Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20505

Experiment: Cytidine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (C)
4,575,534	+		AO356_20500	0.22	+1.2
4,575,537	+		AO356_20500	0.23	+0.2
4,575,537	+		AO356_20500	0.23	-1.3
4,575,586	+		AO356_20500	0.28	-0.2
4,575,671	+		AO356_20500	0.38	-0.1
4,575,686	-		AO356_20500	0.40	-0.1
4,575,703	-		AO356_20500	0.42	+0.6
4,575,762	+		AO356_20500	0.49	+0.7
4,575,847	-		AO356_20500	0.59	-0.5
4,575,852	+		AO356_20500	0.60	+0.0
4,575,853	-		AO356_20500	0.60	-0.3
4,575,853	-		AO356_20500	0.60	+1.1
4,575,853	-		AO356_20500	0.60	-0.5
4,575,855	-		AO356_20500	0.60	+0.3
4,575,898	+		AO356_20500	0.65	-0.5
4,575,899	-		AO356_20500	0.65	-0.5
4,575,899	-		AO356_20500	0.65	-0.3
4,575,910	+		AO356_20500	0.66	-0.8
4,575,910	+		AO356_20500	0.66	+0.2
4,575,911	-		AO356_20500	0.66	-0.4
4,575,932	+		AO356_20500	0.69	+0.3
4,575,932	+		AO356_20500	0.69	-0.1
4,575,932	+		AO356_20500	0.69	+0.1
4,575,933	-		AO356_20500	0.69	+0.2
4,575,933	-		AO356_20500	0.69	+0.1
4,575,933	-		AO356_20500	0.69	-1.1
4,575,933	-		AO356_20500	0.69	-0.6
4,575,946	+		AO356_20500	0.71	+0.6
4,575,947	-		AO356_20500	0.71	+1.0
4,575,947	-		AO356_20500	0.71	+0.6
4,575,958	+		AO356_20500	0.72	-1.9
4,575,959	-		AO356_20500	0.72	+0.1
4,576,072	-		AO356_20500	0.85	-0.2
4,576,082	-		AO356_20500	0.86	+1.1
4,576,082	-		AO356_20500	0.86	+0.5
4,576,117	-				-0.0
4,576,117	-				+0.2
4,576,117	-				+1.5
4,576,195	+				+0.5
4,576,195	+				+0.5
4,576,195	+				-0.0
4,576,196	-				-0.5
4,576,200	+				+0.4
4,576,246	+				+0.1
4,576,298	-				+0.0
4,576,320	+				+0.3
4,576,355	+				-0.3
4,576,457	+				+0.2
4,576,457	+				+0.1
4,576,458	-				+0.4
4,576,500	+				+0.4
4,576,500	+				-0.4
4,576,500	+				+0.1
4,576,500	+				+0.3
4,576,500	+				-1.0
4,576,500	+				-0.2
4,576,500	+				+0.3
4,576,501	-				+0.2
4,576,501	-				-0.0
4,576,501	-				-1.1
4,576,501	-				-0.2
4,576,501	-				-0.3
4,576,501	-				-0.3
4,576,504	+				-0.1
4,576,504	+				+1.1
4,576,504	+				+0.6
4,576,504	+				-1.5
4,576,504	+				+0.1
4,576,505	-				-1.0
4,576,505	-				-0.0
4,576,505	-				+0.6
4,576,505	-				+0.3
4,576,511	-				+0.3
4,576,520	+				+0.4
4,576,520	+				-0.5
4,576,521	-				-0.6
4,576,521	-				-0.6
4,576,617	+		AO356_20505	0.20	+0.3
4,576,617	+		AO356_20505	0.20	-0.4
4,576,617	+		AO356_20505	0.20	-0.9
4,576,617	+		AO356_20505	0.20	+0.1
4,576,617	+		AO356_20505	0.20	-0.7
4,576,618	-		AO356_20505	0.21	+0.6
4,576,619	+		AO356_20505	0.21	+0.1
4,576,620	-		AO356_20505	0.21	+0.0
4,576,620	-		AO356_20505	0.21	-2.5
4,576,690	-		AO356_20505	0.33	-0.3
4,576,757	+		AO356_20505	0.45	-0.1
4,576,773	+		AO356_20505	0.48	-0.3
4,576,773	+		AO356_20505	0.48	-0.2
4,576,834	-		AO356_20505	0.59	+0.3
4,576,871	+		AO356_20505	0.65	+0.2
4,576,871	+		AO356_20505	0.65	-2.8
4,576,872	-		AO356_20505	0.65	-0.8
4,576,931	+		AO356_20505	0.76	-1.6
4,576,984	+		AO356_20505	0.85	+0.9
4,576,985	-		AO356_20505	0.85	-1.4
4,576,987	-		AO356_20505	0.86	+0.1
4,577,026	+				-0.5
4,577,027	-				-0.5
4,577,027	-				-0.1
4,577,104	-				-0.3
4,577,148	+				+0.9
4,577,149	-				+1.5
4,577,149	-				-0.2
4,577,149	-				+0.2
4,577,149	-				+0.5
4,577,210	+				-0.2
4,577,227	+				+0.5
4,577,227	+				-0.7
4,577,227	+				-1.6
4,577,228	-				+0.5
4,577,228	-				+0.1
4,577,228	-				-0.0
4,577,228	-				-0.5
4,577,228	-				+1.2
4,577,234	+				-1.3
4,577,234	+				+0.9
4,577,234	+				-0.7
4,577,234	+				+0.6
4,577,235	-				+0.3
4,577,254	-				-0.5
4,577,254	-				-0.3
4,577,256	-				+0.1
4,577,286	+				+0.2
4,577,287	-				-0.6
4,577,287	-				-1.5
4,577,294	+				+0.4
4,577,294	+				+0.9
4,577,294	+				-0.2
4,577,295	-				-0.4
4,577,295	-				+1.4
4,577,295	-				+0.0
4,577,309	+				+0.4
4,577,309	+				+0.4
4,577,309	+				-0.3
4,577,309	+				-0.4
4,577,310	-				+0.8
4,577,310	-				-0.7
4,577,310	-				+0.6
4,577,350	+				+0.5
4,577,350	+				+0.1
4,577,351	-				-0.1
4,577,560	+		AO356_20510	0.26	+0.5
4,577,561	-		AO356_20510	0.26	+0.3
4,577,561	-		AO356_20510	0.26	-0.1
4,577,565	+		AO356_20510	0.27	+0.2
4,577,565	+		AO356_20510	0.27	-1.0
4,577,566	-		AO356_20510	0.27	-0.2
4,577,566	-		AO356_20510	0.27	-0.5
4,577,566	-		AO356_20510	0.27	-0.1
4,577,566	-		AO356_20510	0.27	+1.4
4,577,566	-		AO356_20510	0.27	+0.2
4,577,623	+		AO356_20510	0.33	+0.1
4,577,623	+		AO356_20510	0.33	-0.3
4,577,623	+		AO356_20510	0.33	-0.6
4,577,623	+		AO356_20510	0.33	+0.2
4,577,623	+		AO356_20510	0.33	+0.3
4,577,624	-		AO356_20510	0.34	+1.2
4,577,624	-		AO356_20510	0.34	+0.7
4,577,695	+		AO356_20510	0.42	+0.3
4,577,695	+		AO356_20510	0.42	-0.3
4,577,696	-		AO356_20510	0.42	+0.1
4,577,736	+		AO356_20510	0.47	-0.3
4,577,737	-		AO356_20510	0.47	+0.6
4,577,737	-		AO356_20510	0.47	+0.3
4,577,759	+		AO356_20510	0.49	+0.1
4,577,860	+		AO356_20510	0.61	+0.8
4,577,860	+		AO356_20510	0.61	+1.9
4,577,860	+		AO356_20510	0.61	+0.9
4,577,861	-		AO356_20510	0.61	-0.3
4,577,861	-		AO356_20510	0.61	+0.4
4,577,874	+		AO356_20510	0.63	-0.1
4,577,875	-		AO356_20510	0.63	+1.7
4,577,878	+		AO356_20510	0.63	-0.7
4,577,878	+		AO356_20510	0.63	-0.0
4,577,878	+		AO356_20510	0.63	+0.1
4,577,878	+		AO356_20510	0.63	+0.6
4,577,878	+		AO356_20510	0.63	+0.3
4,577,879	-		AO356_20510	0.63	-0.4
4,577,879	-		AO356_20510	0.63	+0.0
4,577,879	-		AO356_20510	0.63	+0.1
4,577,879	-		AO356_20510	0.63	+0.1
4,577,879	-		AO356_20510	0.63	+0.1
4,577,879	-		AO356_20510	0.63	+1.0
4,577,879	-		AO356_20510	0.63	+0.9
4,577,879	-		AO356_20510	0.63	+0.0