Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_04880

Experiment: LB_0.5%bileacids_aerobic_180MIN_ZN15A

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCSW01_04875 and CSW01_04880 are separated by 5 nucleotidesCSW01_04880 and CSW01_04885 are separated by 176 nucleotides CSW01_04875: CSW01_04875 - DNA polymerase III subunit delta, at 1,015,736 to 1,016,764 _04875 CSW01_04880: CSW01_04880 - luciferase, at 1,016,770 to 1,017,384 _04880 CSW01_04885: CSW01_04885 - leucine--tRNA ligase, at 1,017,561 to 1,020,137 _04885 Position (kb) 1016 1017 1018Strain fitness (log2 ratio) -1 0 1at 1015.772 kb on - strandat 1017.534 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_0.5%bileacids_aerobic_180MIN_ZN15A
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1,015,772 - -0.8
1,017,534 - -0.1

Or see this region's nucleotide sequence