Strain Fitness in Pantoea sp. MT58 around IAI47_04965

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
1,043,473	-				-2.2
1,043,473	-				+4.3
1,043,489	+				-2.4
1,043,490	-				-1.4
1,043,490	-				+3.9
1,043,558	+				+1.5
1,043,569	+				+1.7
1,043,570	-				-1.1
1,043,570	-				+2.0
1,043,591	-				+3.8
1,043,591	-				+0.5
1,043,591	-				+3.3
1,043,603	-				+1.5
1,043,639	+				-0.5
1,043,639	+				-2.5
1,043,639	+				-1.1
1,043,639	+				-0.7
1,043,648	+				+0.0
1,043,648	+				-1.0
1,043,649	-				-2.0
1,043,649	-				-0.5
1,043,649	-				-0.7
1,043,660	+				-1.3
1,043,669	+				-3.0
1,043,669	+				+1.4
1,043,669	+				+4.0
1,043,669	+				+0.9
1,043,669	+				+1.8
1,043,669	+				+2.3
1,043,669	+				-1.5
1,043,669	+				-2.4
1,043,669	+				+1.6
1,043,670	-				+0.0
1,043,670	-				+0.2
1,043,670	-				+0.1
1,043,670	-				+2.5
1,043,670	-				-1.9
1,043,893	+		IAI47_04965	0.25	-0.5
1,043,894	-		IAI47_04965	0.25	-1.0
1,043,894	-		IAI47_04965	0.25	+3.3
1,043,911	+		IAI47_04965	0.27	+1.8
1,043,912	-		IAI47_04965	0.27	-1.7
1,043,987	+		IAI47_04965	0.33	+0.8
1,043,987	+		IAI47_04965	0.33	-1.9
1,043,988	-		IAI47_04965	0.34	-2.8
1,044,109	+		IAI47_04965	0.44	-2.9
1,044,110	-		IAI47_04965	0.44	-1.5
1,044,110	-		IAI47_04965	0.44	+1.7
1,044,272	+		IAI47_04965	0.58	+0.9
1,044,272	+		IAI47_04965	0.58	+0.2
1,044,272	+		IAI47_04965	0.58	+0.5
1,044,273	-		IAI47_04965	0.58	-0.2
1,044,273	-		IAI47_04965	0.58	-0.2
1,044,275	+		IAI47_04965	0.58	+0.8
1,044,275	+		IAI47_04965	0.58	+2.9
1,044,276	-		IAI47_04965	0.59	+2.1
1,044,276	-		IAI47_04965	0.59	+0.8
1,044,276	-		IAI47_04965	0.59	-1.9
1,044,276	-		IAI47_04965	0.59	-1.7
1,044,289	+		IAI47_04965	0.60	+0.5
1,044,289	+		IAI47_04965	0.60	-0.7
1,044,289	+		IAI47_04965	0.60	+1.3
1,044,290	-		IAI47_04965	0.60	+3.5
1,044,312	-		IAI47_04965	0.62	-1.4
1,044,332	+		IAI47_04965	0.63	-2.8
1,044,332	+		IAI47_04965	0.63	+3.9
1,044,333	-		IAI47_04965	0.64	+2.5
1,044,333	-		IAI47_04965	0.64	-0.2
1,044,333	-		IAI47_04965	0.64	-0.2
1,044,333	-		IAI47_04965	0.64	-1.9
1,044,333	-		IAI47_04965	0.64	-1.4
1,044,634	-		IAI47_04965	0.90	-1.2
1,044,745	+				-1.5
1,044,746	-				+2.3
1,044,746	-				-1.2
1,044,746	-				-1.5
1,044,746	-				+2.7
1,044,750	-				+2.1
1,044,756	+				+1.2
1,044,757	-				+0.4
1,044,772	+				-2.1
1,044,773	-				+4.3
1,044,773	-				-1.0
1,044,812	+				+0.5
1,044,812	+				-0.2
1,044,813	-				-1.0
1,044,813	-				-1.8
1,044,813	-				-2.2
1,044,813	-				+2.3
1,044,899	+		IAI47_04970	0.13	+2.2
1,044,899	+		IAI47_04970	0.13	+0.1
1,044,899	+		IAI47_04970	0.13	-1.0
1,044,899	+		IAI47_04970	0.13	+0.7
1,044,899	+		IAI47_04970	0.13	-2.6
1,044,899	+		IAI47_04970	0.13	+1.3
1,044,900	-		IAI47_04970	0.13	+1.8
1,044,900	-		IAI47_04970	0.13	+3.1
1,044,900	-		IAI47_04970	0.13	+0.2
1,044,900	-		IAI47_04970	0.13	+0.1
1,044,903	+		IAI47_04970	0.13	+0.8
1,044,903	+		IAI47_04970	0.13	+0.4
1,044,903	+		IAI47_04970	0.13	-0.8
1,044,903	+		IAI47_04970	0.13	-2.4
1,044,903	+		IAI47_04970	0.13	-1.5
1,044,903	+		IAI47_04970	0.13	+1.8
1,044,903	+		IAI47_04970	0.13	+2.1
1,044,903	+		IAI47_04970	0.13	+0.5
1,044,903	+		IAI47_04970	0.13	-0.6
1,044,903	+		IAI47_04970	0.13	-1.7
1,044,904	-		IAI47_04970	0.13	+2.5
1,044,904	-		IAI47_04970	0.13	-3.0
1,044,904	-		IAI47_04970	0.13	-0.4
1,044,904	-		IAI47_04970	0.13	-2.2
1,044,904	-		IAI47_04970	0.13	-0.5
1,044,904	-		IAI47_04970	0.13	+1.6
1,044,904	-		IAI47_04970	0.13	+4.0
1,044,904	-		IAI47_04970	0.13	-1.6
1,044,904	-		IAI47_04970	0.13	-1.2
1,044,904	-		IAI47_04970	0.13	+2.1
1,044,904	-		IAI47_04970	0.13	+0.3
1,044,906	+		IAI47_04970	0.14	-3.2
1,044,906	+		IAI47_04970	0.14	+2.8
1,044,906	+		IAI47_04970	0.14	-0.5
1,044,906	+		IAI47_04970	0.14	+0.0
1,044,907	-		IAI47_04970	0.14	+1.5
1,044,907	-		IAI47_04970	0.14	-2.9
1,044,907	-		IAI47_04970	0.14	-0.4
1,044,907	-		IAI47_04970	0.14	+1.8
1,044,907	-		IAI47_04970	0.14	+1.8
1,044,907	-		IAI47_04970	0.14	+2.0
1,044,907	-		IAI47_04970	0.14	+0.0
1,044,907	-		IAI47_04970	0.14	+4.4
1,044,909	+		IAI47_04970	0.14	-1.8
1,044,910	-		IAI47_04970	0.14	-1.2
1,044,910	-		IAI47_04970	0.14	-0.4
1,044,910	-		IAI47_04970	0.14	-0.8
1,044,946	+		IAI47_04970	0.17	+0.7
1,044,946	+		IAI47_04970	0.17	+1.9
1,044,946	+		IAI47_04970	0.17	+1.8
1,044,946	+		IAI47_04970	0.17	+1.8
1,044,947	-		IAI47_04970	0.17	-2.2
1,044,947	-		IAI47_04970	0.17	-1.0
1,044,947	-		IAI47_04970	0.17	-0.6
1,044,947	-		IAI47_04970	0.17	-3.5
1,044,947	-		IAI47_04970	0.17	+0.3
1,044,947	-		IAI47_04970	0.17	-0.8
1,045,038	+		IAI47_04970	0.24	+2.5
1,045,039	-		IAI47_04970	0.24	+1.3
1,045,039	-		IAI47_04970	0.24	-1.1
1,045,045	-		IAI47_04970	0.25	+2.2
1,045,045	-		IAI47_04970	0.25	+1.8
1,045,048	+		IAI47_04970	0.25	+4.7
1,045,048	+		IAI47_04970	0.25	+0.9
1,045,048	+		IAI47_04970	0.25	+0.0
1,045,048	+		IAI47_04970	0.25	+1.2
1,045,069	-		IAI47_04970	0.26	-0.1
1,045,082	+		IAI47_04970	0.28	+0.2
1,045,082	+		IAI47_04970	0.28	+1.5
1,045,137	-		IAI47_04970	0.32	-1.7
1,045,164	+		IAI47_04970	0.34	-2.9
1,045,164	+		IAI47_04970	0.34	+1.2
1,045,164	+		IAI47_04970	0.34	-1.2
1,045,165	-		IAI47_04970	0.34	-0.0
1,045,165	-		IAI47_04970	0.34	+0.3
1,045,165	-		IAI47_04970	0.34	+2.4
1,045,165	-		IAI47_04970	0.34	+2.5
1,045,165	-		IAI47_04970	0.34	+0.9
1,045,257	+		IAI47_04970	0.41	-2.6
1,045,258	-		IAI47_04970	0.41	+3.3
1,045,353	+		IAI47_04970	0.49	-1.6
1,045,353	+		IAI47_04970	0.49	+1.7
1,045,353	+		IAI47_04970	0.49	+1.7
1,045,353	+		IAI47_04970	0.49	-1.0
1,045,353	+				+2.3
1,045,353	+		IAI47_04970	0.49	-1.6
1,045,353	+		IAI47_04970	0.49	+2.9
1,045,353	+		IAI47_04970	0.49	-2.1
1,045,353	+		IAI47_04970	0.49	-2.0
1,045,353	+		IAI47_04970	0.49	-0.2
1,045,353	+		IAI47_04970	0.49	-2.4
1,045,354	-		IAI47_04970	0.49	-0.7
1,045,354	-		IAI47_04970	0.49	+0.3
1,045,354	-		IAI47_04970	0.49	-1.6
1,045,354	-		IAI47_04970	0.49	+0.1
1,045,354	-		IAI47_04970	0.49	+1.4
1,045,354	-		IAI47_04970	0.49	+0.1
1,045,354	-		IAI47_04970	0.49	+1.3
1,045,354	-		IAI47_04970	0.49	+1.8
1,045,354	-		IAI47_04970	0.49	-0.8
1,045,357	+		IAI47_04970	0.49	+2.6
1,045,357	+		IAI47_04970	0.49	+1.0
1,045,357	+		IAI47_04970	0.49	-1.2
1,045,357	+		IAI47_04970	0.49	-1.8
1,045,357	+		IAI47_04970	0.49	-0.1
1,045,357	+		IAI47_04970	0.49	+0.1
1,045,357	+		IAI47_04970	0.49	-2.2
1,045,357	+		IAI47_04970	0.49	-1.1
1,045,358	-		IAI47_04970	0.49	+2.1
1,045,358	-		IAI47_04970	0.49	+0.0
1,045,358	-		IAI47_04970	0.49	-0.4
1,045,358	-		IAI47_04970	0.49	+2.5
1,045,358	-		IAI47_04970	0.49	+0.3
1,045,358	-		IAI47_04970	0.49	-1.1
1,045,358	-		IAI47_04970	0.49	+1.3
1,045,358	-		IAI47_04970	0.49	+1.8
1,045,358	-		IAI47_04970	0.49	+1.0
1,045,410	+		IAI47_04970	0.53	-2.2
1,045,410	+		IAI47_04970	0.53	-1.6
1,045,410	+		IAI47_04970	0.53	+0.0
1,045,411	-		IAI47_04970	0.53	-1.8
1,045,411	-		IAI47_04970	0.53	-2.6
1,045,411	-		IAI47_04970	0.53	+2.5
1,045,431	+		IAI47_04970	0.55	-1.3
1,045,433	+		IAI47_04970	0.55	+0.5
1,045,433	+		IAI47_04970	0.55	+2.3
1,045,433	+		IAI47_04970	0.55	-1.7
1,045,434	-		IAI47_04970	0.55	+1.5
1,045,434	-		IAI47_04970	0.55	+1.9
1,045,529	+		IAI47_04970	0.63	+2.6
1,045,529	+		IAI47_04970	0.63	-0.8
1,045,529	+		IAI47_04970	0.63	-2.0
1,045,529	+		IAI47_04970	0.63	-1.7
1,045,529	+		IAI47_04970	0.63	+0.1
1,045,530	-		IAI47_04970	0.63	+2.3
1,045,530	-		IAI47_04970	0.63	-1.8
1,045,530	-		IAI47_04970	0.63	+0.8
1,045,530	-		IAI47_04970	0.63	-1.0
1,045,530	-		IAI47_04970	0.63	+1.2
1,045,530	-		IAI47_04970	0.63	-0.7
1,045,530	-		IAI47_04970	0.63	+0.2
1,045,530	-		IAI47_04970	0.63	+2.1
1,045,530	-		IAI47_04970	0.63	-1.7
1,045,530	-		IAI47_04970	0.63	+1.8
1,045,530	-		IAI47_04970	0.63	-1.9
1,045,530	-		IAI47_04970	0.63	+1.3
1,045,540	+		IAI47_04970	0.64	+1.8
1,045,540	+		IAI47_04970	0.64	+0.8
1,045,540	+		IAI47_04970	0.64	+0.3
1,045,540	+		IAI47_04970	0.64	+1.0
1,045,540	+		IAI47_04970	0.64	+1.2
1,045,541	-		IAI47_04970	0.64	-2.1
1,045,541	-		IAI47_04970	0.64	+1.6
1,045,593	+		IAI47_04970	0.68	-0.8
1,045,593	+		IAI47_04970	0.68	+3.2
1,045,593	+		IAI47_04970	0.68	+0.6
1,045,593	+		IAI47_04970	0.68	-1.2
1,045,594	-		IAI47_04970	0.68	+0.5
1,045,594	-		IAI47_04970	0.68	+0.8
1,045,594	-		IAI47_04970	0.68	+1.6
1,045,615	+		IAI47_04970	0.70	-0.3
1,045,615	+		IAI47_04970	0.70	+0.0
1,045,615	+		IAI47_04970	0.70	-0.2
1,045,734	+		IAI47_04970	0.79	+1.0
1,045,734	+		IAI47_04970	0.79	+0.4
1,045,734	+		IAI47_04970	0.79	-0.8
1,045,734	+		IAI47_04970	0.79	-0.2
1,045,735	-		IAI47_04970	0.79	+2.6
1,045,735	-		IAI47_04970	0.79	+0.3