Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1478
Experiment: MoYLS4 with Nitrite 0.025mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nitrite 0.025mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,557,039 | + | +0.4 | |||
| 1,557,047 | - | +0.3 | |||
| 1,557,067 | - | +0.4 | |||
| 1,557,146 | + | +0.7 | |||
| 1,557,225 | + | DVU1477 | 0.19 | +0.3 | |
| 1,557,226 | - | DVU1477 | 0.19 | +0.0 | |
| 1,557,230 | + | DVU1477 | 0.20 | -0.4 | |
| 1,557,231 | - | DVU1477 | 0.20 | +0.1 | |
| 1,557,319 | + | DVU1477 | 0.34 | -0.3 | |
| 1,557,335 | - | DVU1477 | 0.36 | -0.9 | |
| 1,557,421 | + | DVU1477 | 0.50 | -1.3 | |
| 1,557,446 | - | DVU1477 | 0.54 | +1.3 | |
| 1,557,556 | + | DVU1477 | 0.72 | -0.3 | |
| 1,557,557 | + | DVU1477 | 0.72 | -0.2 | |
| 1,557,631 | - | DVU1477 | 0.84 | +0.3 | |
| 1,557,666 | + | DVU1477 | 0.89 | +0.3 | |
| 1,557,669 | + | DVU1477 | 0.90 | +0.3 | |
| 1,557,757 | - | +1.3 | |||
| 1,557,790 | - | +0.5 | |||
| 1,557,790 | - | -0.5 | |||
| 1,558,480 | + | DVU1478 | 0.72 | -0.7 | |
| 1,558,641 | + | +2.9 | |||
| 1,559,070 | + | DVU1479 | 0.40 | -2.4 | |
| 1,559,144 | - | DVU1479 | 0.48 | -1.3 |
Or see this region's nucleotide sequence