Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2822

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,929,336	+		Ga0059261_2820	0.48	+2.1
2,929,336	+		Ga0059261_2820	0.48	-0.1
2,929,336	+		Ga0059261_2820	0.48	-0.5
2,929,336	+		Ga0059261_2820	0.48	-0.7
2,929,336	+		Ga0059261_2820	0.48	-0.7
2,929,337	-		Ga0059261_2820	0.48	+0.8
2,929,337	-		Ga0059261_2820	0.48	-1.6
2,929,390	-		Ga0059261_2820	0.56	+1.5
2,929,390	-		Ga0059261_2820	0.56	-1.7
2,929,390	-		Ga0059261_2820	0.56	-2.3
2,929,530	+		Ga0059261_2820	0.78	+1.4
2,929,530	+		Ga0059261_2820	0.78	+0.1
2,929,530	+		Ga0059261_2820	0.78	+1.9
2,929,530	+				+1.9
2,929,531	-		Ga0059261_2820	0.78	+1.7
2,929,531	-		Ga0059261_2820	0.78	+2.4
2,929,583	-		Ga0059261_2820	0.86	+0.4
2,929,607	-		Ga0059261_2820	0.90	+0.1
2,929,607	-		Ga0059261_2820	0.90	+1.4
2,929,607	-		Ga0059261_2820	0.90	-1.0
2,929,607	-		Ga0059261_2820	0.90	-2.2
2,929,620	-				-1.4
2,929,620	-				-0.2
2,929,706	+				-1.1
2,929,706	+				-2.6
2,929,706	+				-1.2
2,929,784	+		Ga0059261_2821	0.28	-0.1
2,929,784	+		Ga0059261_2821	0.28	-0.5
2,929,785	-		Ga0059261_2821	0.28	-0.2
2,929,785	-		Ga0059261_2821	0.28	-1.4
2,929,785	-		Ga0059261_2821	0.28	+1.6
2,929,785	-		Ga0059261_2821	0.28	-0.2
2,929,809	+		Ga0059261_2821	0.36	+0.0
2,929,810	-		Ga0059261_2821	0.37	+1.1
2,929,810	-		Ga0059261_2821	0.37	-0.1
2,929,838	+		Ga0059261_2821	0.47	+0.1
2,929,838	+				+1.9
2,929,838	+		Ga0059261_2821	0.47	-0.1
2,929,838	+		Ga0059261_2821	0.47	-0.1
2,929,838	+		Ga0059261_2821	0.47	+0.2
2,929,839	-		Ga0059261_2821	0.47	-0.5
2,929,839	-		Ga0059261_2821	0.47	+0.6
2,929,839	-		Ga0059261_2821	0.47	-0.6
2,929,839	-		Ga0059261_2821	0.47	-1.4
2,929,979	+				+2.8
2,929,979	+				+1.9
2,929,980	-				-1.1
2,929,980	-				+2.4
2,930,070	-				-0.8
2,930,182	+				+0.9
2,930,183	-				+0.9
2,930,259	+				+1.4
2,930,259	+				-0.2
2,930,259	+				-1.4
2,930,260	-				-0.9
2,930,260	-				-2.1
2,930,260	-				+1.3
2,930,301	+				+0.7
2,930,301	+				-0.9
2,930,301	+				+0.6
2,930,301	+				-0.9
2,930,301	+				+0.6
2,930,301	+				-0.6
2,930,301	+				+0.1
2,930,301	+				-0.1
2,930,302	-				-1.4
2,930,302	-				-0.6
2,930,302	-				+1.8
2,930,302	-				+0.5
2,930,302	-				+1.9
2,930,302	-				+1.6
2,930,302	-				-1.8
2,930,319	+				+0.3
2,930,319	+				-1.1
2,930,319	+				+0.4
2,930,320	-				+1.9
2,930,320	-				+0.1
2,930,373	+				-0.4
2,930,373	+				-2.0
2,930,373	+				+3.0
2,930,373	+				+1.0
2,930,374	-				-0.9
2,930,466	+				+0.4
2,930,466	+				+0.1
2,930,466	+				-1.2
2,930,511	+				-0.8
2,930,511	+				-0.4
2,930,511	+				-1.4
2,930,511	+				-0.6
2,930,511	+				+0.6
2,930,512	-				-0.8
2,930,529	+		Ga0059261_2822	0.10	+1.4
2,930,583	+		Ga0059261_2822	0.13	+1.1
2,930,583	+		Ga0059261_2822	0.13	-0.5
2,930,583	+		Ga0059261_2822	0.13	+0.7
2,930,584	-		Ga0059261_2822	0.13	-1.5
2,930,584	-		Ga0059261_2822	0.13	-0.8
2,930,584	-		Ga0059261_2822	0.13	+2.2
2,930,584	-		Ga0059261_2822	0.13	+0.4
2,930,619	+		Ga0059261_2822	0.14	-0.5
2,930,619	+		Ga0059261_2822	0.14	-0.9
2,930,697	+		Ga0059261_2822	0.17	-1.8
2,930,698	-		Ga0059261_2822	0.17	-1.7
2,930,712	+		Ga0059261_2822	0.18	-0.1
2,930,713	-		Ga0059261_2822	0.18	-1.2
2,930,713	-		Ga0059261_2822	0.18	-1.1
2,930,713	-		Ga0059261_2822	0.18	+6.9
2,930,720	-		Ga0059261_2822	0.18	-0.5
2,930,720	-		Ga0059261_2822	0.18	-0.2
2,930,839	+		Ga0059261_2822	0.23	+1.6
2,930,839	+		Ga0059261_2822	0.23	-1.2
2,930,895	+		Ga0059261_2822	0.25	-1.2
2,930,895	+		Ga0059261_2822	0.25	-0.9
2,930,895	+		Ga0059261_2822	0.25	-1.7
2,930,895	+		Ga0059261_2822	0.25	+0.2
2,930,895	+		Ga0059261_2822	0.25	+0.0
2,930,895	+		Ga0059261_2822	0.25	+0.0
2,930,895	+		Ga0059261_2822	0.25	-2.8
2,930,895	+		Ga0059261_2822	0.25	-1.6
2,930,895	+		Ga0059261_2822	0.25	-1.1
2,930,895	+		Ga0059261_2822	0.25	+0.3
2,930,895	+		Ga0059261_2822	0.25	-1.5
2,930,895	+		Ga0059261_2822	0.25	+0.5
2,930,895	+		Ga0059261_2822	0.25	+0.5
2,930,895	+		Ga0059261_2822	0.25	+1.9
2,930,895	+		Ga0059261_2822	0.25	-2.3
2,930,895	+		Ga0059261_2822	0.25	+2.7
2,930,895	+		Ga0059261_2822	0.25	-1.0
2,930,895	+		Ga0059261_2822	0.25	-0.4
2,930,895	+		Ga0059261_2822	0.25	-0.2
2,930,896	-		Ga0059261_2822	0.25	+0.1
2,930,896	-		Ga0059261_2822	0.25	+4.9
2,930,896	-		Ga0059261_2822	0.25	-2.2
2,930,896	-		Ga0059261_2822	0.25	+0.0
2,930,896	-		Ga0059261_2822	0.25	+0.4
2,930,896	-		Ga0059261_2822	0.25	-0.1
2,930,896	-		Ga0059261_2822	0.25	+1.2
2,930,896	-		Ga0059261_2822	0.25	-0.4
2,930,896	-		Ga0059261_2822	0.25	-0.1
2,930,896	-		Ga0059261_2822	0.25	-0.1
2,930,896	-		Ga0059261_2822	0.25	+1.4
2,930,896	-		Ga0059261_2822	0.25	+0.5
2,930,997	+		Ga0059261_2822	0.30	-1.6
2,930,997	+		Ga0059261_2822	0.30	-0.5
2,930,997	+		Ga0059261_2822	0.30	+0.7
2,930,997	+		Ga0059261_2822	0.30	-2.8
2,930,997	+		Ga0059261_2822	0.30	+1.6
2,930,997	+		Ga0059261_2822	0.30	-0.0
2,930,997	+		Ga0059261_2822	0.30	+0.2
2,930,997	+		Ga0059261_2822	0.30	-0.2
2,930,997	+		Ga0059261_2822	0.30	+0.9
2,930,997	+		Ga0059261_2822	0.30	-1.0
2,930,997	+		Ga0059261_2822	0.30	+0.8
2,930,998	-		Ga0059261_2822	0.30	-0.2
2,930,998	-		Ga0059261_2822	0.30	+1.1
2,930,998	-		Ga0059261_2822	0.30	+1.7
2,930,998	-		Ga0059261_2822	0.30	+0.6
2,930,998	-		Ga0059261_2822	0.30	+0.3
2,930,998	-		Ga0059261_2822	0.30	-3.0
2,930,998	-		Ga0059261_2822	0.30	+0.4
2,930,998	-		Ga0059261_2822	0.30	+1.3
2,931,078	+		Ga0059261_2822	0.33	-2.7
2,931,079	-		Ga0059261_2822	0.33	-1.7
2,931,105	+		Ga0059261_2822	0.34	-0.5
2,931,105	+		Ga0059261_2822	0.34	-0.4
2,931,105	+		Ga0059261_2822	0.34	+0.8
2,931,105	+		Ga0059261_2822	0.34	+2.9
2,931,164	+		Ga0059261_2822	0.36	-0.9
2,931,165	-		Ga0059261_2822	0.36	-0.2
2,931,246	+		Ga0059261_2822	0.40	+0.3
2,931,246	+		Ga0059261_2822	0.40	+0.1
2,931,247	-		Ga0059261_2822	0.40	+0.1
2,931,247	-		Ga0059261_2822	0.40	+0.1
2,931,247	-		Ga0059261_2822	0.40	-0.2
2,931,247	-		Ga0059261_2822	0.40	-2.2
2,931,247	-		Ga0059261_2822	0.40	-1.1
2,931,262	+		Ga0059261_2822	0.40	-1.2
2,931,262	+		Ga0059261_2822	0.40	-0.4
2,931,263	-		Ga0059261_2822	0.40	+1.1
2,931,264	+		Ga0059261_2822	0.40	+0.2
2,931,264	+		Ga0059261_2822	0.40	+0.1
2,931,264	+		Ga0059261_2822	0.40	-0.2
2,931,264	+		Ga0059261_2822	0.40	+0.6
2,931,265	-		Ga0059261_2822	0.40	+0.2
2,931,265	-		Ga0059261_2822	0.40	-0.5
2,931,379	+		Ga0059261_2822	0.45	-0.4
2,931,379	+		Ga0059261_2822	0.45	-0.7
2,931,380	-		Ga0059261_2822	0.45	+1.3
2,931,384	+		Ga0059261_2822	0.45	+0.5
2,931,384	+		Ga0059261_2822	0.45	-0.0
2,931,385	-		Ga0059261_2822	0.45	-0.9
2,931,385	-		Ga0059261_2822	0.45	-0.1
2,931,468	+		Ga0059261_2822	0.49	+0.6
2,931,468	+		Ga0059261_2822	0.49	-2.7
2,931,468	+		Ga0059261_2822	0.49	-1.2
2,931,468	+		Ga0059261_2822	0.49	+0.3
2,931,468	+		Ga0059261_2822	0.49	+0.9
2,931,468	+		Ga0059261_2822	0.49	+1.2
2,931,469	-		Ga0059261_2822	0.49	-0.4
2,931,469	-		Ga0059261_2822	0.49	+1.9
2,931,469	-		Ga0059261_2822	0.49	+1.3
2,931,469	-		Ga0059261_2822	0.49	-0.4
2,931,469	-		Ga0059261_2822	0.49	-1.8
2,931,469	-		Ga0059261_2822	0.49	+2.1
2,931,469	-		Ga0059261_2822	0.49	+0.3
2,931,488	-		Ga0059261_2822	0.50	-1.7
2,931,488	-		Ga0059261_2822	0.50	+1.1
2,931,609	+		Ga0059261_2822	0.55	-1.3
2,931,609	+		Ga0059261_2822	0.55	+1.1
2,931,609	+		Ga0059261_2822	0.55	-0.9
2,931,610	-		Ga0059261_2822	0.55	+0.3
2,931,615	+		Ga0059261_2822	0.55	-0.4
2,931,628	-		Ga0059261_2822	0.55	+4.8
2,931,628	-		Ga0059261_2822	0.55	-0.7
2,931,628	-		Ga0059261_2822	0.55	+1.0
2,931,793	+		Ga0059261_2822	0.62	+0.5
2,931,794	-		Ga0059261_2822	0.62	-0.8
2,931,794	-		Ga0059261_2822	0.62	-1.0
2,931,850	-		Ga0059261_2822	0.64	+0.8
2,931,850	-		Ga0059261_2822	0.64	+2.9
2,931,895	+		Ga0059261_2822	0.66	+0.9
2,931,896	-		Ga0059261_2822	0.66	+0.8
2,931,903	+		Ga0059261_2822	0.67	-0.8
2,931,903	+		Ga0059261_2822	0.67	+5.4
2,931,903	+		Ga0059261_2822	0.67	-0.5
2,931,903	+		Ga0059261_2822	0.67	+0.7
2,931,903	+				+0.9
2,931,903	+		Ga0059261_2822	0.67	-0.2
2,931,904	-		Ga0059261_2822	0.67	+0.2
2,931,904	-		Ga0059261_2822	0.67	-0.7
2,931,904	-				+3.2
2,931,904	-		Ga0059261_2822	0.67	-1.7
2,931,904	-		Ga0059261_2822	0.67	-2.5
2,931,904	-		Ga0059261_2822	0.67	-1.4
2,931,904	-		Ga0059261_2822	0.67	+0.7
2,932,104	+		Ga0059261_2822	0.75	+2.2
2,932,104	+				+1.3
2,932,104	+		Ga0059261_2822	0.75	-0.9
2,932,104	+		Ga0059261_2822	0.75	-1.5
2,932,104	+		Ga0059261_2822	0.75	+1.1
2,932,104	+		Ga0059261_2822	0.75	-3.2
2,932,105	-		Ga0059261_2822	0.75	-0.9
2,932,105	-		Ga0059261_2822	0.75	-1.1
2,932,105	-		Ga0059261_2822	0.75	+0.6
2,932,105	-		Ga0059261_2822	0.75	-0.3
2,932,113	+		Ga0059261_2822	0.75	-0.7
2,932,113	+		Ga0059261_2822	0.75	-1.0
2,932,113	+		Ga0059261_2822	0.75	-0.4
2,932,114	-		Ga0059261_2822	0.75	+4.5
2,932,114	-		Ga0059261_2822	0.75	-0.6
2,932,114	-		Ga0059261_2822	0.75	-0.5
2,932,128	+		Ga0059261_2822	0.76	-0.9
2,932,128	+		Ga0059261_2822	0.76	-1.7
2,932,245	+		Ga0059261_2822	0.80	+1.1
2,932,245	+		Ga0059261_2822	0.80	+1.6
2,932,245	+		Ga0059261_2822	0.80	-0.0
2,932,245	+		Ga0059261_2822	0.80	+1.1
2,932,245	+		Ga0059261_2822	0.80	+0.4
2,932,246	-		Ga0059261_2822	0.80	-0.9
2,932,246	-		Ga0059261_2822	0.80	+0.6
2,932,269	+		Ga0059261_2822	0.81	-1.4
2,932,269	+		Ga0059261_2822	0.81	-1.3
2,932,269	+		Ga0059261_2822	0.81	-0.3
2,932,269	+		Ga0059261_2822	0.81	-0.9
2,932,269	+		Ga0059261_2822	0.81	-1.8
2,932,269	+		Ga0059261_2822	0.81	-2.1
2,932,269	+		Ga0059261_2822	0.81	-2.3
2,932,269	+		Ga0059261_2822	0.81	+0.9
2,932,269	+				+1.9
2,932,269	+		Ga0059261_2822	0.81	-0.6
2,932,269	+		Ga0059261_2822	0.81	+0.9
2,932,269	+				+2.9
2,932,269	+		Ga0059261_2822	0.81	-1.0
2,932,270	-		Ga0059261_2822	0.81	-0.2
2,932,270	-		Ga0059261_2822	0.81	-1.2
2,932,270	-		Ga0059261_2822	0.81	+0.9
2,932,270	-		Ga0059261_2822	0.81	+0.8
2,932,270	-		Ga0059261_2822	0.81	+0.8
2,932,270	-		Ga0059261_2822	0.81	+1.1
2,932,270	-		Ga0059261_2822	0.81	+0.2
2,932,270	-		Ga0059261_2822	0.81	-0.9
2,932,270	-		Ga0059261_2822	0.81	+0.9
2,932,270	-		Ga0059261_2822	0.81	-1.0
2,932,270	-		Ga0059261_2822	0.81	-2.2
2,932,293	+		Ga0059261_2822	0.82	+1.3
2,932,294	-		Ga0059261_2822	0.82	-2.2
2,932,294	-		Ga0059261_2822	0.82	-0.5
2,932,294	-		Ga0059261_2822	0.82	-1.2
2,932,297	+		Ga0059261_2822	0.83	-0.8
2,932,297	+		Ga0059261_2822	0.83	-0.1
2,932,297	+		Ga0059261_2822	0.83	-0.2
2,932,297	+		Ga0059261_2822	0.83	-0.0
2,932,298	-		Ga0059261_2822	0.83	+0.7
2,932,298	-		Ga0059261_2822	0.83	+0.2
2,932,298	-		Ga0059261_2822	0.83	-1.1
2,932,298	-		Ga0059261_2822	0.83	+0.9
2,932,298	-		Ga0059261_2822	0.83	+0.1
2,932,386	+		Ga0059261_2822	0.86	-0.0
2,932,386	+		Ga0059261_2822	0.86	+2.2
2,932,387	-		Ga0059261_2822	0.86	-0.7
2,932,387	-		Ga0059261_2822	0.86	-1.5
2,932,387	-		Ga0059261_2822	0.86	+3.2
2,932,387	-		Ga0059261_2822	0.86	-1.3
2,932,387	-		Ga0059261_2822	0.86	-1.0
2,932,723	+				-1.3
2,932,723	+				+0.9
2,932,723	+				-1.5
2,932,724	-				-0.8
2,932,724	-				-0.6
2,932,724	-				-0.3
2,932,724	-				+0.6
2,932,752	+				-1.6
2,932,752	+				+1.3
2,932,753	-				+0.0
2,932,753	-				+2.1
2,932,777	+				+1.9
2,932,777	+				+1.9
2,932,777	+				+1.1
2,932,778	-				+0.1
2,932,778	-				+0.4
2,932,778	-				-0.6
2,932,778	-				-0.0
2,932,778	-				+4.9
2,932,778	-				+0.3
2,932,778	-				-1.6
2,932,896	+				-0.2
2,932,897	-				-0.2
2,932,897	-				-0.2
2,933,085	+		Ga0059261_2823	0.27	+1.3
2,933,085	+		Ga0059261_2823	0.27	-1.2
2,933,085	+		Ga0059261_2823	0.27	+0.0
2,933,085	+		Ga0059261_2823	0.27	+0.6
2,933,086	-		Ga0059261_2823	0.27	-1.2
2,933,086	-		Ga0059261_2823	0.27	+0.3
2,933,218	+		Ga0059261_2823	0.42	-1.6
2,933,219	-		Ga0059261_2823	0.42	-1.0
2,933,262	+		Ga0059261_2823	0.47	+1.2
2,933,262	+		Ga0059261_2823	0.47	+0.9
2,933,262	+		Ga0059261_2823	0.47	-0.5
2,933,262	+		Ga0059261_2823	0.47	-0.5
2,933,262	+		Ga0059261_2823	0.47	+3.2
2,933,262	+		Ga0059261_2823	0.47	-1.2
2,933,263	-		Ga0059261_2823	0.48	-1.6
2,933,263	-				+2.9
2,933,263	-		Ga0059261_2823	0.48	+0.0
2,933,263	-		Ga0059261_2823	0.48	+0.4
2,933,263	-		Ga0059261_2823	0.48	+0.9
2,933,263	-		Ga0059261_2823	0.48	+0.3
2,933,263	-		Ga0059261_2823	0.48	+0.1
2,933,263	-		Ga0059261_2823	0.48	+0.8
2,933,263	-		Ga0059261_2823	0.48	+2.6
2,933,263	-		Ga0059261_2823	0.48	-1.0
2,933,263	-		Ga0059261_2823	0.48	-0.9
2,933,334	+		Ga0059261_2823	0.56	-0.5
2,933,334	+		Ga0059261_2823	0.56	+0.8
2,933,335	-				+1.9
2,933,368	+		Ga0059261_2823	0.60	+2.4
2,933,369	-		Ga0059261_2823	0.60	-1.3
2,933,369	-		Ga0059261_2823	0.60	-0.1
2,933,369	-		Ga0059261_2823	0.60	-2.0
2,933,369	-		Ga0059261_2823	0.60	-0.8
2,933,369	-		Ga0059261_2823	0.60	-1.0