Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3002

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,135,151	+		Ga0059261_3001	0.61	+1.6
3,135,151	+		Ga0059261_3001	0.61	+2.1
3,135,151	+		Ga0059261_3001	0.61	-2.1
3,135,151	+		Ga0059261_3001	0.61	-2.7
3,135,151	+		Ga0059261_3001	0.61	+0.2
3,135,152	-		Ga0059261_3001	0.61	+2.2
3,135,152	-		Ga0059261_3001	0.61	+3.2
3,135,152	-		Ga0059261_3001	0.61	-1.0
3,135,153	+		Ga0059261_3001	0.61	+0.2
3,135,153	+		Ga0059261_3001	0.61	-0.8
3,135,153	+		Ga0059261_3001	0.61	-0.3
3,135,153	+		Ga0059261_3001	0.61	+0.2
3,135,153	+		Ga0059261_3001	0.61	-2.2
3,135,153	+		Ga0059261_3001	0.61	+0.4
3,135,153	+		Ga0059261_3001	0.61	-0.7
3,135,153	+		Ga0059261_3001	0.61	-1.1
3,135,153	+		Ga0059261_3001	0.61	-1.4
3,135,153	+		Ga0059261_3001	0.61	-0.4
3,135,153	+		Ga0059261_3001	0.61	+0.0
3,135,153	+		Ga0059261_3001	0.61	-0.1
3,135,153	+		Ga0059261_3001	0.61	-2.4
3,135,154	-		Ga0059261_3001	0.61	+1.2
3,135,154	-		Ga0059261_3001	0.61	+0.7
3,135,154	-		Ga0059261_3001	0.61	-0.5
3,135,154	-		Ga0059261_3001	0.61	-0.7
3,135,154	-		Ga0059261_3001	0.61	-0.1
3,135,154	-		Ga0059261_3001	0.61	-0.2
3,135,154	-		Ga0059261_3001	0.61	+0.0
3,135,154	-		Ga0059261_3001	0.61	-0.4
3,135,375	+		Ga0059261_3001	0.75	-0.5
3,135,376	-		Ga0059261_3001	0.75	-1.1
3,135,376	-		Ga0059261_3001	0.75	-1.5
3,135,655	+				-1.5
3,135,655	+				+1.6
3,135,655	+				-0.2
3,135,655	+				+2.8
3,135,655	+				+0.2
3,135,655	+				+0.6
3,135,655	+				-0.8
3,135,655	+				-1.5
3,135,655	+				+1.2
3,135,655	+				+0.2
3,135,655	+				+1.2
3,135,655	+				-0.4
3,135,655	+				-1.4
3,135,655	+				-0.8
3,135,656	-				+0.4
3,135,656	-				+2.2
3,135,656	-				-0.4
3,135,656	-				+0.2
3,135,656	-				-1.3
3,135,656	-				+0.5
3,135,656	-				-1.9
3,135,656	-				+0.5
3,135,656	-				+0.0
3,135,656	-				+0.0
3,135,656	-				-0.2
3,135,656	-				+0.6
3,135,656	-				-1.8
3,135,656	-				-0.9
3,135,656	-				+2.0
3,135,656	-				+1.2
3,135,656	-				-0.6
3,135,656	-				-0.4
3,135,656	-				-0.4
3,135,656	-				+1.2
3,135,663	+				-0.7
3,135,663	+				+1.1
3,135,663	+				+0.9
3,135,663	+				+0.6
3,135,663	+				-1.2
3,135,663	+				-0.4
3,135,663	+				+0.5
3,135,663	+				+0.9
3,135,663	+				-0.4
3,135,664	-				+0.8
3,135,664	-				-1.1
3,135,664	-				-0.6
3,135,664	-				+1.2
3,135,664	-				-0.4
3,135,664	-				-0.4
3,135,665	+				+1.2
3,135,665	+				+0.7
3,135,665	+				-1.5
3,135,665	+				+0.3
3,135,665	+				+1.4
3,135,665	+				+0.5
3,135,665	+				-0.8
3,135,665	+				+0.1
3,135,665	+				+7.7
3,135,665	+				-0.1
3,135,665	+				+0.5
3,135,666	-				+1.2
3,135,666	-				+0.4
3,135,666	-				-1.7
3,135,666	-				-1.9
3,135,666	-				+0.6
3,135,666	-				-0.6
3,135,854	+				-0.6
3,135,854	+				+0.0
3,135,854	+				-0.6
3,135,855	-				+2.4
3,135,855	-				+1.4
3,136,247	+				+0.2
3,136,247	+				-0.2
3,136,247	+				-0.8
3,136,247	+				-2.0
3,136,247	+				-0.8
3,136,248	-				-0.2
3,136,277	+		Ga0059261_3002	0.11	+1.2
3,136,277	+		Ga0059261_3002	0.11	+0.2
3,136,277	+		Ga0059261_3002	0.11	-0.7
3,136,277	+		Ga0059261_3002	0.11	+0.7
3,136,278	-		Ga0059261_3002	0.11	+1.2
3,136,278	-		Ga0059261_3002	0.11	-0.1
3,136,278	-		Ga0059261_3002	0.11	-0.6
3,136,278	-		Ga0059261_3002	0.11	+0.8
3,136,278	-		Ga0059261_3002	0.11	+0.3
3,136,323	-		Ga0059261_3002	0.15	-1.2
3,136,324	+		Ga0059261_3002	0.15	+0.8
3,136,324	+		Ga0059261_3002	0.15	+2.9
3,136,324	+		Ga0059261_3002	0.15	-0.5
3,136,324	+		Ga0059261_3002	0.15	+0.2
3,136,324	+		Ga0059261_3002	0.15	+0.0
3,136,325	-		Ga0059261_3002	0.15	+1.9
3,136,325	-		Ga0059261_3002	0.15	-0.3
3,136,325	-		Ga0059261_3002	0.15	-0.7
3,136,325	-		Ga0059261_3002	0.15	+0.8
3,136,325	-		Ga0059261_3002	0.15	+1.4
3,136,361	+		Ga0059261_3002	0.18	-1.8
3,136,362	-		Ga0059261_3002	0.19	-0.6
3,136,362	-		Ga0059261_3002	0.19	+0.2
3,136,643	+		Ga0059261_3002	0.43	-0.8
3,136,643	+		Ga0059261_3002	0.43	-0.2
3,136,643	+		Ga0059261_3002	0.43	-0.5
3,136,644	-				+1.2
3,136,644	-		Ga0059261_3002	0.43	+0.6
3,136,644	-		Ga0059261_3002	0.43	+0.7
3,136,644	-		Ga0059261_3002	0.43	+2.8
3,136,644	-		Ga0059261_3002	0.43	-2.6
3,136,644	-		Ga0059261_3002	0.43	+4.1
3,136,676	+		Ga0059261_3002	0.46	-1.3
3,136,676	+		Ga0059261_3002	0.46	+0.1
3,136,676	+		Ga0059261_3002	0.46	-1.3
3,136,676	+		Ga0059261_3002	0.46	+0.2
3,136,676	+		Ga0059261_3002	0.46	-1.8
3,136,676	+				+1.8
3,136,676	+		Ga0059261_3002	0.46	-3.2
3,136,676	+		Ga0059261_3002	0.46	-0.5
3,136,676	+		Ga0059261_3002	0.46	+1.2
3,136,676	+		Ga0059261_3002	0.46	+1.5
3,136,677	-		Ga0059261_3002	0.46	-0.1
3,136,677	-		Ga0059261_3002	0.46	+1.1
3,136,677	-		Ga0059261_3002	0.46	+0.7
3,136,677	-		Ga0059261_3002	0.46	+1.5
3,136,677	-		Ga0059261_3002	0.46	-2.0
3,136,677	-		Ga0059261_3002	0.46	+0.1
3,136,677	-		Ga0059261_3002	0.46	+3.2
3,136,677	-		Ga0059261_3002	0.46	+0.6
3,136,677	-		Ga0059261_3002	0.46	+0.9
3,136,677	-		Ga0059261_3002	0.46	+0.5
3,136,677	-		Ga0059261_3002	0.46	-0.2
3,136,678	+		Ga0059261_3002	0.46	-0.2
3,136,678	+		Ga0059261_3002	0.46	-0.8
3,136,678	+		Ga0059261_3002	0.46	-1.2
3,136,678	+		Ga0059261_3002	0.46	-1.5
3,136,679	-		Ga0059261_3002	0.46	-0.5
3,136,679	-		Ga0059261_3002	0.46	-1.2
3,136,679	-		Ga0059261_3002	0.46	-2.3
3,136,739	+		Ga0059261_3002	0.51	-0.2
3,136,740	-		Ga0059261_3002	0.51	-0.7
3,136,740	-		Ga0059261_3002	0.51	+1.0
3,136,740	-		Ga0059261_3002	0.51	+0.2
3,136,740	-		Ga0059261_3002	0.51	+0.5
3,137,027	-		Ga0059261_3002	0.76	-0.0
3,137,084	+		Ga0059261_3002	0.81	+2.2
3,137,108	+		Ga0059261_3002	0.83	+0.9
3,137,108	+		Ga0059261_3002	0.83	+0.1
3,137,108	+		Ga0059261_3002	0.83	-2.6
3,137,108	+		Ga0059261_3002	0.83	-2.3
3,137,109	-		Ga0059261_3002	0.83	+1.0
3,137,109	-		Ga0059261_3002	0.83	-0.8
3,137,109	-				+2.1
3,137,130	-		Ga0059261_3002	0.85	-1.9
3,137,130	-		Ga0059261_3002	0.85	-0.7
3,137,141	+		Ga0059261_3002	0.86	+0.9
3,137,141	+		Ga0059261_3002	0.86	-2.3
3,137,141	+		Ga0059261_3002	0.86	-0.9
3,137,141	+		Ga0059261_3002	0.86	+0.0
3,137,141	+		Ga0059261_3002	0.86	+0.9
3,137,141	+		Ga0059261_3002	0.86	-1.1
3,137,142	-		Ga0059261_3002	0.86	+1.4
3,137,142	-		Ga0059261_3002	0.86	-1.0
3,137,142	-		Ga0059261_3002	0.86	+0.3
3,137,142	-		Ga0059261_3002	0.86	+0.2
3,137,142	-		Ga0059261_3002	0.86	+2.6
3,137,142	-		Ga0059261_3002	0.86	+2.5
3,137,142	-		Ga0059261_3002	0.86	+0.8
3,137,142	-		Ga0059261_3002	0.86	+0.2
3,137,142	-		Ga0059261_3002	0.86	+0.3
3,137,142	-		Ga0059261_3002	0.86	+0.1
3,137,142	-		Ga0059261_3002	0.86	+1.5
3,137,195	+				+0.4
3,137,195	+				-0.1
3,137,195	+				+0.8
3,137,195	+				+1.1
3,137,196	-				-0.3
3,137,196	-				-0.8
3,137,196	-				-0.5
3,137,196	-				-0.5
3,137,196	-				+0.7
3,137,196	-				-0.5
3,137,196	-				+1.4
3,137,196	-				+0.1
3,137,196	-				-1.3
3,137,196	-				+1.8
3,137,196	-				-0.3
3,137,196	-				-0.7
3,137,196	-				-1.3
3,137,228	+				-0.8
3,137,228	+				+1.0
3,137,228	+				+0.0
3,137,228	+				-0.8
3,137,229	-				+0.6
3,137,229	-				-1.0
3,137,592	-		Ga0059261_3003	0.15	-0.1
3,137,664	+		Ga0059261_3003	0.20	-1.8
3,137,665	-		Ga0059261_3003	0.20	-0.0
3,137,665	-		Ga0059261_3003	0.20	+2.0
3,137,665	-		Ga0059261_3003	0.20	-0.8
3,137,665	-		Ga0059261_3003	0.20	+0.1
3,137,665	-		Ga0059261_3003	0.20	-0.9
3,137,685	+		Ga0059261_3003	0.22	+0.4
3,137,685	+		Ga0059261_3003	0.22	+0.4
3,137,685	+		Ga0059261_3003	0.22	-0.3
3,137,685	+		Ga0059261_3003	0.22	-0.1
3,137,685	+		Ga0059261_3003	0.22	-1.0
3,137,685	+		Ga0059261_3003	0.22	-0.8
3,137,686	-		Ga0059261_3003	0.22	-2.0
3,137,686	-				+1.2
3,137,686	-		Ga0059261_3003	0.22	-1.5
3,137,686	-		Ga0059261_3003	0.22	-2.5
3,137,797	+		Ga0059261_3003	0.29	+0.3
3,137,797	+		Ga0059261_3003	0.29	+1.0
3,137,797	+		Ga0059261_3003	0.29	-0.5
3,137,797	+		Ga0059261_3003	0.29	+2.1
3,137,797	+		Ga0059261_3003	0.29	-0.7
3,137,797	+		Ga0059261_3003	0.29	+1.1
3,137,797	+		Ga0059261_3003	0.29	+0.0
3,137,797	+		Ga0059261_3003	0.29	-1.6
3,137,797	+		Ga0059261_3003	0.29	+3.7
3,137,798	-		Ga0059261_3003	0.29	-0.4
3,137,798	-		Ga0059261_3003	0.29	-1.2
3,137,798	-		Ga0059261_3003	0.29	-0.2
3,137,798	-		Ga0059261_3003	0.29	+0.4
3,137,798	-		Ga0059261_3003	0.29	-1.3
3,137,798	-		Ga0059261_3003	0.29	-1.9
3,137,798	-		Ga0059261_3003	0.29	-2.3
3,137,798	-		Ga0059261_3003	0.29	+0.0
3,137,798	-		Ga0059261_3003	0.29	-2.7
3,137,835	+		Ga0059261_3003	0.31	+0.5
3,137,903	-				+1.2
3,137,967	+		Ga0059261_3003	0.40	+0.0
3,137,967	+		Ga0059261_3003	0.40	-0.6
3,137,968	-		Ga0059261_3003	0.40	-0.2
3,137,968	-		Ga0059261_3003	0.40	+0.5
3,137,968	-		Ga0059261_3003	0.40	-0.8
3,137,968	-		Ga0059261_3003	0.40	-0.9
3,137,973	+		Ga0059261_3003	0.40	-0.1
3,137,974	-		Ga0059261_3003	0.41	+0.5
3,137,974	-		Ga0059261_3003	0.41	-1.7
3,137,974	-		Ga0059261_3003	0.41	-0.6
3,137,974	-		Ga0059261_3003	0.41	+0.0
3,137,974	-		Ga0059261_3003	0.41	-1.6
3,138,040	+		Ga0059261_3003	0.45	-1.5
3,138,219	+		Ga0059261_3003	0.57	-0.4
3,138,219	+		Ga0059261_3003	0.57	-2.1
3,138,219	+		Ga0059261_3003	0.57	+2.8
3,138,219	+		Ga0059261_3003	0.57	-1.0
3,138,219	+		Ga0059261_3003	0.57	-1.3
3,138,219	+		Ga0059261_3003	0.57	+0.2
3,138,219	+		Ga0059261_3003	0.57	-0.6
3,138,219	+		Ga0059261_3003	0.57	-1.3
3,138,219	+		Ga0059261_3003	0.57	-1.4
3,138,220	-		Ga0059261_3003	0.57	+0.9
3,138,220	-		Ga0059261_3003	0.57	-1.9
3,138,220	-		Ga0059261_3003	0.57	+0.9
3,138,220	-		Ga0059261_3003	0.57	+0.5
3,138,220	-		Ga0059261_3003	0.57	-2.2
3,138,247	+		Ga0059261_3003	0.59	-2.7
3,138,247	+		Ga0059261_3003	0.59	+0.1
3,138,247	+		Ga0059261_3003	0.59	-0.9
3,138,247	+		Ga0059261_3003	0.59	-1.8
3,138,248	-		Ga0059261_3003	0.59	-1.1
3,138,248	-		Ga0059261_3003	0.59	-2.6
3,138,248	-		Ga0059261_3003	0.59	+0.2
3,138,248	-		Ga0059261_3003	0.59	-1.0
3,138,248	-		Ga0059261_3003	0.59	-0.3
3,138,249	+		Ga0059261_3003	0.59	+0.3
3,138,249	+		Ga0059261_3003	0.59	-0.4
3,138,249	+		Ga0059261_3003	0.59	+1.5
3,138,249	+		Ga0059261_3003	0.59	-1.0
3,138,250	-		Ga0059261_3003	0.59	+0.2
3,138,250	-		Ga0059261_3003	0.59	-0.5
3,138,250	-		Ga0059261_3003	0.59	-0.3
3,138,250	-		Ga0059261_3003	0.59	+0.8
3,138,267	+		Ga0059261_3003	0.60	-0.5