Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2920

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,028,880	+		Ga0059261_2918	0.88	+0.0
3,029,049	+				+0.8
3,029,049	+				-2.2
3,029,114	+		Ga0059261_2919	0.17	+0.7
3,029,114	+		Ga0059261_2919	0.17	-0.3
3,029,115	-		Ga0059261_2919	0.17	-0.7
3,029,115	-		Ga0059261_2919	0.17	-1.2
3,029,115	-		Ga0059261_2919	0.17	+1.5
3,029,115	-		Ga0059261_2919	0.17	+0.5
3,029,135	+		Ga0059261_2919	0.19	-0.3
3,029,135	+		Ga0059261_2919	0.19	-0.1
3,029,135	+		Ga0059261_2919	0.19	+0.0
3,029,135	+		Ga0059261_2919	0.19	-1.1
3,029,135	+		Ga0059261_2919	0.19	+0.0
3,029,136	-		Ga0059261_2919	0.19	-1.1
3,029,136	-		Ga0059261_2919	0.19	+3.5
3,029,136	-		Ga0059261_2919	0.19	-0.6
3,029,136	-		Ga0059261_2919	0.19	+1.1
3,029,136	-		Ga0059261_2919	0.19	+0.1
3,029,136	-		Ga0059261_2919	0.19	+1.0
3,029,141	+		Ga0059261_2919	0.20	-0.3
3,029,159	+		Ga0059261_2919	0.22	-1.4
3,029,160	-		Ga0059261_2919	0.22	-0.2
3,029,169	-		Ga0059261_2919	0.23	+2.8
3,029,169	-		Ga0059261_2919	0.23	+3.4
3,029,169	-		Ga0059261_2919	0.23	-0.4
3,029,169	-		Ga0059261_2919	0.23	-1.7
3,029,169	-		Ga0059261_2919	0.23	-0.4
3,029,169	-		Ga0059261_2919	0.23	-1.7
3,029,242	+		Ga0059261_2919	0.32	+0.6
3,029,243	-		Ga0059261_2919	0.32	-0.7
3,029,248	-		Ga0059261_2919	0.32	+0.4
3,029,248	-		Ga0059261_2919	0.32	-0.6
3,029,369	+		Ga0059261_2919	0.46	-0.1
3,029,369	+		Ga0059261_2919	0.46	-0.7
3,029,369	+		Ga0059261_2919	0.46	-1.6
3,029,369	+		Ga0059261_2919	0.46	+0.5
3,029,370	-		Ga0059261_2919	0.47	+0.1
3,029,370	-		Ga0059261_2919	0.47	+0.3
3,029,370	-		Ga0059261_2919	0.47	+0.4
3,029,426	+		Ga0059261_2919	0.53	+0.3
3,029,426	+		Ga0059261_2919	0.53	+2.0
3,029,426	+		Ga0059261_2919	0.53	+0.2
3,029,427	-		Ga0059261_2919	0.53	-1.4
3,029,529	-		Ga0059261_2919	0.65	+0.4
3,029,594	+		Ga0059261_2919	0.73	-0.4
3,029,594	+		Ga0059261_2919	0.73	-1.6
3,029,594	+		Ga0059261_2919	0.73	+2.5
3,029,594	+		Ga0059261_2919	0.73	-1.3
3,029,594	+		Ga0059261_2919	0.73	+0.9
3,029,594	+				+3.4
3,029,594	+		Ga0059261_2919	0.73	+4.4
3,029,594	+		Ga0059261_2919	0.73	-0.9
3,029,595	-		Ga0059261_2919	0.73	-0.4
3,029,595	-		Ga0059261_2919	0.73	-2.0
3,029,595	-		Ga0059261_2919	0.73	-0.5
3,029,595	-		Ga0059261_2919	0.73	-1.7
3,029,595	-		Ga0059261_2919	0.73	-1.5
3,029,595	-		Ga0059261_2919	0.73	+0.5
3,029,595	-		Ga0059261_2919	0.73	-0.7
3,029,597	-		Ga0059261_2919	0.73	-0.1
3,029,681	+		Ga0059261_2919	0.83	+1.8
3,029,681	+		Ga0059261_2919	0.83	+0.3
3,029,681	+		Ga0059261_2919	0.83	-0.6
3,029,682	-		Ga0059261_2919	0.83	+0.9
3,029,682	-		Ga0059261_2919	0.83	+0.5
3,029,699	+		Ga0059261_2919	0.85	-1.3
3,029,699	+		Ga0059261_2919	0.85	-0.9
3,029,699	+		Ga0059261_2919	0.85	-0.5
3,029,699	+		Ga0059261_2919	0.85	-0.4
3,029,699	+		Ga0059261_2919	0.85	-1.0
3,029,699	+		Ga0059261_2919	0.85	-1.0
3,029,699	+		Ga0059261_2919	0.85	+0.3
3,029,699	+		Ga0059261_2919	0.85	-0.4
3,029,699	+		Ga0059261_2919	0.85	+2.8
3,029,699	+				+5.2
3,029,699	+		Ga0059261_2919	0.85	-1.3
3,029,699	+		Ga0059261_2919	0.85	+1.5
3,029,700	-		Ga0059261_2919	0.85	+0.8
3,029,700	-		Ga0059261_2919	0.85	-1.0
3,029,700	-		Ga0059261_2919	0.85	-0.7
3,029,700	-		Ga0059261_2919	0.85	+0.5
3,029,700	-		Ga0059261_2919	0.85	-1.4
3,029,700	-		Ga0059261_2919	0.85	-0.5
3,029,702	+		Ga0059261_2919	0.86	-0.3
3,029,702	+		Ga0059261_2919	0.86	-1.4
3,029,702	+		Ga0059261_2919	0.86	+1.3
3,029,702	+		Ga0059261_2919	0.86	+0.2
3,029,702	+		Ga0059261_2919	0.86	-0.6
3,029,702	+		Ga0059261_2919	0.86	+1.2
3,029,702	+		Ga0059261_2919	0.86	-0.6
3,029,702	+		Ga0059261_2919	0.86	+0.7
3,029,702	+		Ga0059261_2919	0.86	-0.3
3,029,702	+		Ga0059261_2919	0.86	-0.3
3,029,702	+		Ga0059261_2919	0.86	-1.6
3,029,703	-		Ga0059261_2919	0.86	+1.3
3,029,703	-				+2.8
3,029,703	-		Ga0059261_2919	0.86	+0.3
3,029,703	-		Ga0059261_2919	0.86	+0.5
3,029,703	-		Ga0059261_2919	0.86	+1.3
3,029,703	-		Ga0059261_2919	0.86	-1.0
3,029,703	-		Ga0059261_2919	0.86	-0.2
3,029,703	-		Ga0059261_2919	0.86	-0.9
3,029,736	+		Ga0059261_2919	0.90	+3.0
3,029,736	+		Ga0059261_2919	0.90	-2.7
3,029,737	-		Ga0059261_2919	0.90	-1.6
3,029,847	+				+1.0
3,029,847	+				-1.4
3,029,847	+				-0.4
3,029,848	-				+1.3
3,029,848	-				-1.3
3,029,848	-				-1.3
3,030,035	+		Ga0059261_2920	0.17	-0.9
3,030,035	+		Ga0059261_2920	0.17	+0.8
3,030,035	+		Ga0059261_2920	0.17	+2.8
3,030,035	+		Ga0059261_2920	0.17	+0.3
3,030,035	+		Ga0059261_2920	0.17	-1.0
3,030,036	-		Ga0059261_2920	0.18	-0.9
3,030,036	-		Ga0059261_2920	0.18	-1.5
3,030,082	+		Ga0059261_2920	0.21	-1.2
3,030,082	+		Ga0059261_2920	0.21	-1.5
3,030,083	-		Ga0059261_2920	0.21	-2.7
3,030,083	-		Ga0059261_2920	0.21	+0.3
3,030,092	+		Ga0059261_2920	0.22	-0.9
3,030,092	+		Ga0059261_2920	0.22	-1.9
3,030,092	+		Ga0059261_2920	0.22	+0.7
3,030,093	-		Ga0059261_2920	0.22	-1.1
3,030,481	+		Ga0059261_2920	0.54	-1.2
3,030,481	+		Ga0059261_2920	0.54	-0.6
3,030,481	+		Ga0059261_2920	0.54	-0.6
3,030,481	+		Ga0059261_2920	0.54	+0.3
3,030,481	+		Ga0059261_2920	0.54	-1.2
3,030,482	-		Ga0059261_2920	0.54	-0.9
3,030,482	-		Ga0059261_2920	0.54	-0.6
3,030,482	-		Ga0059261_2920	0.54	-1.8
3,030,482	-		Ga0059261_2920	0.54	+0.0
3,030,482	-		Ga0059261_2920	0.54	-1.2
3,030,580	+		Ga0059261_2920	0.62	-0.6
3,030,580	+		Ga0059261_2920	0.62	+0.1
3,030,580	+		Ga0059261_2920	0.62	-0.9
3,030,580	+				+2.8
3,030,581	-				+7.1
3,030,581	-		Ga0059261_2920	0.62	-0.8
3,030,581	-		Ga0059261_2920	0.62	+0.0
3,030,581	-		Ga0059261_2920	0.62	-2.7
3,030,609	+		Ga0059261_2920	0.64	+0.0
3,030,610	-		Ga0059261_2920	0.64	-1.5
3,030,640	+		Ga0059261_2920	0.67	-2.0
3,030,640	+		Ga0059261_2920	0.67	+0.8
3,030,640	+		Ga0059261_2920	0.67	-1.9
3,030,640	+		Ga0059261_2920	0.67	-0.5
3,030,640	+		Ga0059261_2920	0.67	+0.0
3,030,640	+		Ga0059261_2920	0.67	+0.1
3,030,640	+		Ga0059261_2920	0.67	+0.5
3,030,641	-		Ga0059261_2920	0.67	+0.8
3,030,641	-		Ga0059261_2920	0.67	-0.6
3,030,641	-		Ga0059261_2920	0.67	-1.8
3,030,641	-		Ga0059261_2920	0.67	+1.0
3,030,641	-		Ga0059261_2920	0.67	-2.5
3,030,641	-		Ga0059261_2920	0.67	-1.4
3,030,645	+		Ga0059261_2920	0.67	+0.0
3,030,645	+		Ga0059261_2920	0.67	-1.0
3,030,645	+		Ga0059261_2920	0.67	-0.7
3,030,646	-		Ga0059261_2920	0.67	+1.9
3,030,646	-		Ga0059261_2920	0.67	+0.3
3,030,646	-		Ga0059261_2920	0.67	-2.3
3,030,646	-		Ga0059261_2920	0.67	+0.8
3,030,758	-		Ga0059261_2920	0.77	+3.0
3,030,758	-		Ga0059261_2920	0.77	+2.1
3,030,758	-		Ga0059261_2920	0.77	+0.9
3,030,758	-		Ga0059261_2920	0.77	-1.1
3,031,001	+				-0.3
3,031,001	+				+0.8
3,031,001	+				+0.1
3,031,002	-				-1.1
3,031,002	-				-0.6
3,031,002	-				+2.1
3,031,042	+				-2.3
3,031,042	+				+0.8
3,031,042	+				-1.3
3,031,042	+				-1.9
3,031,042	+				+0.4
3,031,042	+				-0.4
3,031,042	+				-0.2
3,031,042	+				+0.3
3,031,042	+				-0.4
3,031,043	-				+0.4
3,031,043	-				-0.5
3,031,043	-				-1.0
3,031,043	-				-0.3
3,031,043	-				-1.5
3,031,043	-				-0.1
3,031,043	-				+1.8
3,031,043	-				-0.3
3,031,043	-				+1.8
3,031,043	-				+1.3
3,031,043	-				+1.4
3,031,043	-				-1.8
3,031,100	+				+0.3
3,031,101	-		Ga0059261_2921	0.25	-1.7
3,031,113	+		Ga0059261_2921	0.30	-1.0
3,031,114	-		Ga0059261_2921	0.30	+1.3
3,031,114	-		Ga0059261_2921	0.30	-1.6
3,031,138	+		Ga0059261_2921	0.41	+0.7
3,031,139	-		Ga0059261_2921	0.41	+1.8
3,031,139	-		Ga0059261_2921	0.41	-0.1
3,031,150	+		Ga0059261_2921	0.46	-2.8
3,031,150	+		Ga0059261_2921	0.46	-0.5
3,031,150	+				+0.5
3,031,151	-		Ga0059261_2921	0.46	-1.3
3,031,151	-		Ga0059261_2921	0.46	+1.8
3,031,151	-		Ga0059261_2921	0.46	+0.3
3,031,151	-		Ga0059261_2921	0.46	-1.1
3,031,158	+		Ga0059261_2921	0.50	-1.3
3,031,159	-		Ga0059261_2921	0.50	+0.6
3,031,162	+		Ga0059261_2921	0.51	-0.5
3,031,162	+		Ga0059261_2921	0.51	-1.6
3,031,162	+		Ga0059261_2921	0.51	-2.0
3,031,162	+		Ga0059261_2921	0.51	-0.2
3,031,162	+		Ga0059261_2921	0.51	+1.8
3,031,162	+		Ga0059261_2921	0.51	-0.5
3,031,162	+		Ga0059261_2921	0.51	-0.9
3,031,162	+		Ga0059261_2921	0.51	+0.5
3,031,162	+		Ga0059261_2921	0.51	+0.2
3,031,163	-		Ga0059261_2921	0.52	+0.9
3,031,163	-		Ga0059261_2921	0.52	-0.5
3,031,163	-		Ga0059261_2921	0.52	+0.3
3,031,163	-		Ga0059261_2921	0.52	+0.8
3,031,312	+				-1.2
3,031,312	+				+0.7
3,031,313	-				-1.8
3,031,313	-				-0.8
3,031,389	+		Ga0059261_2922	0.44	+1.7
3,031,389	+		Ga0059261_2922	0.44	+3.8
3,031,389	+		Ga0059261_2922	0.44	+0.8
3,031,390	-		Ga0059261_2922	0.45	-0.9
3,031,390	-		Ga0059261_2922	0.45	+1.2
3,031,400	+		Ga0059261_2922	0.50	+0.5
3,031,400	+		Ga0059261_2922	0.50	+0.0
3,031,401	-		Ga0059261_2922	0.50	-1.8
3,031,401	-		Ga0059261_2922	0.50	+0.2
3,031,401	-		Ga0059261_2922	0.50	-1.7
3,031,401	-		Ga0059261_2922	0.50	+1.2
3,031,461	+		Ga0059261_2922	0.79	-0.3
3,031,462	+		Ga0059261_2922	0.79	-0.9
3,031,462	+		Ga0059261_2922	0.79	-1.0
3,031,462	+		Ga0059261_2922	0.79	-0.4
3,031,462	+		Ga0059261_2922	0.79	+0.8
3,031,462	+		Ga0059261_2922	0.79	-1.0
3,031,463	-		Ga0059261_2922	0.80	+2.2
3,031,463	-		Ga0059261_2922	0.80	-2.8
3,031,463	-				+2.8
3,031,463	-		Ga0059261_2922	0.80	-2.1
3,031,463	-		Ga0059261_2922	0.80	+0.9
3,031,534	+				-0.1
3,031,535	-				+1.4
3,031,535	-				-1.3
3,031,535	-				+0.6
3,031,583	+		Ga0059261_2923	0.17	-0.8
3,031,584	-		Ga0059261_2923	0.17	+0.2
3,031,584	-		Ga0059261_2923	0.17	+0.6
3,031,711	+		Ga0059261_2923	0.36	-0.1
3,031,711	+		Ga0059261_2923	0.36	-0.8
3,031,711	+		Ga0059261_2923	0.36	-1.2
3,031,711	+		Ga0059261_2923	0.36	-1.4
3,031,711	+		Ga0059261_2923	0.36	+0.2
3,031,712	-		Ga0059261_2923	0.36	+0.9
3,031,772	+		Ga0059261_2923	0.45	-0.3
3,031,789	-		Ga0059261_2923	0.47	-0.4
3,031,822	+		Ga0059261_2923	0.52	-1.3
3,031,822	+		Ga0059261_2923	0.52	+0.5
3,031,822	+		Ga0059261_2923	0.52	+1.7
3,031,822	+		Ga0059261_2923	0.52	+0.8
3,031,822	+		Ga0059261_2923	0.52	+0.3
3,031,822	+				+2.8
3,031,823	-		Ga0059261_2923	0.52	-0.2
3,031,864	+		Ga0059261_2923	0.58	+1.2
3,031,865	+		Ga0059261_2923	0.58	-0.6
3,031,865	+		Ga0059261_2923	0.58	-1.5
3,031,865	+		Ga0059261_2923	0.58	-1.0
3,031,865	+		Ga0059261_2923	0.58	-0.5
3,031,865	+		Ga0059261_2923	0.58	-0.7
3,031,865	+		Ga0059261_2923	0.58	+0.8
3,031,865	+		Ga0059261_2923	0.58	-0.3
3,031,865	+		Ga0059261_2923	0.58	-0.9
3,031,865	+		Ga0059261_2923	0.58	+0.3
3,031,865	+		Ga0059261_2923	0.58	-1.3
3,031,865	+		Ga0059261_2923	0.58	+0.3
3,031,865	+		Ga0059261_2923	0.58	-0.8
3,031,866	-		Ga0059261_2923	0.58	+1.8
3,031,866	-		Ga0059261_2923	0.58	-2.6
3,031,866	-		Ga0059261_2923	0.58	-0.1
3,031,866	-		Ga0059261_2923	0.58	+0.5
3,031,866	-		Ga0059261_2923	0.58	-0.0
3,031,866	-		Ga0059261_2923	0.58	-0.6
3,031,866	-		Ga0059261_2923	0.58	-1.3
3,031,866	-		Ga0059261_2923	0.58	+1.4
3,031,866	-		Ga0059261_2923	0.58	-1.6
3,031,866	-		Ga0059261_2923	0.58	+0.3
3,031,866	-		Ga0059261_2923	0.58	+0.6
3,031,866	-		Ga0059261_2923	0.58	-0.7
3,031,866	-		Ga0059261_2923	0.58	+4.7
3,031,866	-		Ga0059261_2923	0.58	+2.1
3,031,866	-		Ga0059261_2923	0.58	-0.2
3,031,866	-		Ga0059261_2923	0.58	-1.3
3,031,973	+		Ga0059261_2923	0.74	+0.1
3,031,974	-		Ga0059261_2923	0.74	-2.4
3,031,974	-		Ga0059261_2923	0.74	-1.4
3,031,974	-		Ga0059261_2923	0.74	-0.7
3,031,975	+		Ga0059261_2923	0.74	-0.7
3,031,975	+		Ga0059261_2923	0.74	+2.5
3,031,975	+		Ga0059261_2923	0.74	+0.5
3,031,975	+		Ga0059261_2923	0.74	+0.7
3,031,975	+		Ga0059261_2923	0.74	+0.8
3,031,975	+		Ga0059261_2923	0.74	+0.6
3,031,975	+		Ga0059261_2923	0.74	+0.1
3,031,976	-		Ga0059261_2923	0.74	-0.9
3,031,976	-		Ga0059261_2923	0.74	+0.1
3,031,976	-		Ga0059261_2923	0.74	+1.4
3,031,976	-		Ga0059261_2923	0.74	-1.6
3,031,976	-		Ga0059261_2923	0.74	-0.5
3,031,976	-		Ga0059261_2923	0.74	-0.2
3,031,976	-		Ga0059261_2923	0.74	-0.9