Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1578

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,648,216	+		Ga0059261_1577	0.42	+1.3
1,648,216	+		Ga0059261_1577	0.42	+2.5
1,648,216	+		Ga0059261_1577	0.42	-0.8
1,648,216	+		Ga0059261_1577	0.42	+0.5
1,648,216	+		Ga0059261_1577	0.42	+0.4
1,648,216	+		Ga0059261_1577	0.42	-0.5
1,648,217	-		Ga0059261_1577	0.42	-1.5
1,648,217	-		Ga0059261_1577	0.42	+0.4
1,648,217	-		Ga0059261_1577	0.42	+0.8
1,648,217	-		Ga0059261_1577	0.42	+1.3
1,648,217	-		Ga0059261_1577	0.42	-0.1
1,648,217	-		Ga0059261_1577	0.42	-1.1
1,648,217	-		Ga0059261_1577	0.42	+0.4
1,648,319	-		Ga0059261_1577	0.49	+0.0
1,648,319	-		Ga0059261_1577	0.49	+1.3
1,648,319	-		Ga0059261_1577	0.49	-0.3
1,648,435	+		Ga0059261_1577	0.57	+2.0
1,648,651	+		Ga0059261_1577	0.73	-1.4
1,648,651	+		Ga0059261_1577	0.73	+0.1
1,648,651	+		Ga0059261_1577	0.73	+0.3
1,648,693	+		Ga0059261_1577	0.76	+1.7
1,648,694	-		Ga0059261_1577	0.76	+0.0
1,648,694	-		Ga0059261_1577	0.76	+1.3
1,648,750	+				+1.9
1,648,750	+		Ga0059261_1577	0.80	+0.4
1,648,750	+		Ga0059261_1577	0.80	+1.7
1,648,750	+		Ga0059261_1577	0.80	+1.3
1,648,750	+		Ga0059261_1577	0.80	+1.1
1,648,750	+		Ga0059261_1577	0.80	-1.3
1,648,751	-		Ga0059261_1577	0.80	+0.1
1,648,751	-		Ga0059261_1577	0.80	+0.6
1,648,751	-		Ga0059261_1577	0.80	-0.7
1,648,751	-		Ga0059261_1577	0.80	-0.3
1,648,751	-		Ga0059261_1577	0.80	+0.2
1,648,751	-		Ga0059261_1577	0.80	+1.3
1,648,751	-		Ga0059261_1577	0.80	+0.1
1,648,751	-		Ga0059261_1577	0.80	-0.1
1,648,751	-		Ga0059261_1577	0.80	+2.4
1,648,751	-		Ga0059261_1577	0.80	-0.1
1,648,751	-		Ga0059261_1577	0.80	-0.3
1,648,751	-		Ga0059261_1577	0.80	+1.0
1,648,756	+		Ga0059261_1577	0.80	+1.5
1,648,756	+		Ga0059261_1577	0.80	+0.8
1,648,756	+		Ga0059261_1577	0.80	+0.5
1,648,756	+		Ga0059261_1577	0.80	+0.4
1,648,757	-		Ga0059261_1577	0.80	+1.0
1,648,757	-		Ga0059261_1577	0.80	-0.9
1,648,757	-		Ga0059261_1577	0.80	+1.6
1,648,757	-		Ga0059261_1577	0.80	+3.1
1,648,757	-		Ga0059261_1577	0.80	+0.9
1,648,757	-		Ga0059261_1577	0.80	+0.4
1,648,757	-		Ga0059261_1577	0.80	+0.3
1,648,757	-		Ga0059261_1577	0.80	+1.5
1,648,757	-		Ga0059261_1577	0.80	+0.2
1,648,757	-		Ga0059261_1577	0.80	+1.3
1,648,757	-		Ga0059261_1577	0.80	-1.2
1,648,757	-		Ga0059261_1577	0.80	+1.3
1,648,757	-		Ga0059261_1577	0.80	+1.1
1,648,762	+		Ga0059261_1577	0.81	+2.6
1,648,762	+		Ga0059261_1577	0.81	+2.9
1,648,804	+		Ga0059261_1577	0.84	+0.8
1,648,804	+		Ga0059261_1577	0.84	+0.9
1,648,805	-		Ga0059261_1577	0.84	+0.1
1,648,938	+				-0.6
1,648,962	-				+0.2
1,649,036	+				-0.0
1,649,036	+				+0.2
1,649,036	+				+1.6
1,649,036	+				+4.2
1,649,036	+				+0.8
1,649,036	+				-1.3
1,649,036	+				+2.9
1,649,037	-				+2.2
1,649,037	-				-0.4
1,649,037	-				+1.2
1,649,037	-				-0.0
1,649,037	-				+2.8
1,649,142	+				+1.1
1,649,260	-		Ga0059261_1578	0.19	+1.3
1,649,405	+		Ga0059261_1578	0.48	-2.7
1,649,405	+		Ga0059261_1578	0.48	+0.6
1,649,405	+		Ga0059261_1578	0.48	-1.1
1,649,405	+		Ga0059261_1578	0.48	-0.6
1,649,405	+		Ga0059261_1578	0.48	+2.7
1,649,406	-		Ga0059261_1578	0.48	-0.7
1,649,406	-		Ga0059261_1578	0.48	+1.0
1,649,406	-		Ga0059261_1578	0.48	+1.1
1,649,406	-		Ga0059261_1578	0.48	-0.6
1,649,499	+		Ga0059261_1578	0.66	+1.9
1,649,500	-		Ga0059261_1578	0.66	+3.5
1,649,500	-		Ga0059261_1578	0.66	+0.7
1,649,500	-		Ga0059261_1578	0.66	-1.7
1,649,500	-		Ga0059261_1578	0.66	-0.8
1,649,500	-				+0.6
1,649,568	-		Ga0059261_1578	0.80	-0.3
1,649,568	-		Ga0059261_1578	0.80	-0.1
1,649,601	+		Ga0059261_1578	0.86	+0.7
1,649,782	+				-0.2
1,649,782	+				-0.2
1,649,782	+				-0.9
1,649,782	+				+1.9
1,649,782	+				-2.0
1,649,782	+				-0.6
1,649,782	+				-0.8
1,649,782	+				+0.3
1,649,782	+				-0.3
1,649,783	-				-2.0
1,649,783	-				+1.8
1,649,783	-				-0.0
1,649,783	-				-0.7
1,649,783	-				-1.6
1,649,783	-				-1.2
1,649,783	-				+1.3
1,649,795	+				-0.2
1,649,796	-				-1.4
1,649,830	+				-0.4
1,649,830	+				-0.3
1,649,831	-				-1.9
1,649,831	-				+2.3
1,649,831	-				+0.3
1,649,845	+				-0.9
1,649,845	+				-0.8
1,649,845	+				-1.0
1,649,845	+				-0.5
1,649,845	+				-0.9
1,649,845	+				-0.8
1,649,846	-				-1.4
1,649,846	-				-0.3
1,649,846	-				-0.6
1,649,846	-				+0.6
1,649,846	-				+1.3
1,649,920	+		Ga0059261_1579	0.11	-1.1
1,649,920	+				+1.3
1,649,920	+		Ga0059261_1579	0.11	+2.5
1,649,920	+		Ga0059261_1579	0.11	-0.2
1,649,921	-		Ga0059261_1579	0.11	-1.9
1,649,921	-		Ga0059261_1579	0.11	-0.8
1,649,921	-		Ga0059261_1579	0.11	-1.2
1,649,962	+		Ga0059261_1579	0.13	-1.4
1,649,962	+		Ga0059261_1579	0.13	+1.4
1,649,962	+		Ga0059261_1579	0.13	-1.9
1,649,962	+		Ga0059261_1579	0.13	+1.5
1,649,962	+		Ga0059261_1579	0.13	-0.1
1,649,963	-		Ga0059261_1579	0.13	-0.4
1,650,052	+		Ga0059261_1579	0.18	+0.7
1,650,052	+		Ga0059261_1579	0.18	+0.0
1,650,052	+		Ga0059261_1579	0.18	-0.5
1,650,053	-		Ga0059261_1579	0.18	-0.4
1,650,053	-		Ga0059261_1579	0.18	-1.7
1,650,053	-		Ga0059261_1579	0.18	+0.9
1,650,053	-		Ga0059261_1579	0.18	+1.1
1,650,053	-		Ga0059261_1579	0.18	+3.9
1,650,053	-		Ga0059261_1579	0.18	-0.5
1,650,091	+		Ga0059261_1579	0.20	+1.9
1,650,091	+		Ga0059261_1579	0.20	-0.5
1,650,092	-		Ga0059261_1579	0.20	-0.3
1,650,092	-		Ga0059261_1579	0.20	-0.7
1,650,103	+		Ga0059261_1579	0.20	-0.3
1,650,103	+		Ga0059261_1579	0.20	-2.4
1,650,103	+		Ga0059261_1579	0.20	-0.3
1,650,103	+		Ga0059261_1579	0.20	+1.7
1,650,103	+		Ga0059261_1579	0.20	-0.1
1,650,104	-		Ga0059261_1579	0.20	-1.0
1,650,104	-		Ga0059261_1579	0.20	+0.2
1,650,104	-		Ga0059261_1579	0.20	+1.2
1,650,104	-		Ga0059261_1579	0.20	+3.0
1,650,104	-		Ga0059261_1579	0.20	-0.5
1,650,104	-		Ga0059261_1579	0.20	-0.0
1,650,135	+		Ga0059261_1579	0.22	+0.6
1,650,135	+		Ga0059261_1579	0.22	-1.0
1,650,135	+		Ga0059261_1579	0.22	-0.4
1,650,135	+		Ga0059261_1579	0.22	+0.7
1,650,136	-		Ga0059261_1579	0.22	-0.9
1,650,136	-		Ga0059261_1579	0.22	+0.9
1,650,136	-		Ga0059261_1579	0.22	+0.5
1,650,136	-		Ga0059261_1579	0.22	-0.4
1,650,136	-		Ga0059261_1579	0.22	+2.6
1,650,260	+		Ga0059261_1579	0.28	+0.3
1,650,260	+		Ga0059261_1579	0.28	-1.4
1,650,260	+				+1.3
1,650,260	+		Ga0059261_1579	0.28	-1.6
1,650,260	+		Ga0059261_1579	0.28	+0.1
1,650,260	+		Ga0059261_1579	0.28	-0.3
1,650,260	+		Ga0059261_1579	0.28	+0.3
1,650,260	+		Ga0059261_1579	0.28	+3.3
1,650,261	-		Ga0059261_1579	0.28	-1.4
1,650,261	-		Ga0059261_1579	0.28	+0.9
1,650,261	-		Ga0059261_1579	0.28	-2.0
1,650,261	-		Ga0059261_1579	0.28	-0.4
1,650,261	-		Ga0059261_1579	0.28	+3.0
1,650,261	-		Ga0059261_1579	0.28	+0.7
1,650,262	+		Ga0059261_1579	0.28	-1.8
1,650,262	+				+1.9
1,650,262	+		Ga0059261_1579	0.28	-0.6
1,650,262	+		Ga0059261_1579	0.28	-1.3
1,650,262	+		Ga0059261_1579	0.28	+0.9
1,650,262	+		Ga0059261_1579	0.28	+0.4
1,650,262	+		Ga0059261_1579	0.28	-0.3
1,650,262	+		Ga0059261_1579	0.28	+1.0
1,650,262	+		Ga0059261_1579	0.28	-0.8
1,650,262	+		Ga0059261_1579	0.28	-0.5
1,650,262	+		Ga0059261_1579	0.28	-0.4
1,650,262	+		Ga0059261_1579	0.28	+0.7
1,650,262	+		Ga0059261_1579	0.28	-0.9
1,650,262	+		Ga0059261_1579	0.28	-2.0
1,650,262	+		Ga0059261_1579	0.28	+0.1
1,650,262	+		Ga0059261_1579	0.28	-0.2
1,650,262	+		Ga0059261_1579	0.28	-0.5
1,650,262	+		Ga0059261_1579	0.28	-0.1
1,650,262	+		Ga0059261_1579	0.28	+0.1
1,650,262	+		Ga0059261_1579	0.28	+1.5
1,650,262	+		Ga0059261_1579	0.28	+1.4
1,650,262	+		Ga0059261_1579	0.28	+3.3
1,650,262	+		Ga0059261_1579	0.28	+3.7
1,650,262	+		Ga0059261_1579	0.28	+0.1
1,650,262	+		Ga0059261_1579	0.28	-0.8
1,650,262	+				+0.1
1,650,262	+		Ga0059261_1579	0.28	-1.3
1,650,263	-		Ga0059261_1579	0.28	+0.9
1,650,263	-				+1.9
1,650,263	-		Ga0059261_1579	0.28	-1.6
1,650,263	-		Ga0059261_1579	0.28	+0.6
1,650,263	-		Ga0059261_1579	0.28	+0.3
1,650,263	-		Ga0059261_1579	0.28	-0.5
1,650,263	-		Ga0059261_1579	0.28	-0.1
1,650,263	-		Ga0059261_1579	0.28	+0.1
1,650,263	-		Ga0059261_1579	0.28	-1.4
1,650,263	-		Ga0059261_1579	0.28	-1.7
1,650,263	-		Ga0059261_1579	0.28	-0.1
1,650,263	-		Ga0059261_1579	0.28	-0.5
1,650,263	-		Ga0059261_1579	0.28	-1.5
1,650,263	-		Ga0059261_1579	0.28	+2.3
1,650,263	-		Ga0059261_1579	0.28	-1.5
1,650,263	-		Ga0059261_1579	0.28	-1.0
1,650,305	-		Ga0059261_1579	0.30	+1.8
1,650,305	-		Ga0059261_1579	0.30	-0.8
1,650,323	+		Ga0059261_1579	0.31	-0.9
1,650,324	-		Ga0059261_1579	0.31	-0.8
1,650,481	+		Ga0059261_1579	0.39	-0.1
1,650,481	+		Ga0059261_1579	0.39	+0.2
1,650,481	+		Ga0059261_1579	0.39	-0.3
1,650,481	+		Ga0059261_1579	0.39	+3.5
1,650,481	+		Ga0059261_1579	0.39	+0.4
1,650,481	+		Ga0059261_1579	0.39	+0.9
1,650,481	+		Ga0059261_1579	0.39	-1.2
1,650,481	+		Ga0059261_1579	0.39	+1.9
1,650,482	-		Ga0059261_1579	0.39	+3.2
1,650,482	-		Ga0059261_1579	0.39	-1.5
1,650,482	-		Ga0059261_1579	0.39	-0.9
1,650,482	-		Ga0059261_1579	0.39	+0.9
1,650,482	-		Ga0059261_1579	0.39	+0.3
1,650,482	-		Ga0059261_1579	0.39	-0.0
1,650,482	-		Ga0059261_1579	0.39	+0.2
1,650,482	-		Ga0059261_1579	0.39	-0.1
1,650,550	+		Ga0059261_1579	0.42	-1.2
1,650,550	+		Ga0059261_1579	0.42	+0.7
1,650,551	-		Ga0059261_1579	0.42	+3.9
1,650,614	-		Ga0059261_1579	0.45	-0.8