Experiment: MoYLS4 no iron with 2,2' dipyridyl 20uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1737 and DORF13021 are separated by 2 nucleotides DORF13021 and DVU1738 overlap by 23 nucleotides DVU1738 and DORF37060 are separated by 83 nucleotides DORF37060 and DVU1740 are separated by 14 nucleotides DVU1740 and DVU1741 overlap by 4 nucleotides
DVU1737: DVU1737 - conserved hypothetical protein (TIGR), at 1,806,390 to 1,806,608
DVU1737
DORF13021: DORF13021 - no description, at 1,806,611 to 1,806,808
DORF13021
DVU1738: DVU1738 - site-specific recombinase, phage integrase family (TIGR), at 1,806,786 to 1,807,430
DVU1738
DORF37060: DORF37060 - no description, at 1,807,514 to 1,808,563
DORF37060
DVU1740: DVU1740 - hypothetical protein (TIGR), at 1,808,578 to 1,808,979
DVU1740
DVU1741: DVU1741 - hypothetical protein (TIGR), at 1,808,976 to 1,809,947
DVU1741
Position (kb)
1807
1808
1809 Strain fitness (log2 ratio)
-2
-1
0
1 at 1806.558 kb on - strand, within DVU1737 at 1806.583 kb on - strand, within DVU1737 at 1806.587 kb on - strand at 1806.659 kb on + strand, within DORF13021 at 1806.784 kb on + strand, within DORF13021 at 1806.790 kb on - strand at 1806.912 kb on - strand, within DVU1738 at 1806.924 kb on + strand, within DVU1738 at 1806.927 kb on + strand, within DVU1738 at 1806.966 kb on + strand, within DVU1738 at 1806.988 kb on + strand, within DVU1738 at 1806.989 kb on - strand, within DVU1738 at 1806.996 kb on - strand, within DVU1738 at 1806.998 kb on + strand, within DVU1738 at 1807.000 kb on + strand, within DVU1738 at 1807.006 kb on - strand, within DVU1738 at 1807.006 kb on - strand, within DVU1738 at 1807.006 kb on - strand, within DVU1738 at 1807.121 kb on + strand, within DVU1738 at 1807.256 kb on + strand, within DVU1738 at 1807.256 kb on + strand, within DVU1738 at 1807.264 kb on - strand, within DVU1738 at 1807.264 kb on - strand, within DVU1738 at 1807.319 kb on - strand, within DVU1738 at 1807.520 kb on - strand at 1807.683 kb on - strand, within DORF37060 at 1807.733 kb on - strand, within DORF37060 at 1807.742 kb on - strand, within DORF37060 at 1807.777 kb on + strand, within DORF37060 at 1808.225 kb on - strand, within DORF37060 at 1808.294 kb on + strand, within DORF37060 at 1808.356 kb on - strand, within DORF37060 at 1808.361 kb on - strand, within DORF37060 at 1808.414 kb on - strand, within DORF37060 at 1808.425 kb on - strand, within DORF37060 at 1808.470 kb on + strand at 1808.558 kb on + strand at 1808.608 kb on + strand at 1808.608 kb on + strand at 1808.613 kb on + strand at 1808.788 kb on - strand, within DVU1740 at 1808.798 kb on + strand, within DVU1740 at 1808.812 kb on - strand, within DVU1740 at 1808.844 kb on - strand, within DVU1740 at 1808.844 kb on - strand, within DVU1740 at 1808.863 kb on + strand, within DVU1740 at 1808.906 kb on + strand, within DVU1740 at 1808.911 kb on + strand, within DVU1740 at 1808.929 kb on - strand, within DVU1740 at 1808.934 kb on - strand, within DVU1740 at 1808.964 kb on + strand at 1809.160 kb on - strand, within DVU1741 at 1809.187 kb on - strand, within DVU1741 at 1809.204 kb on + strand, within DVU1741 at 1809.212 kb on - strand, within DVU1741 at 1809.241 kb on - strand, within DVU1741 at 1809.322 kb on + strand, within DVU1741 at 1809.332 kb on + strand, within DVU1741 at 1809.341 kb on + strand, within DVU1741 at 1809.350 kb on + strand, within DVU1741 at 1809.369 kb on + strand, within DVU1741 at 1809.386 kb on + strand, within DVU1741 at 1809.399 kb on - strand, within DVU1741 at 1809.419 kb on + strand, within DVU1741 at 1809.427 kb on - strand, within DVU1741 at 1809.454 kb on + strand, within DVU1741 at 1809.454 kb on + strand, within DVU1741 at 1809.475 kb on - strand, within DVU1741 at 1809.551 kb on - strand, within DVU1741
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 no iron with 2,2' dipyridyl 20uM remove 1,806,558 - DVU1737 0.77 -0.3 1,806,583 - DVU1737 0.88 -0.1 1,806,587 - -0.6 1,806,659 + DORF13021 0.24 -0.3 1,806,784 + DORF13021 0.87 +0.4 1,806,790 - -1.2 1,806,912 - DVU1738 0.20 -0.1 1,806,924 + DVU1738 0.21 -0.4 1,806,927 + DVU1738 0.22 -0.3 1,806,966 + DVU1738 0.28 -0.8 1,806,988 + DVU1738 0.31 -0.0 1,806,989 - DVU1738 0.31 +0.0 1,806,996 - DVU1738 0.33 -0.4 1,806,998 + DVU1738 0.33 -1.4 1,807,000 + DVU1738 0.33 +0.3 1,807,006 - DVU1738 0.34 -2.0 1,807,006 - DVU1738 0.34 -0.3 1,807,006 - DVU1738 0.34 -0.2 1,807,121 + DVU1738 0.52 -0.4 1,807,256 + DVU1738 0.73 -0.8 1,807,256 + DVU1738 0.73 -0.2 1,807,264 - DVU1738 0.74 -0.2 1,807,264 - DVU1738 0.74 -0.2 1,807,319 - DVU1738 0.83 +0.8 1,807,520 - -0.5 1,807,683 - DORF37060 0.16 -0.6 1,807,733 - DORF37060 0.21 +0.5 1,807,742 - DORF37060 0.22 -0.4 1,807,777 + DORF37060 0.25 -0.3 1,808,225 - DORF37060 0.68 +0.2 1,808,294 + DORF37060 0.74 -0.4 1,808,356 - DORF37060 0.80 -0.4 1,808,361 - DORF37060 0.81 -1.0 1,808,414 - DORF37060 0.86 +0.2 1,808,425 - DORF37060 0.87 -0.5 1,808,470 + +0.1 1,808,558 + +0.2 1,808,608 + +0.2 1,808,608 + +0.7 1,808,613 + +0.8 1,808,788 - DVU1740 0.52 -0.4 1,808,798 + DVU1740 0.55 +1.3 1,808,812 - DVU1740 0.58 +0.6 1,808,844 - DVU1740 0.66 -0.1 1,808,844 - DVU1740 0.66 -0.5 1,808,863 + DVU1740 0.71 +0.0 1,808,906 + DVU1740 0.82 -1.3 1,808,911 + DVU1740 0.83 -0.3 1,808,929 - DVU1740 0.87 -0.4 1,808,934 - DVU1740 0.89 -0.2 1,808,964 + -1.4 1,809,160 - DVU1741 0.19 +1.2 1,809,187 - DVU1741 0.22 +1.2 1,809,204 + DVU1741 0.23 -0.6 1,809,212 - DVU1741 0.24 +0.3 1,809,241 - DVU1741 0.27 -0.1 1,809,322 + DVU1741 0.36 -0.2 1,809,332 + DVU1741 0.37 +0.6 1,809,341 + DVU1741 0.38 -0.5 1,809,350 + DVU1741 0.38 -0.3 1,809,369 + DVU1741 0.40 +0.3 1,809,386 + DVU1741 0.42 +0.1 1,809,399 - DVU1741 0.44 -0.3 1,809,419 + DVU1741 0.46 -0.5 1,809,427 - DVU1741 0.46 -0.3 1,809,454 + DVU1741 0.49 -0.1 1,809,454 + DVU1741 0.49 -0.4 1,809,475 - DVU1741 0.51 +1.6 1,809,551 - DVU1741 0.59 +0.1
Or see this region's nucleotide sequence