Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1540

Experiment: Hydrochloric Acid 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrochloric Acid 0.005 M
1,798,148	-		Pf6N2E2_1538	0.77	-0.6
1,798,148	-		Pf6N2E2_1538	0.77	+0.4
1,798,148	-		Pf6N2E2_1538	0.77	+1.1
1,798,203	+		Pf6N2E2_1538	0.81	+0.6
1,798,345	-				+0.2
1,798,345	-				-0.1
1,798,386	-				+0.3
1,798,655	+		Pf6N2E2_1539	0.30	-2.1
1,798,655	+		Pf6N2E2_1539	0.30	-0.7
1,798,691	+		Pf6N2E2_1539	0.35	-0.3
1,798,692	-		Pf6N2E2_1539	0.36	+0.6
1,798,692	-		Pf6N2E2_1539	0.36	-0.4
1,798,692	-		Pf6N2E2_1539	0.36	+0.3
1,798,692	-		Pf6N2E2_1539	0.36	-1.0
1,798,707	+		Pf6N2E2_1539	0.38	+0.4
1,798,708	-		Pf6N2E2_1539	0.38	-0.7
1,798,827	-		Pf6N2E2_1539	0.56	+0.2
1,798,858	-		Pf6N2E2_1539	0.61	-0.3
1,799,043	+		Pf6N2E2_1539	0.89	+1.0
1,799,043	+		Pf6N2E2_1539	0.89	+0.2
1,799,043	+		Pf6N2E2_1539	0.89	+0.5
1,799,043	+		Pf6N2E2_1539	0.89	+0.3
1,799,044	-		Pf6N2E2_1539	0.89	+0.0
1,799,046	-		Pf6N2E2_1539	0.89	-0.1
1,799,046	-		Pf6N2E2_1539	0.89	-1.3
1,799,108	-				-0.7
1,799,108	-				+0.5
1,799,259	-		Pf6N2E2_1540	0.20	-1.3
1,799,259	-		Pf6N2E2_1540	0.20	-1.0
1,799,261	-		Pf6N2E2_1540	0.20	-1.0
1,799,297	-		Pf6N2E2_1540	0.26	-0.8
1,799,423	-		Pf6N2E2_1540	0.45	-1.2
1,799,423	-		Pf6N2E2_1540	0.45	-0.4
1,799,657	-		Pf6N2E2_1540	0.82	-0.5
1,799,663	+		Pf6N2E2_1540	0.83	-0.8
1,799,663	+		Pf6N2E2_1540	0.83	-0.5
1,799,907	+		Pf6N2E2_1541	0.17	-0.2
1,799,908	-		Pf6N2E2_1541	0.17	-0.3
1,799,908	-		Pf6N2E2_1541	0.17	-1.0
1,799,908	-		Pf6N2E2_1541	0.17	-0.5
1,800,047	+		Pf6N2E2_1541	0.34	-0.1
1,800,048	-		Pf6N2E2_1541	0.34	-0.1
1,800,051	+		Pf6N2E2_1541	0.35	+0.1
1,800,051	+		Pf6N2E2_1541	0.35	+0.9
1,800,051	+		Pf6N2E2_1541	0.35	-0.4
1,800,051	+		Pf6N2E2_1541	0.35	+1.1
1,800,051	+		Pf6N2E2_1541	0.35	+0.2
1,800,051	+		Pf6N2E2_1541	0.35	-0.5
1,800,052	-		Pf6N2E2_1541	0.35	-1.2
1,800,052	-		Pf6N2E2_1541	0.35	+0.1
1,800,052	-		Pf6N2E2_1541	0.35	-1.3
1,800,052	-		Pf6N2E2_1541	0.35	+4.6
1,800,052	-		Pf6N2E2_1541	0.35	-2.3
1,800,132	+		Pf6N2E2_1541	0.45	-0.2
1,800,165	+		Pf6N2E2_1541	0.49	+1.2
1,800,166	-		Pf6N2E2_1541	0.49	-1.3
1,800,166	-		Pf6N2E2_1541	0.49	+1.1
1,800,375	-		Pf6N2E2_1541	0.75	-0.9
1,800,706	+		Pf6N2E2_1542	0.21	+0.2
1,800,716	+		Pf6N2E2_1542	0.22	-1.9
1,800,716	+		Pf6N2E2_1542	0.22	+0.8
1,800,717	-		Pf6N2E2_1542	0.22	-1.4
1,800,717	-		Pf6N2E2_1542	0.22	+0.5
1,800,751	+		Pf6N2E2_1542	0.27	-0.3