Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5488

Experiment: sodium iodate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium iodate 0.005 M
6,304,764	-		Pf6N2E2_5487	0.27	+1.1
6,304,967	+		Pf6N2E2_5487	0.42	-0.1
6,304,967	+		Pf6N2E2_5487	0.42	+1.3
6,304,967	+		Pf6N2E2_5487	0.42	+0.5
6,305,034	+		Pf6N2E2_5487	0.47	+1.2
6,305,775	+				+1.0
6,306,252	-		Pf6N2E2_5488	0.30	+0.2
6,306,289	+		Pf6N2E2_5488	0.32	+0.1
6,306,289	+		Pf6N2E2_5488	0.32	+0.5
6,306,289	+		Pf6N2E2_5488	0.32	+0.2
6,306,290	-		Pf6N2E2_5488	0.32	-2.7
6,306,290	-		Pf6N2E2_5488	0.32	+0.7
6,306,290	-		Pf6N2E2_5488	0.32	+0.5
6,306,290	-		Pf6N2E2_5488	0.32	+0.4
6,306,462	-		Pf6N2E2_5488	0.42	+0.6
6,306,462	-		Pf6N2E2_5488	0.42	-1.1
6,306,593	+		Pf6N2E2_5488	0.49	-1.8
6,306,679	+		Pf6N2E2_5488	0.54	+0.4
6,306,680	-		Pf6N2E2_5488	0.54	+0.0
6,306,723	-		Pf6N2E2_5488	0.56	+0.8
6,306,781	+		Pf6N2E2_5488	0.60	+0.8
6,306,782	-		Pf6N2E2_5488	0.60	+0.6
6,307,009	+		Pf6N2E2_5488	0.73	+1.4
6,307,009	+		Pf6N2E2_5488	0.73	-0.6
6,307,010	-		Pf6N2E2_5488	0.73	+0.8
6,307,010	-		Pf6N2E2_5488	0.73	+0.1
6,307,081	+		Pf6N2E2_5488	0.77	+0.3
6,307,082	-		Pf6N2E2_5488	0.77	+0.6
6,307,096	+		Pf6N2E2_5488	0.77	+1.2
6,307,096	+		Pf6N2E2_5488	0.77	+0.4
6,307,096	+		Pf6N2E2_5488	0.77	-1.7
6,307,096	+		Pf6N2E2_5488	0.77	+0.4
6,307,096	+		Pf6N2E2_5488	0.77	-0.1
6,307,097	-		Pf6N2E2_5488	0.78	+0.9
6,307,097	-		Pf6N2E2_5488	0.78	-0.5
6,307,097	-		Pf6N2E2_5488	0.78	+0.4
6,307,097	-		Pf6N2E2_5488	0.78	-1.5
6,307,111	+		Pf6N2E2_5488	0.78	+1.6
6,307,111	+		Pf6N2E2_5488	0.78	+0.2
6,307,111	+		Pf6N2E2_5488	0.78	+0.2
6,307,111	+		Pf6N2E2_5488	0.78	+0.8
6,307,111	+		Pf6N2E2_5488	0.78	+2.1
6,307,111	+		Pf6N2E2_5488	0.78	+0.4
6,307,111	+		Pf6N2E2_5488	0.78	+1.1
6,307,111	+		Pf6N2E2_5488	0.78	-2.1
6,307,111	+		Pf6N2E2_5488	0.78	-1.3
6,307,111	+		Pf6N2E2_5488	0.78	+0.7
6,307,111	+		Pf6N2E2_5488	0.78	+0.6
6,307,111	+		Pf6N2E2_5488	0.78	-1.4
6,307,111	+		Pf6N2E2_5488	0.78	-0.9
6,307,112	-		Pf6N2E2_5488	0.78	-0.5
6,307,112	-		Pf6N2E2_5488	0.78	+0.3
6,307,112	-		Pf6N2E2_5488	0.78	-0.5
6,307,112	-		Pf6N2E2_5488	0.78	-0.4
6,307,112	-		Pf6N2E2_5488	0.78	+0.2
6,307,112	-		Pf6N2E2_5488	0.78	+1.0
6,307,112	-		Pf6N2E2_5488	0.78	+1.1
6,307,112	-		Pf6N2E2_5488	0.78	-0.4
6,307,224	+		Pf6N2E2_5488	0.85	-0.2
6,307,224	+		Pf6N2E2_5488	0.85	-1.4
6,307,224	+		Pf6N2E2_5488	0.85	-1.3
6,307,224	+		Pf6N2E2_5488	0.85	+0.1
6,307,224	+		Pf6N2E2_5488	0.85	+1.0
6,307,225	-		Pf6N2E2_5488	0.85	+0.2
6,307,225	-		Pf6N2E2_5488	0.85	+0.5
6,307,225	-		Pf6N2E2_5488	0.85	-1.1
6,307,225	-		Pf6N2E2_5488	0.85	+1.5
6,307,225	-		Pf6N2E2_5488	0.85	+1.7
6,307,225	-		Pf6N2E2_5488	0.85	-0.0
6,307,269	+		Pf6N2E2_5488	0.87	-0.6
6,307,269	+		Pf6N2E2_5488	0.87	-0.5
6,307,270	-		Pf6N2E2_5488	0.87	-0.4
6,307,270	-		Pf6N2E2_5488	0.87	+1.1
6,307,270	-		Pf6N2E2_5488	0.87	+0.3
6,307,270	-		Pf6N2E2_5488	0.87	+0.4
6,307,342	+				+0.8
6,307,342	+				+0.1
6,307,456	+				-0.4
6,307,456	+				-0.0
6,307,457	-				-1.2
6,307,475	+				+0.6
6,307,481	+				+0.0
6,307,481	+				+0.3
6,307,481	+				+1.4
6,307,482	-				-0.8
6,307,482	-				+0.6
6,307,563	+				+0.9
6,307,563	+				+0.5
6,307,563	+				-2.3
6,307,564	-				+1.5
6,307,739	+				+0.1
6,307,739	+				-0.2
6,307,740	-				-0.3