Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1899

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,010,286	+		Ga0059261_1898	0.74	-1.9
2,010,286	+		Ga0059261_1898	0.74	+0.7
2,010,287	-		Ga0059261_1898	0.74	+0.4
2,010,287	-		Ga0059261_1898	0.74	-0.4
2,010,287	-		Ga0059261_1898	0.74	+0.7
2,010,287	-		Ga0059261_1898	0.74	-2.2
2,010,287	-		Ga0059261_1898	0.74	-1.2
2,010,287	-				+3.0
2,010,287	-		Ga0059261_1898	0.74	-1.0
2,010,304	+		Ga0059261_1898	0.75	-0.9
2,010,305	-		Ga0059261_1898	0.75	+0.7
2,010,395	+		Ga0059261_1898	0.78	+1.0
2,010,396	-		Ga0059261_1898	0.78	+0.0
2,010,396	-		Ga0059261_1898	0.78	+3.4
2,010,396	-				+2.0
2,010,397	+		Ga0059261_1898	0.78	-1.3
2,010,397	+		Ga0059261_1898	0.78	-0.3
2,010,397	+		Ga0059261_1898	0.78	+0.2
2,010,397	+		Ga0059261_1898	0.78	+1.4
2,010,397	+		Ga0059261_1898	0.78	-1.9
2,010,397	+		Ga0059261_1898	0.78	-0.1
2,010,397	+		Ga0059261_1898	0.78	-1.2
2,010,397	+		Ga0059261_1898	0.78	-1.0
2,010,397	+		Ga0059261_1898	0.78	-1.8
2,010,397	+		Ga0059261_1898	0.78	-0.1
2,010,397	+		Ga0059261_1898	0.78	+2.2
2,010,397	+		Ga0059261_1898	0.78	+0.3
2,010,397	+		Ga0059261_1898	0.78	+1.1
2,010,397	+		Ga0059261_1898	0.78	-0.7
2,010,397	+		Ga0059261_1898	0.78	-0.9
2,010,397	+		Ga0059261_1898	0.78	+0.7
2,010,397	+		Ga0059261_1898	0.78	+1.6
2,010,397	+		Ga0059261_1898	0.78	-0.5
2,010,397	+		Ga0059261_1898	0.78	+2.1
2,010,398	-				+1.4
2,010,398	-		Ga0059261_1898	0.78	+1.3
2,010,398	-		Ga0059261_1898	0.78	-1.2
2,010,398	-		Ga0059261_1898	0.78	-0.8
2,010,398	-		Ga0059261_1898	0.78	-0.3
2,010,398	-		Ga0059261_1898	0.78	-0.8
2,010,398	-		Ga0059261_1898	0.78	+1.1
2,010,398	-		Ga0059261_1898	0.78	+1.4
2,010,398	-		Ga0059261_1898	0.78	-0.5
2,010,398	-		Ga0059261_1898	0.78	+1.4
2,010,398	-		Ga0059261_1898	0.78	-0.7
2,010,451	+		Ga0059261_1898	0.80	-0.9
2,010,452	-		Ga0059261_1898	0.80	-0.7
2,010,452	-		Ga0059261_1898	0.80	-0.4
2,010,499	+		Ga0059261_1898	0.81	+0.4
2,010,577	+		Ga0059261_1898	0.84	-0.3
2,010,577	+		Ga0059261_1898	0.84	+1.6
2,010,577	+		Ga0059261_1898	0.84	+0.5
2,010,578	-		Ga0059261_1898	0.84	+0.3
2,010,578	-		Ga0059261_1898	0.84	-0.6
2,010,578	-		Ga0059261_1898	0.84	+1.0
2,010,578	-		Ga0059261_1898	0.84	+0.6
2,010,578	-		Ga0059261_1898	0.84	+0.3
2,010,724	+		Ga0059261_1898	0.89	-0.8
2,010,724	+		Ga0059261_1898	0.89	-0.4
2,010,724	+		Ga0059261_1898	0.89	-2.5
2,010,725	-		Ga0059261_1898	0.89	-1.2
2,010,725	-		Ga0059261_1898	0.89	-0.4
2,010,725	-		Ga0059261_1898	0.89	+1.6
2,010,818	+				+1.9
2,010,818	+				-0.6
2,010,818	+				+0.4
2,010,819	-				+2.1
2,010,819	-				-1.7
2,010,830	+				+0.0
2,010,830	+				+0.5
2,010,830	+				-0.5
2,010,845	+				+0.4
2,011,115	+				-1.2
2,011,246	+				-0.7
2,011,246	+				+1.3
2,011,290	+		Ga0059261_1899	0.11	-1.6
2,011,290	+		Ga0059261_1899	0.11	-0.5
2,011,290	+		Ga0059261_1899	0.11	-0.5
2,011,290	+		Ga0059261_1899	0.11	-0.8
2,011,290	+		Ga0059261_1899	0.11	+0.3
2,011,290	+		Ga0059261_1899	0.11	-0.8
2,011,290	+		Ga0059261_1899	0.11	+0.5
2,011,291	-		Ga0059261_1899	0.11	-0.6
2,011,291	-		Ga0059261_1899	0.11	-0.3
2,011,291	-		Ga0059261_1899	0.11	-1.0
2,011,291	-		Ga0059261_1899	0.11	+1.1
2,011,291	-		Ga0059261_1899	0.11	+2.6
2,011,291	-				+2.0
2,011,291	-		Ga0059261_1899	0.11	+1.4
2,011,291	-		Ga0059261_1899	0.11	+0.0
2,011,291	-		Ga0059261_1899	0.11	+0.9
2,011,292	+		Ga0059261_1899	0.11	-1.1
2,011,292	+		Ga0059261_1899	0.11	+1.4
2,011,292	+		Ga0059261_1899	0.11	-1.1
2,011,292	+		Ga0059261_1899	0.11	-3.1
2,011,292	+		Ga0059261_1899	0.11	-1.1
2,011,292	+		Ga0059261_1899	0.11	+0.4
2,011,292	+		Ga0059261_1899	0.11	+0.2
2,011,292	+		Ga0059261_1899	0.11	+0.7
2,011,293	-		Ga0059261_1899	0.12	-1.5
2,011,293	-		Ga0059261_1899	0.12	+1.3
2,011,293	-		Ga0059261_1899	0.12	+0.7
2,011,293	-		Ga0059261_1899	0.12	-1.0
2,011,722	+		Ga0059261_1899	0.61	-1.0
2,011,723	-		Ga0059261_1899	0.61	+0.5
2,011,723	-		Ga0059261_1899	0.61	-0.1
2,011,723	-		Ga0059261_1899	0.61	+0.7
2,011,757	+		Ga0059261_1899	0.64	-1.0
2,011,757	+		Ga0059261_1899	0.64	-1.6
2,011,757	+		Ga0059261_1899	0.64	+0.0
2,011,758	-		Ga0059261_1899	0.65	-0.6
2,011,758	-		Ga0059261_1899	0.65	-0.4
2,011,758	-		Ga0059261_1899	0.65	-0.4
2,011,812	-		Ga0059261_1899	0.71	+0.2
2,011,812	-		Ga0059261_1899	0.71	-1.9
2,012,097	+				+0.2
2,012,097	+				-0.3
2,012,222	-		Ga0059261_1900	0.17	-1.3
2,012,222	-		Ga0059261_1900	0.17	-0.4
2,012,382	+		Ga0059261_1900	0.38	-0.5
2,012,382	+		Ga0059261_1900	0.38	-1.1
2,012,382	+		Ga0059261_1900	0.38	-0.3
2,012,382	+		Ga0059261_1900	0.38	-0.5
2,012,382	+		Ga0059261_1900	0.38	+1.9
2,012,382	+		Ga0059261_1900	0.38	+0.0
2,012,382	+		Ga0059261_1900	0.38	-0.6
2,012,382	+		Ga0059261_1900	0.38	-2.9
2,012,383	-		Ga0059261_1900	0.38	+1.4
2,012,383	-		Ga0059261_1900	0.38	-0.7
2,012,383	-		Ga0059261_1900	0.38	-1.3
2,012,383	-		Ga0059261_1900	0.38	+0.5
2,012,383	-		Ga0059261_1900	0.38	+0.6
2,012,383	-		Ga0059261_1900	0.38	+1.4
2,012,676	-		Ga0059261_1900	0.77	+0.6
2,012,743	-		Ga0059261_1900	0.86	-0.2
2,012,753	+		Ga0059261_1900	0.87	-0.8
2,012,753	+		Ga0059261_1900	0.87	-2.1
2,012,753	+		Ga0059261_1900	0.87	-1.5
2,012,753	+		Ga0059261_1900	0.87	-0.8
2,012,754	-				+1.0
2,012,754	-		Ga0059261_1900	0.87	+2.5
2,012,754	-		Ga0059261_1900	0.87	-0.2
2,012,754	-		Ga0059261_1900	0.87	+1.7
2,012,754	-		Ga0059261_1900	0.87	-1.7
2,012,754	-		Ga0059261_1900	0.87	+0.7
2,012,850	+				+0.6
2,012,850	+				+2.0
2,012,850	+				+3.0
2,012,850	+				-0.6
2,012,850	+				+0.4
2,012,850	+				+0.2
2,012,850	+				-0.9
2,012,850	+				-1.1
2,012,850	+				-0.0
2,012,850	+				+0.5
2,012,850	+				-0.3
2,012,850	+				+1.1
2,012,850	+				+0.6
2,012,850	+				+0.7
2,012,850	+				+0.4
2,012,851	-				+0.6
2,012,851	-				+1.4
2,012,851	-				+0.6
2,012,851	-				+0.2
2,012,851	-				-1.4
2,012,851	-				-0.0
2,012,851	-				-0.5
2,012,851	-				+1.6
2,012,851	-				-0.4
2,012,851	-				+1.0
2,012,851	-				+0.6
2,012,851	-				-0.3
2,012,859	+				+0.8
2,012,860	-				-0.7