Experiment: MoYLS4 no iron with 2,2' dipyridyl 20uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3344 and DORF24435 are separated by 77 nucleotides DORF24435 and DVU3347 are separated by 312 nucleotides DVU3347 and DVU3348 overlap by 1 nucleotides
DVU3344: DVU3344 - hypothetical protein (TIGR), at 3,517,416 to 3,518,585
DVU3344
DORF24435: DORF24435 - SEED: Sll1863 protein, at 3,518,663 to 3,518,953
DORF24435
DVU3347: DVU3347 - pyruvate ferredoxin/flavodoxin oxidoreductase family protein (TIGR), at 3,519,266 to 3,519,814
DVU3347
DVU3348: DVU3348 - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit, putative (TIGR), at 3,519,814 to 3,520,596
DVU3348
Position (kb)
3518
3519 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3517.670 kb on + strand, within DVU3344 at 3517.670 kb on + strand, within DVU3344 at 3517.670 kb on + strand, within DVU3344 at 3517.690 kb on - strand, within DVU3344 at 3517.754 kb on + strand, within DVU3344 at 3517.764 kb on - strand, within DVU3344 at 3517.765 kb on + strand, within DVU3344 at 3517.788 kb on - strand, within DVU3344 at 3517.788 kb on - strand, within DVU3344 at 3517.803 kb on + strand, within DVU3344 at 3517.806 kb on - strand, within DVU3344 at 3517.813 kb on + strand, within DVU3344 at 3517.832 kb on + strand, within DVU3344 at 3517.832 kb on + strand, within DVU3344 at 3517.859 kb on - strand, within DVU3344 at 3517.859 kb on - strand, within DVU3344 at 3517.862 kb on + strand, within DVU3344 at 3517.977 kb on + strand, within DVU3344 at 3517.987 kb on + strand, within DVU3344 at 3517.992 kb on + strand, within DVU3344 at 3518.025 kb on + strand, within DVU3344 at 3518.092 kb on + strand, within DVU3344 at 3518.136 kb on - strand, within DVU3344 at 3518.171 kb on - strand, within DVU3344 at 3518.211 kb on + strand, within DVU3344 at 3518.224 kb on + strand, within DVU3344 at 3518.278 kb on - strand, within DVU3344 at 3518.278 kb on - strand, within DVU3344 at 3518.332 kb on - strand, within DVU3344 at 3518.382 kb on + strand, within DVU3344 at 3518.435 kb on + strand, within DVU3344 at 3518.506 kb on + strand at 3518.550 kb on + strand at 3518.573 kb on + strand at 3518.581 kb on - strand at 3518.605 kb on - strand at 3518.639 kb on - strand at 3518.669 kb on + strand at 3518.720 kb on - strand, within DORF24435 at 3518.853 kb on + strand, within DORF24435 at 3518.853 kb on + strand, within DORF24435 at 3518.982 kb on - strand at 3519.057 kb on - strand at 3519.107 kb on + strand at 3519.129 kb on + strand at 3519.191 kb on - strand at 3519.225 kb on - strand at 3519.249 kb on + strand at 3519.249 kb on + strand at 3519.257 kb on - strand at 3519.257 kb on - strand at 3519.561 kb on + strand, within DVU3347 at 3519.842 kb on + strand at 3519.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 no iron with 2,2' dipyridyl 20uM remove 3,517,670 + DVU3344 0.22 -0.4 3,517,670 + DVU3344 0.22 -0.4 3,517,670 + DVU3344 0.22 -0.4 3,517,690 - DVU3344 0.23 +0.9 3,517,754 + DVU3344 0.29 +0.5 3,517,764 - DVU3344 0.30 +0.5 3,517,765 + DVU3344 0.30 -0.8 3,517,788 - DVU3344 0.32 -0.3 3,517,788 - DVU3344 0.32 -0.1 3,517,803 + DVU3344 0.33 -0.3 3,517,806 - DVU3344 0.33 -0.0 3,517,813 + DVU3344 0.34 +0.5 3,517,832 + DVU3344 0.36 -0.3 3,517,832 + DVU3344 0.36 -0.6 3,517,859 - DVU3344 0.38 -1.5 3,517,859 - DVU3344 0.38 -0.6 3,517,862 + DVU3344 0.38 -0.4 3,517,977 + DVU3344 0.48 -0.3 3,517,987 + DVU3344 0.49 -0.2 3,517,992 + DVU3344 0.49 -0.0 3,518,025 + DVU3344 0.52 -0.4 3,518,092 + DVU3344 0.58 +2.2 3,518,136 - DVU3344 0.62 -0.7 3,518,171 - DVU3344 0.65 -0.8 3,518,211 + DVU3344 0.68 +0.5 3,518,224 + DVU3344 0.69 -0.1 3,518,278 - DVU3344 0.74 -0.2 3,518,278 - DVU3344 0.74 +1.0 3,518,332 - DVU3344 0.78 -0.5 3,518,382 + DVU3344 0.83 -0.4 3,518,435 + DVU3344 0.87 +3.1 3,518,506 + +0.0 3,518,550 + -0.0 3,518,573 + +0.5 3,518,581 - -0.4 3,518,605 - -0.3 3,518,639 - -1.4 3,518,669 + -1.8 3,518,720 - DORF24435 0.20 -0.8 3,518,853 + DORF24435 0.65 -0.5 3,518,853 + DORF24435 0.65 -0.4 3,518,982 - -0.3 3,519,057 - -0.3 3,519,107 + +0.2 3,519,129 + -0.7 3,519,191 - -0.3 3,519,225 - -0.8 3,519,249 + -0.3 3,519,249 + -0.6 3,519,257 - +1.2 3,519,257 - +0.2 3,519,561 + DVU3347 0.54 -0.0 3,519,842 + +0.2 3,519,850 - -0.5
Or see this region's nucleotide sequence