Experiment: sodium iodate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_840 and Pf6N2E2_841 are separated by 10 nucleotides Pf6N2E2_841 and Pf6N2E2_842 are separated by 365 nucleotides Pf6N2E2_842 and Pf6N2E2_843 overlap by 4 nucleotides
Pf6N2E2_840 - Alcohol dehydrogenase (EC 1.1.1.1), at 985,335 to 986,321
_840
Pf6N2E2_841 - hypothetical protein, at 986,332 to 986,493
_841
Pf6N2E2_842 - Haloacid dehalogenase, type II (EC 3.8.1.2), at 986,859 to 987,566
_842
Pf6N2E2_843 - Phosphoglycolate phosphatase, archaeal type (EC 3.1.3.18), at 987,563 to 989,320
_843
Position (kb) 986
987
988 Strain fitness (log2 ratio) -2
-1
0
1
2 at 985.882 kb on + strand, within Pf6N2E2_840 at 985.882 kb on + strand, within Pf6N2E2_840 at 985.882 kb on + strand, within Pf6N2E2_840 at 985.883 kb on - strand, within Pf6N2E2_840 at 986.459 kb on + strand, within Pf6N2E2_841 at 986.459 kb on + strand, within Pf6N2E2_841 at 986.460 kb on - strand, within Pf6N2E2_841 at 986.491 kb on + strand at 986.491 kb on + strand at 986.491 kb on + strand at 986.491 kb on + strand at 986.505 kb on + strand at 986.505 kb on + strand at 986.505 kb on + strand at 986.505 kb on + strand at 986.506 kb on - strand at 986.594 kb on + strand at 986.594 kb on + strand at 986.598 kb on + strand at 986.599 kb on - strand at 986.599 kb on - strand at 986.735 kb on + strand at 986.735 kb on + strand at 986.735 kb on + strand at 986.735 kb on + strand at 986.735 kb on + strand at 986.736 kb on - strand at 986.737 kb on + strand at 986.737 kb on + strand at 986.774 kb on - strand at 986.779 kb on + strand at 986.779 kb on + strand at 986.779 kb on + strand at 986.779 kb on + strand at 986.780 kb on - strand at 986.837 kb on + strand at 986.837 kb on + strand at 986.837 kb on + strand at 986.837 kb on + strand at 986.838 kb on - strand at 986.838 kb on - strand at 986.838 kb on - strand at 986.838 kb on - strand at 986.841 kb on + strand at 986.841 kb on + strand at 986.842 kb on - strand at 987.006 kb on + strand, within Pf6N2E2_842 at 987.006 kb on + strand, within Pf6N2E2_842 at 987.006 kb on + strand, within Pf6N2E2_842 at 987.006 kb on + strand, within Pf6N2E2_842 at 987.007 kb on - strand, within Pf6N2E2_842 at 987.102 kb on + strand, within Pf6N2E2_842 at 987.103 kb on - strand, within Pf6N2E2_842 at 987.222 kb on - strand, within Pf6N2E2_842 at 987.328 kb on - strand, within Pf6N2E2_842 at 987.348 kb on + strand, within Pf6N2E2_842 at 987.348 kb on + strand, within Pf6N2E2_842 at 987.349 kb on - strand, within Pf6N2E2_842 at 987.349 kb on - strand, within Pf6N2E2_842 at 987.456 kb on + strand, within Pf6N2E2_842 at 987.456 kb on + strand, within Pf6N2E2_842 at 987.456 kb on + strand, within Pf6N2E2_842 at 987.457 kb on - strand, within Pf6N2E2_842 at 987.457 kb on - strand, within Pf6N2E2_842 at 987.457 kb on - strand, within Pf6N2E2_842 at 987.478 kb on - strand, within Pf6N2E2_842 at 987.557 kb on + strand at 987.557 kb on + strand at 987.557 kb on + strand at 987.558 kb on - strand at 987.558 kb on - strand at 987.558 kb on - strand at 987.558 kb on - strand at 987.558 kb on - strand at 987.558 kb on - strand at 987.564 kb on + strand at 987.564 kb on + strand at 987.564 kb on + strand at 987.565 kb on - strand at 987.565 kb on - strand at 987.565 kb on - strand at 987.565 kb on - strand at 987.565 kb on - strand at 987.565 kb on - strand at 987.733 kb on + strand at 987.734 kb on - strand at 987.734 kb on - strand at 987.734 kb on - strand at 987.734 kb on - strand at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.796 kb on + strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.797 kb on - strand, within Pf6N2E2_843 at 987.906 kb on - strand, within Pf6N2E2_843 at 987.906 kb on - strand, within Pf6N2E2_843 at 987.921 kb on + strand, within Pf6N2E2_843 at 987.921 kb on + strand, within Pf6N2E2_843 at 987.922 kb on - strand, within Pf6N2E2_843 at 987.922 kb on - strand, within Pf6N2E2_843 at 987.922 kb on - strand, within Pf6N2E2_843 at 987.922 kb on - strand, within Pf6N2E2_843 at 987.922 kb on - strand, within Pf6N2E2_843 at 987.922 kb on - strand, within Pf6N2E2_843 at 987.995 kb on + strand, within Pf6N2E2_843 at 987.995 kb on + strand, within Pf6N2E2_843 at 987.995 kb on + strand, within Pf6N2E2_843 at 987.996 kb on - strand, within Pf6N2E2_843 at 987.996 kb on - strand, within Pf6N2E2_843 at 987.996 kb on - strand, within Pf6N2E2_843 at 987.996 kb on - strand, within Pf6N2E2_843 at 987.997 kb on + strand, within Pf6N2E2_843 at 987.997 kb on + strand, within Pf6N2E2_843 at 987.998 kb on - strand, within Pf6N2E2_843 at 988.061 kb on + strand, within Pf6N2E2_843 at 988.061 kb on + strand, within Pf6N2E2_843 at 988.061 kb on + strand, within Pf6N2E2_843 at 988.061 kb on + strand, within Pf6N2E2_843 at 988.062 kb on - strand, within Pf6N2E2_843 at 988.062 kb on - strand, within Pf6N2E2_843 at 988.149 kb on - strand, within Pf6N2E2_843 at 988.233 kb on + strand, within Pf6N2E2_843 at 988.233 kb on + strand, within Pf6N2E2_843 at 988.233 kb on + strand, within Pf6N2E2_843 at 988.233 kb on + strand, within Pf6N2E2_843 at 988.234 kb on - strand, within Pf6N2E2_843 at 988.304 kb on + strand, within Pf6N2E2_843 at 988.305 kb on - strand, within Pf6N2E2_843 at 988.367 kb on - strand, within Pf6N2E2_843 at 988.379 kb on + strand, within Pf6N2E2_843 at 988.380 kb on - strand, within Pf6N2E2_843 at 988.458 kb on + strand, within Pf6N2E2_843
Per-strain Table
Position Strand Gene LocusTag Fraction sodium iodate 0.005 M remove 985,882 + Pf6N2E2_840 0.55 +1.1 985,882 + Pf6N2E2_840 0.55 -0.1 985,882 + Pf6N2E2_840 0.55 +0.5 985,883 - Pf6N2E2_840 0.56 -0.3 986,459 + Pf6N2E2_841 0.78 -0.2 986,459 + Pf6N2E2_841 0.78 -0.1 986,460 - Pf6N2E2_841 0.79 +0.3 986,491 + +0.0 986,491 + -1.6 986,491 + +0.9 986,491 + -0.9 986,505 + -1.3 986,505 + -0.7 986,505 + +1.4 986,505 + -0.2 986,506 - +0.8 986,594 + -1.1 986,594 + -0.1 986,598 + -0.7 986,599 - -2.2 986,599 - -0.9 986,735 + +0.1 986,735 + +1.1 986,735 + +0.7 986,735 + -0.4 986,735 + +0.3 986,736 - +0.0 986,737 + +0.3 986,737 + -0.4 986,774 - +0.3 986,779 + -0.1 986,779 + -1.3 986,779 + +1.2 986,779 + -1.3 986,780 - +2.5 986,837 + +0.4 986,837 + +1.4 986,837 + -2.4 986,837 + +0.6 986,838 - -1.1 986,838 - +1.6 986,838 - +0.6 986,838 - +0.3 986,841 + +0.1 986,841 + +0.5 986,842 - +1.3 987,006 + Pf6N2E2_842 0.21 +0.9 987,006 + Pf6N2E2_842 0.21 +0.7 987,006 + Pf6N2E2_842 0.21 -0.1 987,006 + Pf6N2E2_842 0.21 +0.2 987,007 - Pf6N2E2_842 0.21 +1.1 987,102 + Pf6N2E2_842 0.34 -0.0 987,103 - Pf6N2E2_842 0.34 -0.4 987,222 - Pf6N2E2_842 0.51 +0.5 987,328 - Pf6N2E2_842 0.66 +1.0 987,348 + Pf6N2E2_842 0.69 +0.4 987,348 + Pf6N2E2_842 0.69 -0.8 987,349 - Pf6N2E2_842 0.69 -1.8 987,349 - Pf6N2E2_842 0.69 +0.6 987,456 + Pf6N2E2_842 0.84 -0.6 987,456 + Pf6N2E2_842 0.84 +0.6 987,456 + Pf6N2E2_842 0.84 +0.7 987,457 - Pf6N2E2_842 0.84 +1.2 987,457 - Pf6N2E2_842 0.84 +1.7 987,457 - Pf6N2E2_842 0.84 +1.1 987,478 - Pf6N2E2_842 0.87 +0.2 987,557 + +0.7 987,557 + +0.5 987,557 + -1.1 987,558 - -0.4 987,558 - -0.7 987,558 - +2.6 987,558 - +1.2 987,558 - +1.6 987,558 - -0.1 987,564 + +0.3 987,564 + +0.2 987,564 + -1.3 987,565 - +1.1 987,565 - +0.4 987,565 - +0.9 987,565 - -0.6 987,565 - +1.3 987,565 - +2.0 987,733 + -0.9 987,734 - +0.3 987,734 - +1.3 987,734 - +0.8 987,734 - -0.8 987,796 + Pf6N2E2_843 0.13 -0.2 987,796 + Pf6N2E2_843 0.13 -0.8 987,796 + Pf6N2E2_843 0.13 -0.3 987,796 + Pf6N2E2_843 0.13 +0.3 987,796 + Pf6N2E2_843 0.13 +0.1 987,796 + Pf6N2E2_843 0.13 +2.6 987,796 + Pf6N2E2_843 0.13 +0.1 987,796 + Pf6N2E2_843 0.13 +0.9 987,796 + Pf6N2E2_843 0.13 +0.7 987,797 - Pf6N2E2_843 0.13 +1.4 987,797 - Pf6N2E2_843 0.13 -0.2 987,797 - Pf6N2E2_843 0.13 +0.7 987,797 - Pf6N2E2_843 0.13 -1.8 987,797 - Pf6N2E2_843 0.13 +1.2 987,797 - Pf6N2E2_843 0.13 -0.0 987,797 - Pf6N2E2_843 0.13 +0.3 987,906 - Pf6N2E2_843 0.20 +0.9 987,906 - Pf6N2E2_843 0.20 +1.1 987,921 + Pf6N2E2_843 0.20 +0.9 987,921 + Pf6N2E2_843 0.20 -0.5 987,922 - Pf6N2E2_843 0.20 -0.9 987,922 - Pf6N2E2_843 0.20 -0.7 987,922 - Pf6N2E2_843 0.20 -0.8 987,922 - Pf6N2E2_843 0.20 +1.6 987,922 - Pf6N2E2_843 0.20 +1.2 987,922 - Pf6N2E2_843 0.20 +0.4 987,995 + Pf6N2E2_843 0.25 -0.6 987,995 + Pf6N2E2_843 0.25 +1.9 987,995 + Pf6N2E2_843 0.25 -1.6 987,996 - Pf6N2E2_843 0.25 +2.3 987,996 - Pf6N2E2_843 0.25 -0.9 987,996 - Pf6N2E2_843 0.25 +1.9 987,996 - Pf6N2E2_843 0.25 -1.6 987,997 + Pf6N2E2_843 0.25 -2.6 987,997 + Pf6N2E2_843 0.25 +0.2 987,998 - Pf6N2E2_843 0.25 +0.0 988,061 + Pf6N2E2_843 0.28 -0.1 988,061 + Pf6N2E2_843 0.28 +0.4 988,061 + Pf6N2E2_843 0.28 +0.2 988,061 + Pf6N2E2_843 0.28 -1.8 988,062 - Pf6N2E2_843 0.28 -1.3 988,062 - Pf6N2E2_843 0.28 -0.7 988,149 - Pf6N2E2_843 0.33 -1.0 988,233 + Pf6N2E2_843 0.38 +0.8 988,233 + Pf6N2E2_843 0.38 -1.5 988,233 + Pf6N2E2_843 0.38 -0.3 988,233 + Pf6N2E2_843 0.38 -1.1 988,234 - Pf6N2E2_843 0.38 -0.4 988,304 + Pf6N2E2_843 0.42 +0.6 988,305 - Pf6N2E2_843 0.42 -1.5 988,367 - Pf6N2E2_843 0.46 +0.1 988,379 + Pf6N2E2_843 0.46 +1.1 988,380 - Pf6N2E2_843 0.46 +0.2 988,458 + Pf6N2E2_843 0.51 +0.0
Or see this region's nucleotide sequence