Experiment: sodium iodate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_590 and Pf6N2E2_591 are separated by 327 nucleotides Pf6N2E2_591 and Pf6N2E2_592 overlap by 35 nucleotides Pf6N2E2_592 and Pf6N2E2_593 are separated by 86 nucleotides
Pf6N2E2_590 - DNA polymerase III epsilon subunit (EC 2.7.7.7), at 667,357 to 668,118
_590
Pf6N2E2_591 - Streptothricin acetyltransferase, Streptomyces lavendulae type, at 668,446 to 669,060
_591
Pf6N2E2_592 - Transcriptional regulators, LysR family, at 669,026 to 669,919
_592
Pf6N2E2_593 - FIG00958166: hypothetical protein, at 670,006 to 670,269
_593
Position (kb) 668
669
670 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 668.128 kb on - strand at 668.128 kb on - strand at 668.154 kb on + strand at 668.154 kb on + strand at 668.154 kb on + strand at 668.154 kb on + strand at 668.155 kb on - strand at 668.155 kb on - strand at 668.155 kb on - strand at 668.158 kb on + strand at 668.158 kb on + strand at 668.158 kb on + strand at 668.158 kb on + strand at 668.158 kb on + strand at 668.159 kb on - strand at 668.159 kb on - strand at 668.159 kb on - strand at 668.159 kb on - strand at 668.159 kb on - strand at 668.159 kb on - strand at 668.201 kb on - strand at 668.285 kb on - strand at 668.329 kb on + strand at 668.329 kb on + strand at 668.330 kb on - strand at 668.330 kb on - strand at 668.330 kb on - strand at 668.445 kb on + strand at 668.446 kb on - strand at 668.446 kb on - strand at 668.446 kb on - strand at 668.446 kb on - strand at 668.515 kb on + strand, within Pf6N2E2_591 at 668.515 kb on + strand, within Pf6N2E2_591 at 668.516 kb on - strand, within Pf6N2E2_591 at 668.517 kb on + strand, within Pf6N2E2_591 at 668.517 kb on + strand, within Pf6N2E2_591 at 668.518 kb on - strand, within Pf6N2E2_591 at 668.518 kb on - strand, within Pf6N2E2_591 at 668.518 kb on - strand, within Pf6N2E2_591 at 668.518 kb on - strand, within Pf6N2E2_591 at 668.518 kb on - strand, within Pf6N2E2_591 at 668.518 kb on - strand, within Pf6N2E2_591 at 668.626 kb on + strand, within Pf6N2E2_591 at 668.626 kb on + strand, within Pf6N2E2_591 at 668.627 kb on - strand, within Pf6N2E2_591 at 668.692 kb on + strand, within Pf6N2E2_591 at 668.693 kb on - strand, within Pf6N2E2_591 at 668.693 kb on - strand, within Pf6N2E2_591 at 668.917 kb on + strand, within Pf6N2E2_591 at 668.918 kb on - strand, within Pf6N2E2_591 at 668.968 kb on - strand, within Pf6N2E2_591 at 669.121 kb on - strand, within Pf6N2E2_592 at 669.302 kb on - strand, within Pf6N2E2_592 at 669.344 kb on + strand, within Pf6N2E2_592 at 669.345 kb on - strand, within Pf6N2E2_592 at 669.345 kb on - strand, within Pf6N2E2_592 at 669.382 kb on - strand, within Pf6N2E2_592 at 669.382 kb on - strand, within Pf6N2E2_592 at 669.382 kb on - strand, within Pf6N2E2_592 at 669.634 kb on + strand, within Pf6N2E2_592 at 669.635 kb on - strand, within Pf6N2E2_592 at 669.657 kb on + strand, within Pf6N2E2_592 at 669.705 kb on + strand, within Pf6N2E2_592 at 669.912 kb on - strand at 669.997 kb on - strand at 670.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium iodate 0.005 M remove 668,128 - -1.0 668,128 - -1.1 668,154 + -0.0 668,154 + -1.5 668,154 + -0.6 668,154 + +0.6 668,155 - +0.7 668,155 - -0.4 668,155 - +1.0 668,158 + -1.0 668,158 + +0.5 668,158 + -0.5 668,158 + +1.1 668,158 + +0.0 668,159 - -0.1 668,159 - +0.8 668,159 - +0.5 668,159 - -1.1 668,159 - +0.3 668,159 - +0.3 668,201 - -1.1 668,285 - -0.8 668,329 + +0.3 668,329 + +0.8 668,330 - +0.5 668,330 - +1.9 668,330 - +0.2 668,445 + +0.7 668,446 - +0.3 668,446 - +0.3 668,446 - +0.9 668,446 - -0.5 668,515 + Pf6N2E2_591 0.11 -2.3 668,515 + Pf6N2E2_591 0.11 -1.9 668,516 - Pf6N2E2_591 0.11 -1.3 668,517 + Pf6N2E2_591 0.12 -1.4 668,517 + Pf6N2E2_591 0.12 +1.8 668,518 - Pf6N2E2_591 0.12 -0.4 668,518 - Pf6N2E2_591 0.12 -0.3 668,518 - Pf6N2E2_591 0.12 +1.1 668,518 - Pf6N2E2_591 0.12 -2.3 668,518 - Pf6N2E2_591 0.12 +0.0 668,518 - Pf6N2E2_591 0.12 -1.1 668,626 + Pf6N2E2_591 0.29 -0.9 668,626 + Pf6N2E2_591 0.29 +1.0 668,627 - Pf6N2E2_591 0.29 -1.0 668,692 + Pf6N2E2_591 0.40 +1.2 668,693 - Pf6N2E2_591 0.40 -0.7 668,693 - Pf6N2E2_591 0.40 -3.0 668,917 + Pf6N2E2_591 0.77 -1.2 668,918 - Pf6N2E2_591 0.77 +1.7 668,968 - Pf6N2E2_591 0.85 +0.3 669,121 - Pf6N2E2_592 0.11 -0.8 669,302 - Pf6N2E2_592 0.31 +0.2 669,344 + Pf6N2E2_592 0.36 +1.0 669,345 - Pf6N2E2_592 0.36 +1.0 669,345 - Pf6N2E2_592 0.36 -0.3 669,382 - Pf6N2E2_592 0.40 +2.9 669,382 - Pf6N2E2_592 0.40 -1.7 669,382 - Pf6N2E2_592 0.40 +0.4 669,634 + Pf6N2E2_592 0.68 -1.0 669,635 - Pf6N2E2_592 0.68 -0.4 669,657 + Pf6N2E2_592 0.71 +1.1 669,705 + Pf6N2E2_592 0.76 -0.1 669,912 - +0.3 669,997 - -2.0 670,015 + +0.7
Or see this region's nucleotide sequence