Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1762
Experiment: MoYLS4 with Nitrite 0.025mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nitrite 0.025mg/mL |
---|---|---|---|---|---|
remove | |||||
1,824,922 | - | -0.4 | |||
1,824,987 | + | -0.1 | |||
1,825,017 | + | DVU1760 | 0.11 | -1.9 | |
1,825,017 | + | DVU1760 | 0.11 | -1.4 | |
1,825,321 | + | DVU1760 | 0.63 | -0.1 | |
1,825,475 | - | DVU1760 | 0.89 | -0.1 | |
1,825,760 | + | -0.1 | |||
1,825,845 | - | DVU1762 | 0.13 | +0.4 | |
1,825,902 | + | DVU1762 | 0.25 | +0.3 | |
1,825,951 | + | DVU1762 | 0.36 | -0.7 | |
1,825,959 | - | DVU1762 | 0.38 | -0.5 | |
1,825,959 | - | DVU1762 | 0.38 | +0.2 | |
1,826,132 | - | DVU1762 | 0.75 | -0.1 | |
1,826,396 | - | +0.3 | |||
1,826,420 | + | -0.5 | |||
1,826,420 | + | -0.1 | |||
1,826,428 | - | -0.9 | |||
1,826,442 | + | +0.3 | |||
1,826,450 | - | -0.0 | |||
1,826,451 | - | -0.7 | |||
1,826,451 | - | +0.4 | |||
1,826,451 | - | +0.3 | |||
1,826,504 | - | +0.2 | |||
1,826,672 | - | +0.0 | |||
1,826,730 | + | -1.3 | |||
1,826,730 | + | -0.6 | |||
1,826,814 | + | -1.1 | |||
1,826,814 | + | +0.5 | |||
1,826,814 | + | -0.3 | |||
1,826,814 | + | +0.2 | |||
1,826,822 | - | +1.8 | |||
1,826,859 | + | -1.1 | |||
1,826,867 | - | +0.6 | |||
1,826,889 | - | -0.0 | |||
1,826,926 | + | -1.7 | |||
1,826,950 | - | -0.1 | |||
1,826,973 | - | -0.0 | |||
1,826,978 | - | +0.3 | |||
1,827,014 | + | -0.1 | |||
1,827,022 | - | -0.0 | |||
1,827,060 | - | -0.2 | |||
1,827,097 | + | DVU1764 | 0.22 | +0.2 | |
1,827,156 | + | DVU1764 | 0.44 | -0.1 | |
1,827,164 | - | DVU1764 | 0.47 | -0.2 |
Or see this region's nucleotide sequence