Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2185

Experiment: Hydrochloric Acid 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrochloric Acid 0.005 M
2,588,283	+		Pf6N2E2_2183	0.18	+1.1
2,588,284	-		Pf6N2E2_2183	0.18	-1.2
2,588,286	-		Pf6N2E2_2183	0.19	+1.1
2,588,328	+		Pf6N2E2_2183	0.25	-0.7
2,588,329	-		Pf6N2E2_2183	0.25	-0.2
2,588,338	-		Pf6N2E2_2183	0.26	-0.5
2,588,490	+		Pf6N2E2_2183	0.49	+0.1
2,588,503	+		Pf6N2E2_2183	0.51	+1.0
2,588,525	-		Pf6N2E2_2183	0.55	-0.7
2,588,574	-		Pf6N2E2_2183	0.62	-0.4
2,588,597	-		Pf6N2E2_2183	0.65	+0.4
2,588,597	-		Pf6N2E2_2183	0.65	-0.7
2,588,598	+		Pf6N2E2_2183	0.66	+0.7
2,588,598	+		Pf6N2E2_2183	0.66	-0.8
2,588,598	+		Pf6N2E2_2183	0.66	+1.0
2,588,598	+		Pf6N2E2_2183	0.66	+0.8
2,588,598	+		Pf6N2E2_2183	0.66	+0.8
2,588,598	+		Pf6N2E2_2183	0.66	-1.8
2,588,598	+		Pf6N2E2_2183	0.66	+1.1
2,588,599	-		Pf6N2E2_2183	0.66	-0.6
2,588,599	-		Pf6N2E2_2183	0.66	-1.1
2,588,599	-		Pf6N2E2_2183	0.66	+0.5
2,588,599	-		Pf6N2E2_2183	0.66	+1.9
2,588,599	-		Pf6N2E2_2183	0.66	-1.1
2,588,724	+		Pf6N2E2_2183	0.85	+0.7
2,588,724	+		Pf6N2E2_2183	0.85	+0.1
2,588,724	+		Pf6N2E2_2183	0.85	+1.1
2,588,724	+		Pf6N2E2_2183	0.85	+0.2
2,588,725	-		Pf6N2E2_2183	0.85	-0.0
2,588,725	-		Pf6N2E2_2183	0.85	-1.0
2,588,725	-		Pf6N2E2_2183	0.85	-0.9
2,588,725	-		Pf6N2E2_2183	0.85	+0.2
2,588,728	+		Pf6N2E2_2183	0.85	+0.1
2,588,729	-		Pf6N2E2_2183	0.85	-1.6
2,588,729	-		Pf6N2E2_2183	0.85	-0.2
2,588,746	+		Pf6N2E2_2183	0.88	+0.0
2,588,782	+				-0.3
2,588,782	+				-0.4
2,588,782	+				-0.3
2,588,782	+				-0.5
2,588,782	+				+0.1
2,588,783	-				+2.3
2,588,783	-				+0.5
2,588,850	+				-0.6
2,588,850	+				+0.5
2,589,021	+				+0.3
2,589,022	-				-0.9
2,589,022	-				+2.1
2,589,022	-				-0.3
2,589,024	+				-2.0
2,589,024	+				-1.0
2,589,025	-				+0.9
2,589,025	-				-0.9
2,589,241	+				+0.6
2,589,275	+				+0.4
2,589,276	-				+1.1
2,589,339	+		Pf6N2E2_2185	0.15	-0.9
2,589,339	+		Pf6N2E2_2185	0.15	+0.1
2,589,339	+		Pf6N2E2_2185	0.15	+0.4
2,589,339	+		Pf6N2E2_2185	0.15	+0.8
2,589,340	-		Pf6N2E2_2185	0.15	+0.5
2,589,486	-		Pf6N2E2_2185	0.32	+0.9
2,589,737	+		Pf6N2E2_2185	0.61	+0.4
2,589,738	-		Pf6N2E2_2185	0.61	+0.8
2,589,738	-		Pf6N2E2_2185	0.61	+0.7
2,589,738	-		Pf6N2E2_2185	0.61	-0.4
2,589,738	-		Pf6N2E2_2185	0.61	+0.7
2,589,738	-		Pf6N2E2_2185	0.61	-0.0
2,589,738	-		Pf6N2E2_2185	0.61	+1.5
2,589,842	+		Pf6N2E2_2185	0.73	-1.3
2,589,842	+		Pf6N2E2_2185	0.73	+0.6
2,589,842	+		Pf6N2E2_2185	0.73	+0.8
2,589,842	+		Pf6N2E2_2185	0.73	-0.8
2,589,842	+		Pf6N2E2_2185	0.73	+0.4
2,589,843	-		Pf6N2E2_2185	0.73	+0.5
2,589,858	+		Pf6N2E2_2185	0.75	+0.8
2,589,859	-		Pf6N2E2_2185	0.75	+3.3
2,589,892	-		Pf6N2E2_2185	0.79	+1.2
2,589,892	-		Pf6N2E2_2185	0.79	+0.3
2,589,892	-		Pf6N2E2_2185	0.79	-2.2
2,589,944	+		Pf6N2E2_2185	0.84	+0.5
2,589,944	+		Pf6N2E2_2185	0.84	-0.7
2,589,944	+		Pf6N2E2_2185	0.84	+0.3
2,589,945	-		Pf6N2E2_2185	0.85	+0.7
2,589,945	-		Pf6N2E2_2185	0.85	+0.1
2,589,945	-		Pf6N2E2_2185	0.85	-0.6
2,589,945	-		Pf6N2E2_2185	0.85	+1.5
2,589,945	-		Pf6N2E2_2185	0.85	+1.0
2,590,019	+				+0.3
2,590,019	+				-0.4
2,590,020	-				-1.3
2,590,020	-				-0.3
2,590,020	-				+0.2
2,590,020	-				+1.3
2,590,020	-				-0.1
2,590,037	+				+0.0
2,590,037	+				-0.1
2,590,037	+				-1.0
2,590,037	+				+0.4
2,590,037	+				-2.1
2,590,037	+				+0.3
2,590,038	-				-1.2
2,590,038	-				-1.9
2,590,038	-				-0.2
2,590,038	-				+2.0
2,590,058	+				-0.9
2,590,059	-				+0.9
2,590,059	-				+0.2
2,590,059	-				+0.2
2,590,059	-				-0.6
2,590,077	-				+0.5
2,590,224	-				-0.1
2,590,269	+				-0.5
2,590,269	+				+1.0
2,590,269	+				+0.4
2,590,269	+				+0.5
2,590,269	+				+0.3
2,590,269	+				+0.2
2,590,269	+				+0.1
2,590,269	+				+0.7
2,590,269	+				-0.5
2,590,269	+				-0.8
2,590,270	-				-0.9
2,590,270	-				+0.8
2,590,270	-				-0.1
2,590,270	-				+1.2
2,590,270	-				+0.2
2,590,353	+				-0.3
2,590,353	+				-0.4
2,590,354	-				-0.0
2,590,354	-				-1.2
2,590,354	-				-0.4
2,590,354	-				-0.3
2,590,354	-				-0.9
2,590,359	+		Pf6N2E2_2186	0.10	+2.4
2,590,359	+		Pf6N2E2_2186	0.10	-0.1
2,590,359	+		Pf6N2E2_2186	0.10	+0.8
2,590,359	+		Pf6N2E2_2186	0.10	+1.3
2,590,360	-		Pf6N2E2_2186	0.10	+1.0
2,590,360	-		Pf6N2E2_2186	0.10	+0.5
2,590,360	-		Pf6N2E2_2186	0.10	+0.4
2,590,360	-		Pf6N2E2_2186	0.10	-1.8
2,590,360	-		Pf6N2E2_2186	0.10	-0.4
2,590,360	-		Pf6N2E2_2186	0.10	+0.2
2,590,507	-		Pf6N2E2_2186	0.22	-0.9
2,590,507	-		Pf6N2E2_2186	0.22	-0.5
2,590,507	-		Pf6N2E2_2186	0.22	+0.7
2,590,507	-		Pf6N2E2_2186	0.22	+0.2