Experiment: No vitamins t1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02615 and HSERO_RS02620 are separated by 251 nucleotides HSERO_RS02620 and HSERO_RS02625 are separated by 292 nucleotides
HSERO_RS02615: HSERO_RS02615 - polymerase, at 571,913 to 573,550
_RS02615
HSERO_RS02620: HSERO_RS02620 - cobalt transporter, at 573,802 to 574,719
_RS02620
HSERO_RS02625: HSERO_RS02625 - hypothetical protein, at 575,012 to 576,406
_RS02625
Position (kb) 573
574
575 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 572.810 kb on + strand, within HSERO_RS02615 at 572.833 kb on + strand, within HSERO_RS02615 at 572.833 kb on + strand, within HSERO_RS02615 at 572.911 kb on - strand, within HSERO_RS02615 at 572.911 kb on - strand, within HSERO_RS02615 at 573.332 kb on - strand, within HSERO_RS02615 at 573.475 kb on - strand at 573.657 kb on + strand at 573.777 kb on + strand at 573.778 kb on + strand at 573.832 kb on - strand at 573.935 kb on - strand, within HSERO_RS02620 at 574.017 kb on - strand, within HSERO_RS02620 at 574.027 kb on - strand, within HSERO_RS02620 at 574.037 kb on - strand, within HSERO_RS02620 at 574.106 kb on - strand, within HSERO_RS02620 at 574.195 kb on + strand, within HSERO_RS02620 at 574.286 kb on - strand, within HSERO_RS02620 at 574.363 kb on - strand, within HSERO_RS02620 at 574.678 kb on + strand at 574.784 kb on + strand at 574.833 kb on + strand at 574.985 kb on - strand at 575.066 kb on - strand at 575.116 kb on + strand at 575.124 kb on - strand at 575.140 kb on - strand at 575.158 kb on - strand, within HSERO_RS02625 at 575.298 kb on + strand, within HSERO_RS02625 at 575.305 kb on + strand, within HSERO_RS02625
Per-strain Table
Position Strand Gene LocusTag Fraction No vitamins t1 remove 572,810 + HSERO_RS02615 0.55 -0.2 572,833 + HSERO_RS02615 0.56 -0.4 572,833 + HSERO_RS02615 0.56 -2.8 572,911 - HSERO_RS02615 0.61 +0.4 572,911 - HSERO_RS02615 0.61 -2.1 573,332 - HSERO_RS02615 0.87 +0.4 573,475 - -0.4 573,657 + +0.3 573,777 + +0.7 573,778 + -0.0 573,832 - -0.4 573,935 - HSERO_RS02620 0.14 +0.3 574,017 - HSERO_RS02620 0.23 +0.2 574,027 - HSERO_RS02620 0.25 -0.1 574,037 - HSERO_RS02620 0.26 -0.8 574,106 - HSERO_RS02620 0.33 +0.1 574,195 + HSERO_RS02620 0.43 +0.2 574,286 - HSERO_RS02620 0.53 +0.0 574,363 - HSERO_RS02620 0.61 +0.0 574,678 + +0.6 574,784 + -1.4 574,833 + +0.0 574,985 - +0.4 575,066 - +0.6 575,116 + +0.1 575,124 - +0.6 575,140 - +1.4 575,158 - HSERO_RS02625 0.10 -0.4 575,298 + HSERO_RS02625 0.21 -0.4 575,305 + HSERO_RS02625 0.21 -0.4
Or see this region's nucleotide sequence