Experiment: LB_0.5%bileacids_aerobic_180MIN_ZN15A
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CSW01_16705 and CSW01_16710 are separated by 135 nucleotides CSW01_16710 and CSW01_16715 are separated by 43 nucleotides CSW01_16715 and CSW01_16720 are separated by 63 nucleotides CSW01_16720 and CSW01_16725 are separated by 174 nucleotides
CSW01_16705: CSW01_16705 - hypothetical protein, at 425,663 to 426,052
_16705
CSW01_16710: CSW01_16710 - acetyltransferase, at 426,188 to 426,472
_16710
CSW01_16715: CSW01_16715 - IS200/IS605 family transposase, at 426,516 to 426,953
_16715
CSW01_16720: CSW01_16720 - GNAT family N-acetyltransferase, at 427,017 to 427,235
_16720
CSW01_16725: CSW01_16725 - DUF3800 domain-containing protein, at 427,410 to 428,282
_16725
Position (kb) 427
428 Strain fitness (log2 ratio) -1
0
1 at 426.181 kb on - strand at 427.232 kb on - strand at 427.250 kb on - strand at 427.250 kb on - strand at 427.533 kb on - strand, within CSW01_16725 at 427.603 kb on - strand, within CSW01_16725 at 427.628 kb on + strand, within CSW01_16725 at 427.679 kb on + strand, within CSW01_16725 at 427.713 kb on + strand, within CSW01_16725 at 427.713 kb on + strand, within CSW01_16725 at 427.721 kb on - strand, within CSW01_16725 at 427.721 kb on - strand, within CSW01_16725 at 427.875 kb on + strand, within CSW01_16725 at 427.875 kb on + strand, within CSW01_16725 at 427.875 kb on + strand, within CSW01_16725 at 427.875 kb on + strand, within CSW01_16725 at 427.883 kb on - strand, within CSW01_16725 at 427.883 kb on - strand, within CSW01_16725 at 427.895 kb on + strand, within CSW01_16725 at 427.895 kb on - strand, within CSW01_16725 at 427.895 kb on - strand, within CSW01_16725 at 427.902 kb on + strand, within CSW01_16725 at 427.956 kb on + strand, within CSW01_16725
Per-strain Table
Position Strand Gene LocusTag Fraction LB_0.5%bileacids_aerobic_180MIN_ZN15A remove 426,181 - -0.9 427,232 - +0.3 427,250 - -0.2 427,250 - -0.6 427,533 - CSW01_16725 0.14 +0.6 427,603 - CSW01_16725 0.22 -0.4 427,628 + CSW01_16725 0.25 +0.2 427,679 + CSW01_16725 0.31 -0.8 427,713 + CSW01_16725 0.35 -0.9 427,713 + CSW01_16725 0.35 -0.5 427,721 - CSW01_16725 0.36 +0.5 427,721 - CSW01_16725 0.36 +0.2 427,875 + CSW01_16725 0.53 +0.6 427,875 + CSW01_16725 0.53 +0.1 427,875 + CSW01_16725 0.53 +0.6 427,875 + CSW01_16725 0.53 -1.4 427,883 - CSW01_16725 0.54 -0.1 427,883 - CSW01_16725 0.54 +0.3 427,895 + CSW01_16725 0.56 -0.6 427,895 - CSW01_16725 0.56 +0.4 427,895 - CSW01_16725 0.56 -0.7 427,902 + CSW01_16725 0.56 -0.9 427,956 + CSW01_16725 0.63 +0.9
Or see this region's nucleotide sequence