Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1924

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,031,281	+		Ga0059261_1922	0.35	+2.8
2,031,281	+		Ga0059261_1922	0.35	+2.2
2,031,282	-		Ga0059261_1922	0.35	-0.8
2,031,282	-		Ga0059261_1922	0.35	+0.0
2,031,338	+		Ga0059261_1922	0.41	+0.2
2,031,338	+		Ga0059261_1922	0.41	-0.3
2,031,338	+		Ga0059261_1922	0.41	-0.5
2,031,338	+		Ga0059261_1922	0.41	+2.5
2,031,338	+		Ga0059261_1922	0.41	+1.2
2,031,338	+		Ga0059261_1922	0.41	+0.8
2,031,338	+		Ga0059261_1922	0.41	+0.7
2,031,338	+		Ga0059261_1922	0.41	-0.7
2,031,339	-		Ga0059261_1922	0.42	+3.0
2,031,339	-		Ga0059261_1922	0.42	+0.0
2,031,647	+		Ga0059261_1922	0.78	+3.0
2,031,647	+		Ga0059261_1922	0.78	+0.2
2,031,648	-		Ga0059261_1922	0.78	-0.7
2,031,648	-		Ga0059261_1922	0.78	+2.5
2,031,669	-		Ga0059261_1922	0.81	-0.5
2,031,680	+		Ga0059261_1922	0.82	+0.6
2,031,680	+		Ga0059261_1922	0.82	+0.2
2,031,680	+		Ga0059261_1922	0.82	-0.5
2,031,680	+		Ga0059261_1922	0.82	-0.7
2,031,681	-		Ga0059261_1922	0.82	+0.0
2,031,681	-		Ga0059261_1922	0.82	-2.2
2,031,681	-		Ga0059261_1922	0.82	+1.3
2,031,681	-		Ga0059261_1922	0.82	-0.9
2,031,827	+				+0.0
2,031,828	-				-0.9
2,031,828	-				+2.0
2,032,146	+		Ga0059261_1923	0.79	-1.5
2,032,146	+		Ga0059261_1923	0.79	-0.4
2,032,146	+		Ga0059261_1923	0.79	+0.7
2,032,146	+		Ga0059261_1923	0.79	-0.8
2,032,146	+		Ga0059261_1923	0.79	+0.2
2,032,147	-		Ga0059261_1923	0.79	+0.5
2,032,147	-		Ga0059261_1923	0.79	+0.1
2,032,147	-		Ga0059261_1923	0.79	+0.4
2,032,175	-		Ga0059261_1923	0.88	-1.5
2,032,175	-				+4.0
2,032,212	+				+0.1
2,032,212	+				+0.0
2,032,212	+				+0.2
2,032,213	-				-0.1
2,032,213	-				-1.0
2,032,213	-				-1.0
2,032,213	-				+2.0
2,032,213	-				-1.0
2,032,213	-				+1.5
2,032,309	+				-0.1
2,032,309	+				+0.3
2,032,309	+				-0.9
2,032,309	+				-0.6
2,032,309	+				+1.9
2,032,309	+				-0.4
2,032,310	-				+2.0
2,032,310	-				-1.2
2,032,310	-				+0.4
2,032,310	-				-1.2
2,032,310	-				+0.5
2,032,310	-				+0.7
2,032,405	+		Ga0059261_1924	0.13	+1.5
2,032,405	+		Ga0059261_1924	0.13	-0.7
2,032,405	+		Ga0059261_1924	0.13	-1.0
2,032,405	+		Ga0059261_1924	0.13	+0.3
2,032,405	+		Ga0059261_1924	0.13	-0.5
2,032,405	+		Ga0059261_1924	0.13	-0.4
2,032,405	+		Ga0059261_1924	0.13	-1.7
2,032,405	+		Ga0059261_1924	0.13	-0.3
2,032,406	-		Ga0059261_1924	0.13	+2.0
2,032,406	-		Ga0059261_1924	0.13	-2.0
2,032,406	-		Ga0059261_1924	0.13	+3.0
2,032,406	-		Ga0059261_1924	0.13	-1.0
2,032,406	-		Ga0059261_1924	0.13	-1.3
2,032,406	-		Ga0059261_1924	0.13	-0.3
2,032,406	-		Ga0059261_1924	0.13	+0.7
2,032,555	+		Ga0059261_1924	0.25	-2.6
2,032,555	+		Ga0059261_1924	0.25	-0.1
2,032,556	-		Ga0059261_1924	0.25	-0.9
2,032,556	-		Ga0059261_1924	0.25	-0.5
2,032,556	-		Ga0059261_1924	0.25	-0.7
2,032,556	-		Ga0059261_1924	0.25	-0.5
2,032,556	-		Ga0059261_1924	0.25	-0.4
2,032,595	-		Ga0059261_1924	0.28	-0.7
2,032,595	-		Ga0059261_1924	0.28	-0.6
2,032,595	-		Ga0059261_1924	0.28	-1.0
2,032,612	+		Ga0059261_1924	0.30	+1.2
2,032,613	-		Ga0059261_1924	0.30	+0.1
2,032,624	+		Ga0059261_1924	0.31	-2.1
2,032,624	+		Ga0059261_1924	0.31	+1.4
2,032,624	+		Ga0059261_1924	0.31	+1.0
2,032,624	+		Ga0059261_1924	0.31	+2.3
2,032,624	+		Ga0059261_1924	0.31	+0.7
2,032,624	+		Ga0059261_1924	0.31	+0.5
2,032,624	+		Ga0059261_1924	0.31	-0.3
2,032,625	-		Ga0059261_1924	0.31	+1.7
2,032,625	-		Ga0059261_1924	0.31	-1.1
2,032,625	-		Ga0059261_1924	0.31	+1.8
2,032,625	-		Ga0059261_1924	0.31	-3.0
2,032,625	-		Ga0059261_1924	0.31	-0.4
2,032,625	-		Ga0059261_1924	0.31	+0.7
2,032,625	-		Ga0059261_1924	0.31	-2.3
2,032,625	-		Ga0059261_1924	0.31	-0.7
2,032,625	-		Ga0059261_1924	0.31	-0.8
2,032,625	-		Ga0059261_1924	0.31	+1.0
2,032,625	-		Ga0059261_1924	0.31	-0.3
2,032,720	+		Ga0059261_1924	0.39	-0.4
2,032,720	+		Ga0059261_1924	0.39	-1.5
2,032,720	+		Ga0059261_1924	0.39	-1.4
2,032,720	+		Ga0059261_1924	0.39	+0.4
2,032,721	-		Ga0059261_1924	0.39	+0.5
2,032,721	-		Ga0059261_1924	0.39	-1.4
2,032,721	-		Ga0059261_1924	0.39	+0.2
2,032,918	+		Ga0059261_1924	0.55	+1.0
2,032,919	-		Ga0059261_1924	0.55	+1.3
2,032,919	-		Ga0059261_1924	0.55	+0.7
2,032,999	+		Ga0059261_1924	0.61	-1.2
2,033,092	+		Ga0059261_1924	0.69	-0.9
2,033,092	+		Ga0059261_1924	0.69	+0.6
2,033,092	+		Ga0059261_1924	0.69	-1.0
2,033,092	+		Ga0059261_1924	0.69	+2.0
2,033,093	-		Ga0059261_1924	0.69	+1.2
2,033,170	+		Ga0059261_1924	0.75	+0.7
2,033,170	+		Ga0059261_1924	0.75	-2.0
2,033,170	+		Ga0059261_1924	0.75	+0.5
2,033,171	-		Ga0059261_1924	0.75	-0.8
2,033,278	+		Ga0059261_1924	0.84	-0.5
2,033,278	+		Ga0059261_1924	0.84	+1.0
2,033,278	+		Ga0059261_1924	0.84	+0.9
2,033,278	+		Ga0059261_1924	0.84	+0.2
2,033,278	+		Ga0059261_1924	0.84	-0.5
2,033,279	-		Ga0059261_1924	0.84	-0.6
2,033,279	-		Ga0059261_1924	0.84	+0.3
2,033,279	-		Ga0059261_1924	0.84	+0.4
2,033,279	-		Ga0059261_1924	0.84	-2.0
2,033,282	+		Ga0059261_1924	0.84	-0.9
2,033,282	+		Ga0059261_1924	0.84	-1.9
2,033,282	+		Ga0059261_1924	0.84	-0.5
2,033,282	+		Ga0059261_1924	0.84	+0.2
2,033,282	+		Ga0059261_1924	0.84	+1.5
2,033,282	+		Ga0059261_1924	0.84	+0.7
2,033,282	+		Ga0059261_1924	0.84	-1.2
2,033,282	+		Ga0059261_1924	0.84	-0.3
2,033,282	+		Ga0059261_1924	0.84	-0.1
2,033,282	+		Ga0059261_1924	0.84	+0.1
2,033,283	-		Ga0059261_1924	0.84	-1.0
2,033,283	-		Ga0059261_1924	0.84	+0.8
2,033,283	-		Ga0059261_1924	0.84	-1.5
2,033,283	-		Ga0059261_1924	0.84	-0.3
2,033,283	-		Ga0059261_1924	0.84	-1.3
2,033,283	-		Ga0059261_1924	0.84	-1.1
2,033,283	-		Ga0059261_1924	0.84	+0.8
2,033,283	-		Ga0059261_1924	0.84	+3.0
2,033,283	-		Ga0059261_1924	0.84	+0.5
2,033,283	-		Ga0059261_1924	0.84	+1.0
2,033,283	-		Ga0059261_1924	0.84	-1.1
2,033,283	-		Ga0059261_1924	0.84	+0.5
2,033,283	-		Ga0059261_1924	0.84	-1.3
2,033,283	-		Ga0059261_1924	0.84	+0.1
2,033,283	-		Ga0059261_1924	0.84	+3.6
2,033,284	+		Ga0059261_1924	0.84	+0.4
2,033,284	+				+0.7
2,033,284	+		Ga0059261_1924	0.84	+0.7
2,033,284	+		Ga0059261_1924	0.84	-1.6
2,033,284	+		Ga0059261_1924	0.84	-0.5
2,033,284	+		Ga0059261_1924	0.84	+0.0
2,033,284	+		Ga0059261_1924	0.84	-1.5
2,033,284	+		Ga0059261_1924	0.84	-1.0
2,033,284	+		Ga0059261_1924	0.84	+0.9
2,033,284	+		Ga0059261_1924	0.84	-0.3
2,033,284	+		Ga0059261_1924	0.84	-1.7
2,033,284	+		Ga0059261_1924	0.84	-0.3
2,033,285	-		Ga0059261_1924	0.84	-0.6
2,033,285	-		Ga0059261_1924	0.84	-1.4
2,033,285	-		Ga0059261_1924	0.84	+1.6
2,033,285	-		Ga0059261_1924	0.84	+2.4
2,033,285	-		Ga0059261_1924	0.84	-0.6
2,033,285	-		Ga0059261_1924	0.84	+2.3
2,033,285	-		Ga0059261_1924	0.84	-0.3
2,033,285	-		Ga0059261_1924	0.84	-0.8
2,033,285	-		Ga0059261_1924	0.84	+1.5
2,033,285	-		Ga0059261_1924	0.84	+2.5
2,033,285	-		Ga0059261_1924	0.84	-0.8
2,033,285	-		Ga0059261_1924	0.84	+0.5
2,033,285	-		Ga0059261_1924	0.84	-1.0
2,033,285	-		Ga0059261_1924	0.84	-1.1
2,033,285	-		Ga0059261_1924	0.84	-0.6
2,033,287	+		Ga0059261_1924	0.85	+1.0
2,033,287	+		Ga0059261_1924	0.85	-0.4
2,033,287	+		Ga0059261_1924	0.85	+0.2
2,033,287	+		Ga0059261_1924	0.85	+0.0
2,033,287	+		Ga0059261_1924	0.85	-1.2
2,033,287	+		Ga0059261_1924	0.85	-0.5
2,033,287	+		Ga0059261_1924	0.85	-2.6
2,033,287	+		Ga0059261_1924	0.85	+1.3
2,033,288	-		Ga0059261_1924	0.85	-0.3
2,033,288	-		Ga0059261_1924	0.85	-0.5
2,033,288	-		Ga0059261_1924	0.85	-0.2
2,033,288	-		Ga0059261_1924	0.85	+1.0
2,033,288	-		Ga0059261_1924	0.85	+0.2
2,033,288	-		Ga0059261_1924	0.85	+0.6
2,033,923	+				-0.4
2,033,924	-				-1.3
2,033,924	-				-1.0
2,034,014	+				+3.7
2,034,014	+				+1.6
2,034,014	+				-0.5
2,034,015	-				+1.0
2,034,015	-				-0.7
2,034,015	-				-1.0
2,034,197	-				-0.3
2,034,197	-				+1.5
2,034,197	-				+0.5
2,034,341	-		Ga0059261_1926	0.19	-1.3
2,034,341	-		Ga0059261_1926	0.19	+0.7
2,034,341	-		Ga0059261_1926	0.19	-1.3
2,034,346	+		Ga0059261_1926	0.19	+0.7
2,034,346	+		Ga0059261_1926	0.19	-0.1
2,034,346	+		Ga0059261_1926	0.19	-2.2
2,034,346	+		Ga0059261_1926	0.19	+0.0
2,034,346	+		Ga0059261_1926	0.19	+0.3
2,034,346	+		Ga0059261_1926	0.19	-0.3
2,034,346	+		Ga0059261_1926	0.19	+2.2
2,034,347	-		Ga0059261_1926	0.20	-0.4
2,034,347	-		Ga0059261_1926	0.20	-1.5
2,034,355	+		Ga0059261_1926	0.20	+0.4
2,034,364	+		Ga0059261_1926	0.21	+0.2
2,034,364	+		Ga0059261_1926	0.21	-0.7
2,034,364	+		Ga0059261_1926	0.21	-2.8
2,034,364	+		Ga0059261_1926	0.21	+0.1
2,034,364	+		Ga0059261_1926	0.21	-0.5
2,034,364	+		Ga0059261_1926	0.21	+1.1
2,034,364	+		Ga0059261_1926	0.21	+1.5
2,034,364	+		Ga0059261_1926	0.21	+1.3
2,034,364	+		Ga0059261_1926	0.21	-1.4
2,034,364	+		Ga0059261_1926	0.21	-1.9
2,034,364	+		Ga0059261_1926	0.21	+0.2
2,034,364	+		Ga0059261_1926	0.21	+1.0
2,034,364	+		Ga0059261_1926	0.21	-0.7
2,034,364	+		Ga0059261_1926	0.21	+0.1
2,034,365	-		Ga0059261_1926	0.21	+2.3
2,034,365	-		Ga0059261_1926	0.21	-0.3
2,034,365	-		Ga0059261_1926	0.21	-0.6
2,034,365	-		Ga0059261_1926	0.21	-0.9
2,034,365	-		Ga0059261_1926	0.21	-1.4
2,034,365	-		Ga0059261_1926	0.21	-0.5
2,034,376	+		Ga0059261_1926	0.22	+1.5