Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1824

Experiment: Hydrochloric Acid 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrochloric Acid 0.005 M
2,158,674	-		Pf6N2E2_1823	0.53	+1.1
2,158,674	-		Pf6N2E2_1823	0.53	+0.6
2,158,676	-		Pf6N2E2_1823	0.53	-0.1
2,158,676	-		Pf6N2E2_1823	0.53	-0.6
2,158,676	-		Pf6N2E2_1823	0.53	-0.8
2,158,676	-		Pf6N2E2_1823	0.53	-0.3
2,158,711	+		Pf6N2E2_1823	0.56	-1.3
2,158,711	+		Pf6N2E2_1823	0.56	+0.8
2,158,711	+		Pf6N2E2_1823	0.56	+0.4
2,158,711	+		Pf6N2E2_1823	0.56	+1.5
2,158,712	-		Pf6N2E2_1823	0.56	-1.5
2,158,723	+		Pf6N2E2_1823	0.57	-2.2
2,158,723	+		Pf6N2E2_1823	0.57	+0.0
2,158,723	+		Pf6N2E2_1823	0.57	-1.7
2,159,002	+		Pf6N2E2_1823	0.81	+1.0
2,159,024	+		Pf6N2E2_1823	0.83	-0.7
2,159,024	+		Pf6N2E2_1823	0.83	+0.0
2,159,025	-		Pf6N2E2_1823	0.83	-0.5
2,159,025	-		Pf6N2E2_1823	0.83	-0.1
2,159,026	+		Pf6N2E2_1823	0.83	-0.1
2,159,026	+		Pf6N2E2_1823	0.83	-0.1
2,159,026	+		Pf6N2E2_1823	0.83	-0.1
2,159,027	-		Pf6N2E2_1823	0.83	-0.8
2,159,027	-		Pf6N2E2_1823	0.83	-0.4
2,159,027	-		Pf6N2E2_1823	0.83	+0.1
2,159,195	-				+0.8
2,159,198	-				-0.1
2,159,198	-				-1.0
2,159,198	-				+2.8
2,159,226	-				+0.3
2,159,226	-				+0.3
2,159,226	-				-0.3
2,159,264	+				+1.8
2,159,265	-				+1.5
2,159,291	-				-0.5
2,159,291	-				+0.3
2,159,387	-				+2.2
2,159,481	+				-2.1
2,159,481	+				-0.8
2,159,482	-				-0.3
2,159,482	-				-1.0
2,159,482	-				-1.7
2,159,560	-				+0.4
2,159,664	+		Pf6N2E2_1824	0.23	-0.7
2,159,665	-		Pf6N2E2_1824	0.23	-0.1
2,159,773	-		Pf6N2E2_1824	0.77	-0.5
2,159,831	+				+0.8
2,159,982	+				-1.4
2,159,982	+				+0.8
2,159,982	+				+0.7
2,159,983	-				+1.7
2,159,983	-				-0.3
2,159,983	-				-1.2
2,159,983	-				-0.5
2,159,983	-				-0.7
2,159,983	-				+1.2
2,159,983	-				-0.4
2,159,983	-				+0.6
2,159,989	-				-1.3
2,159,989	-				+0.4
2,159,989	-				-0.2
2,159,989	-				+1.1
2,160,017	+		Pf6N2E2_1825	0.11	-0.1
2,160,018	-		Pf6N2E2_1825	0.11	+0.9
2,160,018	-		Pf6N2E2_1825	0.11	+0.1
2,160,018	-		Pf6N2E2_1825	0.11	-0.3
2,160,197	-		Pf6N2E2_1825	0.34	-2.3
2,160,291	-		Pf6N2E2_1825	0.46	+0.8
2,160,579	+		Pf6N2E2_1825	0.84	+0.8
2,160,713	+				-0.8
2,160,732	+				-0.4
2,160,732	+				+2.2
2,160,759	-				+0.3