,219	+		Pf6N2E2_3846	0.64	-1.8
4,480,219	+		Pf6N2E2_3846	0.64	+0.2
4,480,220	-		Pf6N2E2_3846	0.64	+0.3
4,480,220	-		Pf6N2E2_3846	0.64	+0.1
4,480,506	+				-0.4
4,480,506	+				+1.0
4,480,506	+				+0.6
4,480,507	-				+1.1
4,480,507	-				-0.3
4,480,507	-				+0.9
4,480,507	-				+0.7
4,480,507	-				-0.3
4,480,508	+				+1.4
4,480,509	-				+1.0
4,480,509	-				+1.3
4,480,688	-		Pf6N2E2_3847	0.32	-0.1
4,480,688	-		Pf6N2E2_3847	0.32	-1.0
4,480,691	+		Pf6N2E2_3847	0.33	-0.5
4,480,691	+		Pf6N2E2_3847	0.33	-1.8
4,480,692	-		Pf6N2E2_3847	0.33	+1.2
4,480,692	-		Pf6N2E2_3847	0.33	+0.4
4,480,692	-		Pf6N2E2_3847	0.33	-0.7
4,480,692	-		Pf6N2E2_3847	0.33	-1.4
4,480,692	-		Pf6N2E2_3847	0.33	+1.2
4,480,794	-		Pf6N2E2_3847	0.71	+0.2
4,480,835	+		Pf6N2E2_3847	0.86	+0.9
4,480,853	+				+0.3
4,480,857	+				+0.0
4,480,858	-				+0.8
4,480,871	+				+1.0
4,480,898	+				+0.2
4,480,919	+				-0.7
4,481,093	-				+0.4
4,481,132	+				-1.1
4,481,133	-				+0.5
4,481,221	+		Pf6N2E2_3848	0.16	-1.0
4,481,222	-		Pf6N2E2_3848	0.16	-1.3
4,481,222	-		Pf6N2E2_3848	0.16	-0.5
4,481,252	+		Pf6N2E2_3848	0.25	-0.6
4,481,300	+		Pf6N2E2_3848	0.40	+0.2
4,481,300	+		Pf6N2E2_3848	0.40	+0.9
4,481,300	+		Pf6N2E2_3848	0.40	+0.9
4,481,301	-		Pf6N2E2_3848	0.40	-0.7
4,481,302	+		Pf6N2E2_3848	0.41	-0.1
4,481,302	+		Pf6N2E2_3848	0.41	-0.4
4,481,302	+		Pf6N2E2_3848	0.41	-1.1
4,481,303	-		Pf6N2E2_3848	0.41	-1.2
4,481,303	-		Pf6N2E2_3848	0.41	+0.7
4,481,303	-		Pf6N2E2_3848	0.41	-0.7
4,481,303	-		Pf6N2E2_3848	0.41	+0.0
4,481,375	-		Pf6N2E2_3848	0.63	-0.1
4,481,423	+		Pf6N2E2_3848	0.77	-2.0
4,481,424	-		Pf6N2E2_3848	0.78	-0.1
4,481,430	+		Pf6N2E2_3848	0.79	+0.3
4,481,430	+		Pf6N2E2_3848	0.79	-0.7
4,481,430	+		Pf6N2E2_3848	0.79	+0.3
4,481,431	-		Pf6N2E2_3848	0.80	+1.2
4,481,431	-		Pf6N2E2_3848	0.80	+0.2
4,481,431	-		Pf6N2E2_3848	0.80	-0.5
4,481,487	+				-1.0
4,481,487	+				+0.1
4,481,488	-				+0.4
4,481,524	+				+1.2
4,481,524	+				+0.3
4,481,524	+				+0.4
4,481,525	-				-1.2
4,481,529	+				-0.1
4,481,529	+				-0.6
4,481,529	+				-1.0
4,481,529	+				+0.1
4,481,530	-				+0.2
4,481,530	-				-0.3
4,481,530	-				-1.4
4,481,530	-				+0.2
4,481,539	+				-1.0
4,481,834	+		Pf6N2E2_3849	0.67	+0.6