Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_09865

Experiment: LB_0.5%bileacids_aerobic_180MIN_ZN15A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB_0.5%bileacids_aerobic_180MIN_ZN15A
2,125,495	+		CSW01_09860	0.42	+0.1
2,125,523	+		CSW01_09860	0.43	+0.5
2,125,523	+		CSW01_09860	0.43	+1.3
2,125,523	+		CSW01_09860	0.43	-0.1
2,125,525	-		CSW01_09860	0.43	+1.0
2,125,531	-		CSW01_09860	0.44	+1.3
2,125,531	-		CSW01_09860	0.44	+1.0
2,125,531	-		CSW01_09860	0.44	-0.0
2,125,548	-		CSW01_09860	0.45	-0.3
2,125,558	-		CSW01_09860	0.45	-0.9
2,125,558	-		CSW01_09860	0.45	-0.1
2,125,587	+		CSW01_09860	0.47	-0.1
2,125,652	+		CSW01_09860	0.51	-0.6
2,125,740	+		CSW01_09860	0.56	+0.4
2,125,828	-		CSW01_09860	0.61	+0.4
2,125,834	+		CSW01_09860	0.61	-1.2
2,125,834	+		CSW01_09860	0.61	+0.5
2,125,863	-		CSW01_09860	0.63	-0.5
2,125,868	-		CSW01_09860	0.63	+0.1
2,125,904	+		CSW01_09860	0.65	-0.7
2,125,958	+		CSW01_09860	0.69	-1.2
2,125,990	-		CSW01_09860	0.70	+0.1
2,126,011	+		CSW01_09860	0.72	-0.4
2,126,013	-		CSW01_09860	0.72	+1.1
2,126,075	+		CSW01_09860	0.75	+0.5
2,126,075	+		CSW01_09860	0.75	-1.9
2,126,075	+		CSW01_09860	0.75	+0.1
2,126,075	+		CSW01_09860	0.75	+0.1
2,126,083	-		CSW01_09860	0.76	+0.0
2,126,158	-		CSW01_09860	0.80	-1.2
2,126,172	+		CSW01_09860	0.81	+0.1
2,126,236	-		CSW01_09860	0.85	+0.2
2,126,321	-		CSW01_09860	0.90	-0.1
2,126,321	-		CSW01_09860	0.90	-0.5
2,126,321	-		CSW01_09860	0.90	-0.5
2,126,321	-		CSW01_09860	0.90	-0.7
2,126,378	-				-0.0
2,126,378	-				-0.7
2,126,403	+				+0.2
2,126,413	+				+0.2
2,126,424	+				-1.1
2,126,434	+				-0.4
2,126,434	+				-0.4
2,126,442	-				-0.9
2,126,543	-				-0.8
2,126,601	+				-0.7
2,126,616	+				+0.5
2,126,616	+				-0.5
2,126,624	-		CSW01_09865	0.10	+1.1
2,126,771	-		CSW01_09865	0.21	-0.2
2,126,772	-		CSW01_09865	0.21	-0.6
2,126,788	+		CSW01_09865	0.23	+0.3
2,126,789	+		CSW01_09865	0.23	-0.0
2,126,795	-		CSW01_09865	0.23	+0.0
2,126,818	-		CSW01_09865	0.25	+0.4
2,126,827	+		CSW01_09865	0.26	+0.5
2,126,827	+		CSW01_09865	0.26	-0.3
2,126,827	+		CSW01_09865	0.26	+0.3
2,126,827	+		CSW01_09865	0.26	+0.1
2,126,827	+		CSW01_09865	0.26	+2.1
2,126,827	+		CSW01_09865	0.26	+0.1
2,126,835	-		CSW01_09865	0.26	-0.1
2,126,835	-		CSW01_09865	0.26	-0.8
2,126,900	+		CSW01_09865	0.31	+1.1
2,126,902	+		CSW01_09865	0.31	+0.7
2,126,902	+		CSW01_09865	0.31	+0.7
2,126,907	+		CSW01_09865	0.32	-1.9
2,126,907	+		CSW01_09865	0.32	+0.1
2,126,910	-		CSW01_09865	0.32	+0.1
2,126,910	-		CSW01_09865	0.32	-2.5
2,126,915	-		CSW01_09865	0.32	+0.8
2,126,972	+		CSW01_09865	0.37	+0.6
2,127,005	+		CSW01_09865	0.39	+0.2
2,127,005	+		CSW01_09865	0.39	+0.5
2,127,093	-		CSW01_09865	0.46	+1.1
2,127,095	+		CSW01_09865	0.46	+0.2
2,127,110	+		CSW01_09865	0.47	+0.6
2,127,110	+		CSW01_09865	0.47	-2.2
2,127,110	+		CSW01_09865	0.47	+0.3
2,127,125	-		CSW01_09865	0.48	+0.0
2,127,146	+		CSW01_09865	0.50	+0.2
2,127,161	-		CSW01_09865	0.51	-1.5
2,127,186	-		CSW01_09865	0.53	+0.3
2,127,186	-		CSW01_09865	0.53	-0.1
2,127,196	+		CSW01_09865	0.54	+0.5
2,127,196	+		CSW01_09865	0.54	+1.4
2,127,265	-		CSW01_09865	0.59	-0.0
2,127,365	-		CSW01_09865	0.67	+0.7
2,127,433	+		CSW01_09865	0.72	-0.3
2,127,461	+		CSW01_09865	0.74	+0.3
2,127,521	+		CSW01_09865	0.79	+2.3
2,127,521	+		CSW01_09865	0.79	-0.5
2,127,524	-		CSW01_09865	0.79	-0.3
2,127,529	-		CSW01_09865	0.79	+0.9
2,127,529	-		CSW01_09865	0.79	-0.6
2,127,529	-		CSW01_09865	0.79	+0.2
2,127,532	+		CSW01_09865	0.79	+0.2
2,127,537	+		CSW01_09865	0.80	-1.5
2,127,546	-		CSW01_09865	0.81	-0.6
2,127,546	-		CSW01_09865	0.81	+0.4
2,127,595	+		CSW01_09865	0.84	-0.2
2,127,595	+		CSW01_09865	0.84	-0.5
2,127,595	+		CSW01_09865	0.84	+0.5
2,127,595	+		CSW01_09865	0.84	+0.5
2,127,602	-		CSW01_09865	0.85	-0.2
2,127,603	-		CSW01_09865	0.85	+0.3
2,127,603	-		CSW01_09865	0.85	-0.5
2,127,603	-		CSW01_09865	0.85	+0.3
2,127,603	-		CSW01_09865	0.85	+0.1
2,127,697	+				-0.3
2,127,730	-				+0.1
2,127,751	+				+0.7
2,127,759	-				+0.1
2,127,768	+				-1.7
2,127,905	-				+0.2
2,128,110	+				+0.1
2,128,125	+				+0.5
2,128,168	+		CSW01_09870	0.13	+1.8
2,128,205	-		CSW01_09870	0.16	+0.6
2,128,212	+		CSW01_09870	0.16	+0.7
2,128,212	+		CSW01_09870	0.16	-0.0
2,128,212	+		CSW01_09870	0.16	+0.6
2,128,220	-		CSW01_09870	0.17	+0.2
2,128,266	-		CSW01_09870	0.21	+0.7
2,128,303	+		CSW01_09870	0.24	+0.7
2,128,311	-		CSW01_09870	0.24	+1.8
2,128,325	+		CSW01_09870	0.26	-0.1
2,128,325	+		CSW01_09870	0.26	-0.5
2,128,325	+		CSW01_09870	0.26	+0.0
2,128,330	-		CSW01_09870	0.26	+0.1
2,128,333	-		CSW01_09870	0.26	-0.1
2,128,359	+		CSW01_09870	0.28	-0.1
2,128,403	-		CSW01_09870	0.32	+0.7
2,128,418	+		CSW01_09870	0.33	-0.6
2,128,426	-		CSW01_09870	0.34	-0.0
2,128,455	-		CSW01_09870	0.36	+1.0
2,128,526	+		CSW01_09870	0.42	+0.2
2,128,531	+		CSW01_09870	0.42	+0.7
2,128,536	+		CSW01_09870	0.43	+1.5
2,128,539	-		CSW01_09870	0.43	+1.2
2,128,656	+		CSW01_09870	0.53	+0.7
2,128,659	-		CSW01_09870	0.53	-0.1
2,128,669	+		CSW01_09870	0.54	-0.4
2,128,669	+		CSW01_09870	0.54	+0.5
2,128,669	+		CSW01_09870	0.54	+0.2
2,128,677	-		CSW01_09870	0.54	-0.7
2,128,677	-		CSW01_09870	0.54	-0.4
2,128,677	-		CSW01_09870	0.54	+0.5
2,128,677	-		CSW01_09870	0.54	-0.2
2,128,677	-		CSW01_09870	0.54	-0.0
2,128,677	-		CSW01_09870	0.54	+0.8
2,128,728	+		CSW01_09870	0.59	-1.5
2,128,736	-		CSW01_09870	0.59	-0.8
2,128,742	-		CSW01_09870	0.60	+0.0
2,128,781	+		CSW01_09870	0.63	+0.2