Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_101

Experiment: Hydrochloric Acid 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrochloric Acid 0.005 M
144,511	+		Pf6N2E2_100	0.30	-0.5
144,511	+		Pf6N2E2_100	0.30	+1.7
144,512	-		Pf6N2E2_100	0.30	+0.7
144,512	-		Pf6N2E2_100	0.30	-0.4
144,600	+		Pf6N2E2_100	0.37	-1.2
144,610	+		Pf6N2E2_100	0.38	+0.1
144,610	+		Pf6N2E2_100	0.38	+0.8
144,610	+		Pf6N2E2_100	0.38	+0.1
144,631	+		Pf6N2E2_100	0.39	-1.7
144,827	-		Pf6N2E2_100	0.56	-0.6
144,900	+		Pf6N2E2_100	0.62	-1.0
144,901	-		Pf6N2E2_100	0.62	+0.2
144,951	+		Pf6N2E2_100	0.66	-1.2
144,951	+		Pf6N2E2_100	0.66	+0.9
144,961	+		Pf6N2E2_100	0.67	+0.9
144,979	+		Pf6N2E2_100	0.68	-0.4
144,980	-		Pf6N2E2_100	0.68	-0.3
144,980	-		Pf6N2E2_100	0.68	+0.5
144,980	-		Pf6N2E2_100	0.68	-0.8
144,985	+		Pf6N2E2_100	0.69	+0.7
144,985	+		Pf6N2E2_100	0.69	+1.7
144,986	-		Pf6N2E2_100	0.69	-1.4
144,986	-		Pf6N2E2_100	0.69	-0.7
144,986	-		Pf6N2E2_100	0.69	-0.8
144,986	-		Pf6N2E2_100	0.69	-0.3
144,986	-		Pf6N2E2_100	0.69	+0.7
145,000	+		Pf6N2E2_100	0.70	+0.5
145,001	-		Pf6N2E2_100	0.70	+1.3
145,079	-		Pf6N2E2_100	0.76	+0.1
145,079	-		Pf6N2E2_100	0.76	+0.8
145,136	-		Pf6N2E2_100	0.81	+0.2
145,352	-				-0.6
145,352	-				-0.3
145,391	+				-0.5
145,391	+				+0.7
145,391	+				+1.2
145,391	+				+0.0
145,391	+				+0.1
145,392	-				+0.8
145,392	-				+1.1
145,392	-				-0.7
145,392	-				-0.3
145,393	+				+1.1
145,393	+				-0.3
145,433	+				+1.1
145,434	-				-1.3
145,434	-				+1.2
145,436	+				+0.8
145,437	-				+0.1
145,437	-				+0.9
145,452	+				-0.1
145,452	+				+0.4
145,452	+				-1.2
145,452	+				+0.0
145,452	+				-0.5
145,452	+				+0.1
145,453	-				+0.3
145,453	-				-1.0
145,453	-				-0.4
145,453	-				+0.7
145,454	+				-0.1
145,454	+				-1.1
145,454	+				-0.5
145,454	+				+1.0
145,455	-				-0.3
145,455	-				+2.7
145,455	-				-1.4
145,460	+				+0.7
145,630	+		Pf6N2E2_101	0.27	-1.1
145,630	+		Pf6N2E2_101	0.27	-1.0
145,630	+		Pf6N2E2_101	0.27	+1.7
145,631	-		Pf6N2E2_101	0.27	-1.1
145,907	+		Pf6N2E2_101	0.81	-0.3
145,908	-		Pf6N2E2_101	0.81	-1.3
145,917	-		Pf6N2E2_101	0.83	-0.9
145,976	+				+0.5
145,976	+				+0.6
145,976	+				+0.0
145,976	+				+0.7
145,976	+				-0.4
145,977	-				+0.7
145,977	-				-1.0
145,977	-				+0.4
145,977	-				+0.5
145,977	-				+1.0
145,977	-				-1.4
146,004	-				-0.6
146,014	-				-0.6
146,027	+				-0.3
146,027	+				+0.2
146,028	-				+0.5
146,143	-				+0.3
146,143	-				-0.2
146,143	-				-0.6
146,268	+				+1.1
146,268	+				-0.1
146,268	+				+0.1
146,294	+				+0.8
146,294	+				-0.2
146,294	+				+1.7
146,298	+				+1.1
146,298	+				-0.7
146,298	+				-0.0
146,298	+				+0.4
146,298	+				+0.4
146,298	+				-0.8
146,342	+				+0.4
146,372	+				+0.0
146,372	+				-0.5
146,372	+				-0.6
146,372	+				-0.3
146,373	-				+0.3
146,373	-				+1.6
146,373	-				-0.9
146,647	+		Pf6N2E2_102	0.16	+0.8
146,647	+		Pf6N2E2_102	0.16	-0.8
146,647	+		Pf6N2E2_102	0.16	+0.1
146,648	-		Pf6N2E2_102	0.16	+0.2
146,774	+		Pf6N2E2_102	0.23	+1.7
146,775	-		Pf6N2E2_102	0.23	+0.6
146,777	+		Pf6N2E2_102	0.23	-0.5
146,777	+		Pf6N2E2_102	0.23	+0.8
146,778	-		Pf6N2E2_102	0.24	-1.6
146,778	-		Pf6N2E2_102	0.24	-1.2
146,887	+		Pf6N2E2_102	0.29	-0.1