Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20740 and AO356_20745 are separated by 47 nucleotides AO356_20745 and AO356_20750 are separated by 47 nucleotides
AO356_20740: AO356_20740 - cell wall assembly protein, at 4,623,384 to 4,624,007
_20740
AO356_20745: AO356_20745 - hypothetical protein, at 4,624,055 to 4,624,741
_20745
AO356_20750: AO356_20750 - hypothetical protein, at 4,624,789 to 4,625,178
_20750
Position (kb)
4624
4625
4626 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4623.804 kb on + strand, within AO356_20740 at 4623.804 kb on + strand, within AO356_20740 at 4623.804 kb on + strand, within AO356_20740 at 4623.804 kb on + strand, within AO356_20740 at 4623.804 kb on + strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.805 kb on - strand, within AO356_20740 at 4623.834 kb on + strand, within AO356_20740 at 4623.835 kb on - strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.849 kb on + strand, within AO356_20740 at 4623.850 kb on - strand, within AO356_20740 at 4623.854 kb on - strand, within AO356_20740 at 4623.878 kb on + strand, within AO356_20740 at 4623.878 kb on + strand, within AO356_20740 at 4623.878 kb on + strand, within AO356_20740 at 4623.878 kb on + strand, within AO356_20740 at 4623.879 kb on - strand, within AO356_20740 at 4624.119 kb on + strand at 4624.120 kb on - strand at 4624.132 kb on + strand, within AO356_20745 at 4624.134 kb on + strand, within AO356_20745 at 4624.134 kb on + strand, within AO356_20745 at 4624.135 kb on - strand, within AO356_20745 at 4624.135 kb on - strand, within AO356_20745 at 4624.135 kb on - strand, within AO356_20745 at 4624.135 kb on - strand, within AO356_20745 at 4624.135 kb on - strand, within AO356_20745 at 4624.188 kb on + strand, within AO356_20745 at 4624.212 kb on + strand, within AO356_20745 at 4624.236 kb on + strand, within AO356_20745 at 4624.236 kb on + strand, within AO356_20745 at 4624.350 kb on + strand, within AO356_20745 at 4624.350 kb on + strand, within AO356_20745 at 4624.449 kb on + strand, within AO356_20745 at 4624.449 kb on + strand, within AO356_20745 at 4624.449 kb on + strand, within AO356_20745 at 4624.449 kb on + strand, within AO356_20745 at 4624.449 kb on + strand, within AO356_20745 at 4624.449 kb on + strand, within AO356_20745 at 4624.561 kb on - strand, within AO356_20745 at 4624.561 kb on - strand, within AO356_20745 at 4624.602 kb on + strand, within AO356_20745 at 4624.602 kb on + strand, within AO356_20745 at 4624.603 kb on - strand, within AO356_20745 at 4624.603 kb on - strand, within AO356_20745 at 4624.603 kb on - strand, within AO356_20745 at 4624.603 kb on - strand, within AO356_20745 at 4624.603 kb on - strand, within AO356_20745 at 4624.603 kb on - strand, within AO356_20745 at 4624.846 kb on + strand, within AO356_20750 at 4624.846 kb on + strand, within AO356_20750 at 4624.846 kb on + strand, within AO356_20750 at 4624.846 kb on + strand, within AO356_20750 at 4624.846 kb on + strand, within AO356_20750 at 4624.847 kb on - strand, within AO356_20750 at 4624.847 kb on - strand, within AO356_20750 at 4624.847 kb on - strand, within AO356_20750 at 4624.847 kb on - strand, within AO356_20750 at 4624.847 kb on - strand, within AO356_20750 at 4624.847 kb on - strand, within AO356_20750 at 4624.874 kb on - strand, within AO356_20750 at 4624.886 kb on + strand, within AO356_20750 at 4624.887 kb on - strand, within AO356_20750 at 4624.950 kb on - strand, within AO356_20750 at 4624.950 kb on - strand, within AO356_20750 at 4624.976 kb on - strand, within AO356_20750 at 4625.149 kb on + strand at 4625.149 kb on + strand at 4625.150 kb on - strand at 4625.150 kb on - strand at 4625.150 kb on - strand at 4625.150 kb on - strand at 4625.150 kb on - strand at 4625.155 kb on + strand at 4625.155 kb on + strand at 4625.156 kb on - strand at 4625.156 kb on - strand at 4625.156 kb on - strand at 4625.174 kb on + strand at 4625.174 kb on + strand at 4625.174 kb on + strand at 4625.175 kb on - strand at 4625.175 kb on - strand at 4625.208 kb on + strand at 4625.213 kb on + strand at 4625.214 kb on - strand at 4625.214 kb on - strand at 4625.217 kb on + strand at 4625.218 kb on - strand at 4625.245 kb on + strand at 4625.246 kb on - strand at 4625.246 kb on - strand at 4625.296 kb on + strand at 4625.297 kb on - strand at 4625.297 kb on - strand at 4625.297 kb on - strand at 4625.338 kb on + strand at 4625.338 kb on + strand at 4625.338 kb on + strand at 4625.374 kb on + strand at 4625.375 kb on - strand at 4625.465 kb on - strand at 4625.474 kb on + strand at 4625.474 kb on + strand at 4625.475 kb on - strand at 4625.496 kb on + strand at 4625.497 kb on - strand at 4625.497 kb on - strand at 4625.497 kb on - strand at 4625.607 kb on - strand at 4625.623 kb on - strand at 4625.632 kb on - strand at 4625.686 kb on + strand at 4625.686 kb on + strand at 4625.687 kb on - strand at 4625.697 kb on + strand at 4625.697 kb on + strand at 4625.697 kb on + strand at 4625.698 kb on - strand at 4625.698 kb on - strand at 4625.698 kb on - strand at 4625.726 kb on + strand at 4625.726 kb on + strand at 4625.726 kb on + strand at 4625.727 kb on - strand at 4625.727 kb on - strand at 4625.847 kb on + strand at 4625.847 kb on + strand at 4625.852 kb on + strand at 4625.852 kb on + strand at 4625.853 kb on - strand at 4625.904 kb on + strand at 4625.906 kb on + strand at 4625.922 kb on - strand at 4625.922 kb on - strand at 4625.988 kb on + strand at 4625.988 kb on + strand at 4625.988 kb on + strand at 4625.988 kb on + strand at 4625.989 kb on - strand at 4625.989 kb on - strand at 4625.989 kb on - strand at 4625.989 kb on - strand at 4626.002 kb on + strand at 4626.003 kb on - strand at 4626.008 kb on + strand at 4626.108 kb on - strand at 4626.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 4,623,804 + AO356_20740 0.67 +0.5 4,623,804 + AO356_20740 0.67 -0.9 4,623,804 + AO356_20740 0.67 +0.1 4,623,804 + AO356_20740 0.67 +0.5 4,623,804 + AO356_20740 0.67 -0.5 4,623,805 - AO356_20740 0.67 -1.1 4,623,805 - AO356_20740 0.67 +0.8 4,623,805 - AO356_20740 0.67 +1.1 4,623,805 - AO356_20740 0.67 +0.7 4,623,805 - AO356_20740 0.67 +0.4 4,623,805 - AO356_20740 0.67 -1.6 4,623,805 - AO356_20740 0.67 +0.3 4,623,834 + AO356_20740 0.72 +0.4 4,623,835 - AO356_20740 0.72 -0.4 4,623,849 + AO356_20740 0.75 +0.6 4,623,849 + AO356_20740 0.75 -0.3 4,623,849 + AO356_20740 0.75 +0.5 4,623,849 + AO356_20740 0.75 -0.1 4,623,849 + AO356_20740 0.75 +0.3 4,623,849 + AO356_20740 0.75 -0.6 4,623,849 + AO356_20740 0.75 +1.3 4,623,849 + AO356_20740 0.75 +0.3 4,623,850 - AO356_20740 0.75 -0.3 4,623,854 - AO356_20740 0.75 -1.2 4,623,878 + AO356_20740 0.79 +0.3 4,623,878 + AO356_20740 0.79 -0.2 4,623,878 + AO356_20740 0.79 +0.4 4,623,878 + AO356_20740 0.79 -0.2 4,623,879 - AO356_20740 0.79 +0.4 4,624,119 + -0.3 4,624,120 - +0.7 4,624,132 + AO356_20745 0.11 -0.2 4,624,134 + AO356_20745 0.11 +2.4 4,624,134 + AO356_20745 0.11 +1.0 4,624,135 - AO356_20745 0.12 +1.3 4,624,135 - AO356_20745 0.12 +0.2 4,624,135 - AO356_20745 0.12 -0.5 4,624,135 - AO356_20745 0.12 -0.2 4,624,135 - AO356_20745 0.12 -0.3 4,624,188 + AO356_20745 0.19 -1.0 4,624,212 + AO356_20745 0.23 +1.7 4,624,236 + AO356_20745 0.26 -0.1 4,624,236 + AO356_20745 0.26 +0.4 4,624,350 + AO356_20745 0.43 +1.2 4,624,350 + AO356_20745 0.43 -0.1 4,624,449 + AO356_20745 0.57 -0.2 4,624,449 + AO356_20745 0.57 +0.1 4,624,449 + AO356_20745 0.57 +0.3 4,624,449 + AO356_20745 0.57 +1.9 4,624,449 + AO356_20745 0.57 +0.6 4,624,449 + AO356_20745 0.57 +0.9 4,624,561 - AO356_20745 0.74 -0.2 4,624,561 - AO356_20745 0.74 -0.8 4,624,602 + AO356_20745 0.80 +0.7 4,624,602 + AO356_20745 0.80 +1.0 4,624,603 - AO356_20745 0.80 +0.4 4,624,603 - AO356_20745 0.80 -0.9 4,624,603 - AO356_20745 0.80 +1.2 4,624,603 - AO356_20745 0.80 -0.4 4,624,603 - AO356_20745 0.80 +1.0 4,624,603 - AO356_20745 0.80 +1.8 4,624,846 + AO356_20750 0.15 -0.4 4,624,846 + AO356_20750 0.15 +0.9 4,624,846 + AO356_20750 0.15 +0.5 4,624,846 + AO356_20750 0.15 +1.2 4,624,846 + AO356_20750 0.15 +0.3 4,624,847 - AO356_20750 0.15 +1.2 4,624,847 - AO356_20750 0.15 +0.3 4,624,847 - AO356_20750 0.15 +1.4 4,624,847 - AO356_20750 0.15 +0.6 4,624,847 - AO356_20750 0.15 -1.1 4,624,847 - AO356_20750 0.15 +0.4 4,624,874 - AO356_20750 0.22 +1.1 4,624,886 + AO356_20750 0.25 -0.3 4,624,887 - AO356_20750 0.25 -0.5 4,624,950 - AO356_20750 0.41 +0.4 4,624,950 - AO356_20750 0.41 +0.1 4,624,976 - AO356_20750 0.48 +0.8 4,625,149 + +1.0 4,625,149 + -0.1 4,625,150 - -0.8 4,625,150 - +0.0 4,625,150 - +0.2 4,625,150 - +0.2 4,625,150 - -0.8 4,625,155 + +0.5 4,625,155 + -0.5 4,625,156 - -1.8 4,625,156 - -0.4 4,625,156 - +0.9 4,625,174 + +0.9 4,625,174 + +0.0 4,625,174 + +0.2 4,625,175 - +0.2 4,625,175 - +0.6 4,625,208 + +0.7 4,625,213 + +0.0 4,625,214 - +1.7 4,625,214 - +0.2 4,625,217 + +0.1 4,625,218 - +0.5 4,625,245 + +0.2 4,625,246 - +0.2 4,625,246 - +0.2 4,625,296 + -0.6 4,625,297 - +0.4 4,625,297 - +0.7 4,625,297 - +0.2 4,625,338 + -0.3 4,625,338 + -1.8 4,625,338 + +0.3 4,625,374 + -0.8 4,625,375 - +0.6 4,625,465 - +1.3 4,625,474 + +0.4 4,625,474 + -0.8 4,625,475 - -0.1 4,625,496 + +0.3 4,625,497 - -0.1 4,625,497 - +0.2 4,625,497 - +0.0 4,625,607 - +0.5 4,625,623 - -0.1 4,625,632 - -0.2 4,625,686 + +0.4 4,625,686 + +0.3 4,625,687 - -0.6 4,625,697 + -0.5 4,625,697 + +0.3 4,625,697 + -0.4 4,625,698 - +0.6 4,625,698 - +0.2 4,625,698 - +0.6 4,625,726 + +0.3 4,625,726 + -0.7 4,625,726 + -1.0 4,625,727 - +0.8 4,625,727 - -0.4 4,625,847 + -1.2 4,625,847 + +0.4 4,625,852 + -0.3 4,625,852 + -0.5 4,625,853 - -1.0 4,625,904 + +0.1 4,625,906 + -0.3 4,625,922 - -0.8 4,625,922 - +0.6 4,625,988 + +0.0 4,625,988 + +0.1 4,625,988 + -1.3 4,625,988 + +0.2 4,625,989 - +0.4 4,625,989 - -0.3 4,625,989 - +0.6 4,625,989 - -1.6 4,626,002 + +0.4 4,626,003 - +0.1 4,626,008 + +0.5 4,626,108 - -0.8 4,626,176 - +0.3
Or see this region's nucleotide sequence