Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2290

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,393,363	+		Ga0059261_2289	0.48	-0.7
2,393,363	+		Ga0059261_2289	0.48	-0.5
2,393,363	+		Ga0059261_2289	0.48	-0.7
2,393,363	+				+1.3
2,393,363	+		Ga0059261_2289	0.48	+0.8
2,393,363	+		Ga0059261_2289	0.48	+1.0
2,393,363	+				+0.8
2,393,363	+		Ga0059261_2289	0.48	-2.4
2,393,363	+		Ga0059261_2289	0.48	-1.2
2,393,363	+		Ga0059261_2289	0.48	-1.4
2,393,363	+		Ga0059261_2289	0.48	-1.3
2,393,364	-		Ga0059261_2289	0.48	-1.3
2,393,364	-		Ga0059261_2289	0.48	+1.1
2,393,364	-		Ga0059261_2289	0.48	-0.6
2,393,364	-		Ga0059261_2289	0.48	+3.0
2,393,364	-		Ga0059261_2289	0.48	-2.1
2,393,364	-		Ga0059261_2289	0.48	+0.0
2,393,364	-		Ga0059261_2289	0.48	+1.5
2,393,364	-		Ga0059261_2289	0.48	-1.1
2,393,364	-		Ga0059261_2289	0.48	+0.1
2,393,364	-		Ga0059261_2289	0.48	-1.9
2,393,365	+		Ga0059261_2289	0.48	+0.9
2,393,365	+		Ga0059261_2289	0.48	+0.0
2,393,365	+		Ga0059261_2289	0.48	+0.0
2,393,365	+		Ga0059261_2289	0.48	+1.5
2,393,365	+		Ga0059261_2289	0.48	+1.7
2,393,365	+		Ga0059261_2289	0.48	+0.5
2,393,365	+		Ga0059261_2289	0.48	-0.3
2,393,366	-		Ga0059261_2289	0.48	+1.2
2,393,366	-		Ga0059261_2289	0.48	-1.0
2,393,366	-		Ga0059261_2289	0.48	+0.5
2,393,366	-		Ga0059261_2289	0.48	-1.1
2,393,366	-		Ga0059261_2289	0.48	-1.0
2,393,366	-		Ga0059261_2289	0.48	-0.7
2,393,382	+		Ga0059261_2289	0.49	-0.3
2,393,382	+		Ga0059261_2289	0.49	-2.2
2,393,383	-		Ga0059261_2289	0.49	+2.8
2,393,444	-		Ga0059261_2289	0.53	-0.7
2,393,535	+		Ga0059261_2289	0.59	+0.0
2,393,644	+		Ga0059261_2289	0.66	-1.9
2,393,645	-		Ga0059261_2289	0.66	+2.8
2,393,645	-		Ga0059261_2289	0.66	-1.0
2,393,665	+		Ga0059261_2289	0.68	+1.1
2,393,665	+		Ga0059261_2289	0.68	-1.8
2,393,665	+		Ga0059261_2289	0.68	+1.4
2,393,665	+		Ga0059261_2289	0.68	-0.3
2,393,665	+		Ga0059261_2289	0.68	+1.1
2,393,665	+		Ga0059261_2289	0.68	-0.2
2,393,665	+		Ga0059261_2289	0.68	+0.3
2,393,665	+		Ga0059261_2289	0.68	+0.8
2,393,666	-		Ga0059261_2289	0.68	+0.7
2,393,666	-		Ga0059261_2289	0.68	+0.9
2,393,666	-		Ga0059261_2289	0.68	+0.0
2,393,666	-		Ga0059261_2289	0.68	+0.2
2,393,671	+		Ga0059261_2289	0.68	+0.1
2,393,671	+		Ga0059261_2289	0.68	+1.1
2,393,671	+				+2.8
2,393,671	+		Ga0059261_2289	0.68	+0.8
2,393,671	+		Ga0059261_2289	0.68	+0.0
2,393,672	-		Ga0059261_2289	0.68	-0.3
2,393,672	-		Ga0059261_2289	0.68	+2.8
2,393,672	-		Ga0059261_2289	0.68	-1.2
2,393,672	-		Ga0059261_2289	0.68	+0.0
2,393,672	-		Ga0059261_2289	0.68	-0.5
2,393,672	-		Ga0059261_2289	0.68	+0.3
2,393,672	-		Ga0059261_2289	0.68	+0.5
2,393,747	+		Ga0059261_2289	0.73	-0.4
2,393,747	+		Ga0059261_2289	0.73	-1.2
2,393,747	+		Ga0059261_2289	0.73	+0.5
2,393,747	+		Ga0059261_2289	0.73	+0.3
2,393,747	+		Ga0059261_2289	0.73	-2.0
2,393,747	+		Ga0059261_2289	0.73	+3.8
2,393,748	-		Ga0059261_2289	0.73	-0.2
2,393,748	-		Ga0059261_2289	0.73	+1.3
2,393,748	-		Ga0059261_2289	0.73	-0.6
2,393,748	-		Ga0059261_2289	0.73	-0.7
2,393,748	-		Ga0059261_2289	0.73	-0.2
2,393,748	-		Ga0059261_2289	0.73	+1.1
2,393,748	-		Ga0059261_2289	0.73	-0.3
2,393,758	+		Ga0059261_2289	0.74	-0.5
2,393,758	+		Ga0059261_2289	0.74	+0.4
2,393,759	-		Ga0059261_2289	0.74	-0.2
2,393,759	-		Ga0059261_2289	0.74	+0.5
2,393,759	-		Ga0059261_2289	0.74	+0.0
2,393,759	-		Ga0059261_2289	0.74	-1.5
2,393,863	+		Ga0059261_2289	0.80	-0.1
2,393,863	+		Ga0059261_2289	0.80	+1.4
2,393,864	-		Ga0059261_2289	0.80	-0.9
2,393,968	+		Ga0059261_2289	0.87	-1.0
2,393,968	+		Ga0059261_2289	0.87	-1.2
2,393,968	+				+1.8
2,393,968	+		Ga0059261_2289	0.87	+2.7
2,393,968	+		Ga0059261_2289	0.87	-0.2
2,393,968	+		Ga0059261_2289	0.87	+2.6
2,393,969	-		Ga0059261_2289	0.87	-0.5
2,393,969	-		Ga0059261_2289	0.87	-0.9
2,393,969	-		Ga0059261_2289	0.87	+0.8
2,393,969	-		Ga0059261_2289	0.87	-0.7
2,393,969	-		Ga0059261_2289	0.87	+3.4
2,394,209	+				+0.5
2,394,209	+				-0.7
2,394,209	+				-0.3
2,394,209	+				-1.0
2,394,209	+				-0.8
2,394,209	+				-0.3
2,394,209	+				-0.9
2,394,209	+				-1.5
2,394,209	+				+1.0
2,394,209	+				-1.7
2,394,209	+				-0.2
2,394,209	+				-0.1
2,394,209	+				+1.8
2,394,209	+				+1.3
2,394,209	+				-1.5
2,394,209	+				-0.2
2,394,209	+				+0.5
2,394,210	-				+0.1
2,394,210	-				-1.5
2,394,210	-				+3.4
2,394,210	-				-1.6
2,394,210	-				-1.7
2,394,210	-				-0.2
2,394,210	-				+0.6
2,394,211	+				+2.5
2,394,211	+				-1.5
2,394,212	-				-1.2
2,394,220	-				+2.0
2,394,220	-				-0.6
2,394,223	+				-2.0
2,394,223	+				-1.1
2,394,223	+				-0.8
2,394,223	+				+0.0
2,394,223	+				-1.2
2,394,223	+				+0.7
2,394,223	+				+1.3
2,394,223	+				+0.0
2,394,223	+				+0.2
2,394,223	+				-1.5
2,394,223	+				-1.2
2,394,224	-				+3.3
2,394,224	-				-0.2
2,394,224	-				-1.2
2,394,224	-				+1.3
2,394,224	-				-0.2
2,394,224	-				-0.4
2,394,225	+				+4.1
2,394,225	+				-0.8
2,394,225	+				+0.1
2,394,225	+				-0.6
2,394,225	+				+0.1
2,394,225	+				+0.3
2,394,225	+				+0.7
2,394,225	+				-0.4
2,394,225	+				-1.0
2,394,225	+				+0.4
2,394,225	+				-1.3
2,394,225	+				+0.3
2,394,225	+				-0.7
2,394,226	-				-0.3
2,394,226	-				+0.5
2,394,226	-				-1.5
2,394,226	-				+0.3
2,394,226	-				-1.6
2,394,226	-				+0.1
2,394,226	-				-0.6
2,394,226	-				-1.2
2,394,226	-				-0.3
2,394,226	-				-2.2
2,394,227	-				+0.5
2,394,299	+				-0.0
2,394,300	-				-0.3
2,394,300	-				-1.7
2,394,557	+				-2.0
2,394,559	+				+0.4
2,394,559	+				-0.3
2,394,559	+				+0.3
2,394,559	+				-1.2
2,394,560	-				-0.9
2,394,560	-				+1.1
2,394,560	-				-0.1
2,394,560	-				-0.5
2,394,560	-				-0.6
2,394,560	-				-0.7
2,394,564	+				-1.7
2,394,564	+				-1.1
2,394,564	+				-1.6
2,394,565	-				+0.5
2,394,637	-				-1.4
2,394,824	+		Ga0059261_2291	0.13	+0.6
2,395,072	-		Ga0059261_2291	0.31	+0.3
2,395,072	-		Ga0059261_2291	0.31	-0.7