Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3913

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,022,752	+		Ga0059261_3911	0.38	+1.1
4,022,752	+		Ga0059261_3911	0.38	+1.5
4,022,752	+		Ga0059261_3911	0.38	+0.8
4,022,752	+		Ga0059261_3911	0.38	+1.3
4,022,752	+		Ga0059261_3911	0.38	-0.9
4,022,752	+		Ga0059261_3911	0.38	-0.8
4,022,753	-		Ga0059261_3911	0.38	+0.3
4,022,753	-				+1.2
4,022,753	-		Ga0059261_3911	0.38	-0.2
4,022,762	+		Ga0059261_3911	0.40	-0.5
4,022,762	+		Ga0059261_3911	0.40	-1.2
4,022,763	-		Ga0059261_3911	0.40	+0.0
4,022,763	-		Ga0059261_3911	0.40	-1.7
4,022,763	-		Ga0059261_3911	0.40	-0.9
4,022,826	-				+2.8
4,022,826	-		Ga0059261_3911	0.52	+0.6
4,022,892	+		Ga0059261_3911	0.65	+1.2
4,022,912	+		Ga0059261_3911	0.69	-1.7
4,022,912	+		Ga0059261_3911	0.69	-0.2
4,022,912	+		Ga0059261_3911	0.69	-0.7
4,022,912	+		Ga0059261_3911	0.69	+0.0
4,022,912	+		Ga0059261_3911	0.69	-0.4
4,022,913	-		Ga0059261_3911	0.69	-1.2
4,022,913	-		Ga0059261_3911	0.69	+0.4
4,022,913	-		Ga0059261_3911	0.69	+1.5
4,022,913	-		Ga0059261_3911	0.69	+0.6
4,022,913	-		Ga0059261_3911	0.69	-0.8
4,022,913	-		Ga0059261_3911	0.69	-0.3
4,023,039	+				-0.4
4,023,065	+				+0.0
4,023,065	+				+3.0
4,023,065	+				+1.1
4,023,065	+				-1.0
4,023,065	+				-1.0
4,023,065	+				-0.2
4,023,065	+				+0.0
4,023,065	+				+0.6
4,023,065	+				+1.5
4,023,065	+				-1.6
4,023,065	+				-1.1
4,023,066	-				-1.8
4,023,066	-				+0.6
4,023,183	+		Ga0059261_3912	0.29	+0.6
4,023,183	+		Ga0059261_3912	0.29	-2.1
4,023,183	+		Ga0059261_3912	0.29	-1.7
4,023,183	+		Ga0059261_3912	0.29	-2.4
4,023,183	+		Ga0059261_3912	0.29	+0.4
4,023,183	+		Ga0059261_3912	0.29	+1.4
4,023,183	+		Ga0059261_3912	0.29	-0.4
4,023,184	-		Ga0059261_3912	0.30	+0.0
4,023,184	-		Ga0059261_3912	0.30	-1.4
4,023,184	-		Ga0059261_3912	0.30	+0.8
4,023,184	-		Ga0059261_3912	0.30	-1.6
4,023,184	-		Ga0059261_3912	0.30	-2.1
4,023,184	-		Ga0059261_3912	0.30	-1.4
4,023,184	-		Ga0059261_3912	0.30	-1.3
4,023,312	+		Ga0059261_3912	0.77	-1.6
4,023,312	+		Ga0059261_3912	0.77	+0.8
4,023,312	+		Ga0059261_3912	0.77	+1.0
4,023,312	+		Ga0059261_3912	0.77	-2.3
4,023,312	+		Ga0059261_3912	0.77	-0.5
4,023,312	+		Ga0059261_3912	0.77	-1.5
4,023,312	+		Ga0059261_3912	0.77	-1.9
4,023,312	+		Ga0059261_3912	0.77	+0.0
4,023,312	+		Ga0059261_3912	0.77	+1.3
4,023,312	+		Ga0059261_3912	0.77	-0.9
4,023,312	+		Ga0059261_3912	0.77	+1.6
4,023,312	+		Ga0059261_3912	0.77	+0.6
4,023,313	-		Ga0059261_3912	0.77	-0.3
4,023,313	-		Ga0059261_3912	0.77	-0.7
4,023,313	-		Ga0059261_3912	0.77	+0.7
4,023,313	-		Ga0059261_3912	0.77	-0.4
4,023,313	-		Ga0059261_3912	0.77	-1.8
4,023,313	-		Ga0059261_3912	0.77	+1.8
4,023,313	-		Ga0059261_3912	0.77	-0.8
4,023,354	+				-0.4
4,023,354	+				-0.8
4,023,355	-				+3.2
4,023,355	-				-1.0
4,023,408	-				-0.9
4,023,492	+				-1.5
4,023,492	+				+1.5
4,023,492	+				-2.2
4,023,492	+				-0.2
4,023,492	+				-0.1
4,023,492	+				+1.8
4,023,492	+				+0.6
4,023,492	+				-2.1
4,023,492	+				-0.3
4,023,493	-		Ga0059261_3913	0.10	-0.1
4,023,493	-		Ga0059261_3913	0.10	+2.1
4,023,493	-		Ga0059261_3913	0.10	+1.1
4,023,494	+		Ga0059261_3913	0.10	-0.1
4,023,494	+		Ga0059261_3913	0.10	+1.4
4,023,494	+		Ga0059261_3913	0.10	-1.3
4,023,495	-		Ga0059261_3913	0.10	+0.5
4,023,495	-		Ga0059261_3913	0.10	+2.3
4,023,500	+		Ga0059261_3913	0.11	+0.6
4,023,519	-		Ga0059261_3913	0.14	-2.1
4,023,528	+		Ga0059261_3913	0.15	+0.2
4,023,528	+		Ga0059261_3913	0.15	-0.2
4,023,560	+		Ga0059261_3913	0.20	+0.5
4,023,561	-		Ga0059261_3913	0.20	-0.8
4,023,656	+		Ga0059261_3913	0.34	+0.2
4,023,657	-		Ga0059261_3913	0.34	+0.5
4,023,657	-		Ga0059261_3913	0.34	+0.1
4,023,657	-		Ga0059261_3913	0.34	-0.7
4,023,657	-		Ga0059261_3913	0.34	+1.2
4,023,657	-				+2.8
4,023,702	+		Ga0059261_3913	0.41	-0.3
4,023,702	+		Ga0059261_3913	0.41	-0.4
4,023,702	+		Ga0059261_3913	0.41	-1.0
4,023,702	+		Ga0059261_3913	0.41	-2.1
4,023,702	+				+0.8
4,023,702	+		Ga0059261_3913	0.41	-1.7
4,023,702	+		Ga0059261_3913	0.41	-1.3
4,023,702	+		Ga0059261_3913	0.41	-0.9
4,023,703	-		Ga0059261_3913	0.41	-0.9
4,023,704	+		Ga0059261_3913	0.41	+1.2
4,023,704	+		Ga0059261_3913	0.41	+0.8
4,023,704	+		Ga0059261_3913	0.41	+3.1
4,023,704	+		Ga0059261_3913	0.41	-1.6
4,023,704	+		Ga0059261_3913	0.41	-0.5
4,023,704	+				+1.8
4,023,704	+		Ga0059261_3913	0.41	-1.6
4,023,705	-		Ga0059261_3913	0.41	-1.5
4,023,705	-		Ga0059261_3913	0.41	-0.6
4,023,705	-		Ga0059261_3913	0.41	-1.4
4,023,705	-		Ga0059261_3913	0.41	+1.8
4,023,705	-		Ga0059261_3913	0.41	-0.4
4,023,705	-		Ga0059261_3913	0.41	+0.7
4,023,899	+		Ga0059261_3913	0.69	+0.9
4,023,899	+		Ga0059261_3913	0.69	-0.6
4,023,900	-		Ga0059261_3913	0.70	-2.1
4,023,900	-		Ga0059261_3913	0.70	+0.2
4,023,900	-		Ga0059261_3913	0.70	-3.0
4,023,900	-		Ga0059261_3913	0.70	+0.3
4,023,903	+		Ga0059261_3913	0.70	-1.2
4,023,903	+		Ga0059261_3913	0.70	+0.6
4,023,903	+		Ga0059261_3913	0.70	-0.3
4,023,903	+				+0.5
4,023,903	+		Ga0059261_3913	0.70	+0.6
4,023,903	+		Ga0059261_3913	0.70	-0.2
4,023,903	+		Ga0059261_3913	0.70	-1.3
4,023,903	+		Ga0059261_3913	0.70	-0.3
4,023,903	+		Ga0059261_3913	0.70	-0.9
4,023,903	+		Ga0059261_3913	0.70	+3.0
4,023,903	+				+0.8
4,023,904	-		Ga0059261_3913	0.70	-1.4
4,023,904	-		Ga0059261_3913	0.70	+0.2
4,023,904	-		Ga0059261_3913	0.70	-0.5
4,023,904	-		Ga0059261_3913	0.70	+0.6
4,023,904	-		Ga0059261_3913	0.70	-0.2
4,023,904	-		Ga0059261_3913	0.70	-0.7
4,023,904	-		Ga0059261_3913	0.70	+2.6
4,023,904	-		Ga0059261_3913	0.70	-0.7
4,023,904	-		Ga0059261_3913	0.70	+1.8
4,023,904	-		Ga0059261_3913	0.70	-0.2
4,023,904	-		Ga0059261_3913	0.70	-1.0
4,023,904	-		Ga0059261_3913	0.70	+2.7
4,023,904	-		Ga0059261_3913	0.70	-0.2
4,023,904	-		Ga0059261_3913	0.70	-0.5
4,024,201	+				-0.7
4,024,201	+				+2.5
4,024,201	+				+1.8
4,024,201	+				-0.2
4,024,201	+				-1.2
4,024,201	+				-1.0
4,024,201	+				-0.3
4,024,202	-				-1.1
4,024,202	-				-0.4
4,024,202	-				-0.8
4,024,202	-				-0.9
4,024,202	-				+0.1
4,024,363	+		Ga0059261_3914	0.29	-0.3
4,024,363	+		Ga0059261_3914	0.29	-0.3
4,024,363	+		Ga0059261_3914	0.29	+1.0
4,024,363	+		Ga0059261_3914	0.29	+2.8
4,024,453	+		Ga0059261_3914	0.40	+0.1
4,024,453	+		Ga0059261_3914	0.40	+0.6
4,024,453	+		Ga0059261_3914	0.40	-0.9
4,024,453	+		Ga0059261_3914	0.40	+0.2
4,024,453	+		Ga0059261_3914	0.40	-1.6
4,024,454	-		Ga0059261_3914	0.40	-0.3
4,024,636	+		Ga0059261_3914	0.61	-1.2
4,024,637	-		Ga0059261_3914	0.62	+0.4
4,024,637	-		Ga0059261_3914	0.62	+0.7
4,024,729	+		Ga0059261_3914	0.73	-1.5
4,024,729	+		Ga0059261_3914	0.73	-0.5
4,024,729	+		Ga0059261_3914	0.73	-0.7
4,024,729	+		Ga0059261_3914	0.73	-0.5
4,024,729	+		Ga0059261_3914	0.73	-2.0
4,024,730	-		Ga0059261_3914	0.73	-0.2
4,024,730	-		Ga0059261_3914	0.73	+0.8
4,024,730	-		Ga0059261_3914	0.73	-2.1
4,024,730	-		Ga0059261_3914	0.73	-0.1
4,024,945	+				-1.7
4,024,945	+				-0.4
4,024,945	+				-1.8
4,024,945	+				+0.0
4,024,945	+				-2.0
4,024,945	+				-0.4
4,024,946	-				-0.4
4,024,946	-				-2.2
4,024,946	-				-0.8
4,024,946	-				-0.4
4,025,105	+				+1.2
4,025,105	+				+1.2
4,025,106	-				-1.4
4,025,106	-				-0.5
4,025,106	-				+1.1
4,025,106	-				+0.5